8DL5 | pdb_00008dl5

Crystal structure of PLP-dependent Mannich cyclase LolT

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Be8dl5B1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF:ECOD (v294.1)
BMRS2-likee8dl5B2 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: MRS2-likeECOD (v294.1)
APolyketide_cyc2e8dl5A1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Polyketide_cyc2ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF00266Aminotransferase class-V (Aminotran_5)Aminotransferase class-VThis domain is found in amino transferases, and other enzymes including cysteine desulphurase EC:4.4.1.-. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Aminotransferase, class V/Cysteine desulfurase - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR015424Pyridoxal phosphate-dependent transferaseHomologous Superfamily
A, B
IPR015421Pyridoxal phosphate-dependent transferase, major domainHomologous Superfamily
A, B
IPR000192Aminotransferase class V domainDomain

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
A, B
LLP Parent Component: LYS

RESID:  AA0119

PSI-MOD :  N6-pyridoxal phosphate-L-lysine MOD:00128