8H3S | pdb_00008h3s

Substrate-bound EP, polyA model


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
CSCOP2B SuperfamilyTrypsin-like serine proteases 8042115 3000114 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
C7tm_1e8h3sC1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: 7tm_1ECOD (v295)
B7tm_1e8h3sB1 A: alpha arraysX: cradle loop barrelH: Cytochrome P450T: Cytochrome P450F: 7tm_1ECOD (v295)
ARuvB_Ce8h3sA1 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: RuvB_CECOD (v295)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00089Trypsin (Trypsin)TrypsinDomain
PF00089Trypsin (Trypsin)TrypsinDomain
PF15494Scavenger receptor cysteine-rich domain (SRCR_2)Scavenger receptor cysteine-rich domainSRCR_2 is a scavenger receptor cysteine-rich domain family found largely on vertebrate sequences up-stream of the trypsin-like transmembrane serine protease, Spinesin. Domain
PF00629MAM domain, meprin/A5/mu (MAM)MAM domain, meprin/A5/muAn extracellular domain found in many receptors [1]. The MAM domain along with the associated Ig domain in type IIB receptor protein tyrosine phosphatases forms a structural unit (termed MIg) with a seamless interdomain interface. It plays a major ro ...An extracellular domain found in many receptors [1]. The MAM domain along with the associated Ig domain in type IIB receptor protein tyrosine phosphatases forms a structural unit (termed MIg) with a seamless interdomain interface. It plays a major role in homodimerisation of the phosphatase ectoprotein and in cell adhesion [2,3]. MAM is a beta-sandwich consisting of two five-stranded antiparallel beta-sheets rotated away from each other by approx 25 degrees, and plays a similar role in meprin metalloproteinases [4].
Domain
PF00431CUB domain (CUB)CUB domainDomain
PF00057Low-density lipoprotein receptor domain class A (Ldl_recept_a)Low-density lipoprotein receptor domain class A- Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Serine protease 1
Enteropeptidase catalytic light chain
Enteropeptidase non-catalytic heavy chain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR009003Peptidase S1, PA clanHomologous Superfamily
IPR001314Peptidase S1A, chymotrypsin familyFamily
IPR033116Serine proteases, trypsin family, serine active siteActive Site
IPR001254Serine proteases, trypsin domainDomain
IPR018114Serine protease-like, trypsin family, histidine active siteActive Site
IPR050127Serine Proteases (Peptidase S1 Family)Family
IPR043504Peptidase_S1_PA_chymotrypsinUnknown
IPR002172Low-density lipoprotein (LDL) receptor class A repeatRepeat
IPR009003Peptidase S1, PA clanHomologous Superfamily
IPR001190SRCR domainDomain
IPR001314Peptidase S1A, chymotrypsin familyFamily
IPR033116Serine proteases, trypsin family, serine active siteActive Site
IPR035914Spermadhesin, CUB domain superfamilyHomologous Superfamily
IPR013320Concanavalin A-like lectin/glucanase domain superfamilyHomologous Superfamily
IPR036772SRCR-like domain superfamilyHomologous Superfamily
IPR001254Serine proteases, trypsin domainDomain
IPR000998MAM domainDomain
IPR023415Low-density lipoprotein (LDL) receptor class A, conserved siteConserved Site
IPR018114Serine protease-like, trypsin family, histidine active siteActive Site
IPR036055LDL receptor-like superfamilyHomologous Superfamily
IPR036364SEA domain superfamilyHomologous Superfamily
IPR000859CUB domainDomain
IPR011163Peptidase S1A, enteropeptidaseFamily
IPR000082SEA domainDomain
IPR043504Peptidase_S1_PA_chymotrypsinUnknown
IPR002172Low-density lipoprotein (LDL) receptor class A repeatRepeat
IPR009003Peptidase S1, PA clanHomologous Superfamily
IPR001190SRCR domainDomain
IPR001314Peptidase S1A, chymotrypsin familyFamily
IPR033116Serine proteases, trypsin family, serine active siteActive Site
IPR035914Spermadhesin, CUB domain superfamilyHomologous Superfamily
IPR013320Concanavalin A-like lectin/glucanase domain superfamilyHomologous Superfamily
IPR036772SRCR-like domain superfamilyHomologous Superfamily
IPR001254Serine proteases, trypsin domainDomain
IPR000998MAM domainDomain
IPR023415Low-density lipoprotein (LDL) receptor class A, conserved siteConserved Site
IPR018114Serine protease-like, trypsin family, histidine active siteActive Site
IPR036055LDL receptor-like superfamilyHomologous Superfamily
IPR036364SEA domain superfamilyHomologous Superfamily
IPR000859CUB domainDomain
IPR011163Peptidase S1A, enteropeptidaseFamily
IPR000082SEA domainDomain
IPR043504Peptidase_S1_PA_chymotrypsinUnknown