CRYO-EM STRUCTURE OF the human MPSF
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C [auth B] | ANAPC4_WD40_8 | e8e3qB1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: ANAPC4_WD40_8 | ECOD (1.6) |
| B [auth C] | Torus | e8e3qC1 | A: few secondary structure elements | X: CCCH zinc finger | H: CCCH zinc finger (From Topology) | T: CCCH zinc finger | F: Torus | ECOD (1.6) |
| A | CPSF_A_N | e8e3qA3 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: CPSF_A_N | ECOD (1.6) |
| A | MMS1_N_C | e8e3qA1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: MMS1_N_C | ECOD (1.6) |
| A | MMS1_N_N | e8e3qA2 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: MMS1_N_N | ECOD (1.6) |
| A | CPSF_A_C | e8e3qA4 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: CPSF_A_C | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 2.130.10.10 | Mainly Beta | 7 Propeller | Methylamine Dehydrogenase | Chain H | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| C [auth B] | PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat |
| B [auth C] | PF15663 | Zinc-finger containing family (zf-CCCH_3) | Zinc-finger containing family | - | Family |
| PF10433 | RSE1/DDB1/CPSF1 first beta-propeller (Beta-prop_RSE1_1st) | RSE1/DDB1/CPSF1 first beta-propeller | - | Repeat | |
| PF03178 | CPSF A subunit region (CPSF_A) | CPSF A subunit region | - | Repeat |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| C [auth B] | IPR008160 | Collagen triple helix repeat | Repeat |
| C [auth B] | IPR045245 | Pre-mRNA 3' end processing protein Pfs2-like | Family |
| C [auth B] | IPR036322 | WD40-repeat-containing domain superfamily | Homologous Superfamily |
| C [auth B] | IPR001680 | WD40 repeat | Repeat |
| C [auth B] | IPR015943 | WD40/YVTN repeat-like-containing domain superfamily | Homologous Superfamily |
| B [auth C] | IPR036875 | Zinc finger, CCHC-type superfamily | Homologous Superfamily |
| B [auth C] | IPR000571 | Zinc finger, CCCH-type | Domain |
| B [auth C] | IPR036855 | Zinc finger, CCCH-type superfamily | Homologous Superfamily |
| B [auth C] | IPR041686 | Zinc-finger CCCH domain | Domain |
| B [auth C] | IPR001878 | Zinc finger, CCHC-type | Domain |
| B [auth C] | IPR045348 | CPSF complex subunit CPSF4-like | Family |
| IPR050358 | RSE1/DDB1/CPSF1 | Family | |
| IPR018846 | RSE1/DDB1/CPSF1, first beta-propeller | Domain | |
| IPR004871 | RSE1/DDB1/CPSF1, C-terminal | Domain | |
| IPR015943 | WD40/YVTN repeat-like-containing domain superfamily | Homologous Superfamily |














