8K9G | pdb_00008k9g

Cryo-EM structure of Crt-SPARTA-gRNA-tDNA dimer (conformation-1)

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
G [auth E]Cullin_ABe8k9gE1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (v294.1)
E [auth A]Cullin_ABe8k9gA1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
F [auth B],
H [auth F]		PF13676TIR domain (TIR_2)TIR domainThis is a family of Toll-like receptors. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B [auth C],
D [auth G]		RNA (5'-R(P*UP*GP*AP*GP*GP*UP*AP*GP*UP*AP*GP*GP*UP*UP*GP*UP*AP*UP*AP*GP*U)-3')---
F [auth B],
H [auth F]		TIR domain-containing protein -
E [auth A],
G [auth E]		Piwi domain-containing protein - -
A [auth D],
C [auth H]		DNA (45-mer)---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
F [auth B],
H [auth F]		IPR000157Toll/interleukin-1 receptor homology (TIR) domainDomain
F [auth B],
H [auth F]		IPR035897Toll/interleukin-1 receptor homology (TIR) domain superfamilyHomologous Superfamily
E [auth A],
G [auth E]		IPR036397Ribonuclease H superfamilyHomologous Superfamily
E [auth A],
G [auth E]		IPR012337Ribonuclease H-like superfamilyHomologous Superfamily