8D4I | pdb_00008d4i

Structure of Y430F D-ornithine/D-lysine decarboxylase complex with putrescine


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
B [auth C]e8d4iC1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT:F:ECOD (20:10:01)
Ae8d4iA1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT:F:ECOD (20:10:01)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
B [auth C]
PF02784Pyridoxal-dependent decarboxylase, pyridoxal binding domain (Orn_Arg_deC_N)Pyridoxal-dependent decarboxylase, pyridoxal binding domainThese pyridoxal-dependent decarboxylases acting on ornithine, lysine, arginine and related substrates This domain has a TIM barrel fold. Domain
A,
B [auth C]
PF00278Pyridoxal-dependent decarboxylase, C-terminal sheet domain (Orn_DAP_Arg_deC)Pyridoxal-dependent decarboxylase, C-terminal sheet domainThese pyridoxal-dependent decarboxylases act on ornithine, lysine, arginine and related substrates. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
A,
B [auth C]
LLP Parent Component: LYS

RESIDAA0119

PSI-MOD :  N6-pyridoxal phosphate-L-lysine MOD:00128