8E3Q
CRYO-EM STRUCTURE OF the human MPSF
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth C] | F_UNCLASSIFIED | e8e3qC1 | A: few secondary structure elements | X: CCCH zinc finger | H: CCCH zinc finger (From Topology) | T: CCCH zinc finger | F: F_UNCLASSIFIED | ECOD (1.6) |
A | PF03178 | e8e3qA3 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: PF03178 | ECOD (1.6) |
A | PF10433 | e8e3qA1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: PF10433 | ECOD (1.6) |
A | PF03178 | e8e3qA4 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF03178 | ECOD (1.6) |
C [auth B] | PF00400 | e8e3qB1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: PF00400 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
B [auth C] | PF15663 | Zinc-finger containing family (zf-CCCH_3) | Zinc-finger containing family | - | Family |
PF10433 | Mono-functional DNA-alkylating methyl methanesulfonate N-term (MMS1_N) | Mono-functional DNA-alkylating methyl methanesulfonate N-term | - | Repeat | |
PF03178 | CPSF A subunit region (CPSF_A) | CPSF A subunit region | - | Repeat | |
C [auth B] | PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
B [auth C] | IPR036875 | Zinc finger, CCHC-type superfamily | Homologous Superfamily |
B [auth C] | IPR000571 | Zinc finger, CCCH-type | Domain |
B [auth C] | IPR036855 | Zinc finger, CCCH-type superfamily | Homologous Superfamily |
B [auth C] | IPR041686 | Zinc-finger CCCH domain | Domain |
B [auth C] | IPR001878 | Zinc finger, CCHC-type | Domain |
B [auth C] | IPR045348 | CPSF complex subunit CPSF4-like | Family |
IPR018846 | Cleavage/polyadenylation specificity factor, A subunit, N-terminal | Domain | |
IPR015943 | WD40/YVTN repeat-like-containing domain superfamily | Homologous Superfamily | |
IPR004871 | Cleavage/polyadenylation specificity factor, A subunit, C-terminal | Domain | |
C [auth B] | IPR008160 | Collagen triple helix repeat | Repeat |
C [auth B] | IPR045245 | Pre-mRNA 3' end processing protein Pfs2-like | Family |
C [auth B] | IPR036322 | WD40-repeat-containing domain superfamily | Homologous Superfamily |
C [auth B] | IPR001680 | WD40 repeat | Repeat |
C [auth B] | IPR015943 | WD40/YVTN repeat-like-containing domain superfamily | Homologous Superfamily |