8AH2 | pdb_00008ah2

Crystal structure of human 14-3-3 zeta fused to the NPM1 peptide including phosphoserine-48

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations
Protein Modification Annotation

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	14-3-3 protein	8034961	3001329	SCOP2B (2022-06-29)
B [auth C]	SCOP2B Superfamily	14-3-3 protein	8034961	3001329	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	14-3-3	e8ah2A1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: 14-3-3	ECOD (1.6)
B [auth C]	14-3-3	e8ah2C1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: 14-3-3	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.20.190.20	Mainly Alpha	Up-down Bundle	Delta-Endotoxin	domain 1	CATH (utative)
B [auth C]	1.20.190.20	Mainly Alpha	Up-down Bundle	Delta-Endotoxin	domain 1	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B [auth C]	PF00244	14-3-3 protein (14-3-3)	14-3-3 protein	-	Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B [auth C]	14-3-3 protein zeta/delta,Nucleophosmin	protein binding binding histone binding transcription factor binding RNA polymerase II-specific DNA-binding transcription factor binding DNA-binding transcription factor binding NF-kappaB binding RNA binding rRNA binding nucleic acid binding DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding protein binding binding histone binding transcription factor binding RNA polymerase II-specific DNA-binding transcription factor binding DNA-binding transcription factor binding NF-kappaB binding RNA binding rRNA binding nucleic acid binding DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding double-stranded DNA binding core promoter sequence-specific DNA binding transcription regulatory region nucleic acid binding ribonucleoprotein complex binding protein-containing complex binding ribosomal large subunit binding ribosome binding molecular adaptor activity enzyme regulator activity protein kinase inhibitor activity molecular function inhibitor activity molecular function regulator activity enzyme inhibitor activity protein kinase regulator activity kinase inhibitor activity kinase regulator activity chromatin binding transcription coactivator activity transcription regulator activity transcription coregulator activity protein-macromolecule adaptor activity Tat protein binding unfolded protein binding identical protein binding protein homodimerization activity protein dimerization activity kinase binding enzyme binding protein kinase binding ribosomal small subunit binding protein domain specific binding phosphoprotein binding phosphoserine residue binding protein phosphorylated amino acid binding molecular sequestering activity protein sequestering activity protein phosphatase binding phosphatase binding transmembrane transporter binding cell adhesion molecule binding cadherin binding ubiquitin protein ligase binding ubiquitin-like protein ligase binding	regulation of cellular process negative regulation of biological process regulation of mRNA splicing, via spliceosome mRNA processing regulation of primary metabolic process nucleobase-containing compound metabolic process regulation of RNA metabolic process negative regulation of mRNA splicing, via spliceosome negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process RNA processing negative regulation of mRNA processing regulation of biological process negative regulation of metabolic process regulation of cellular process negative regulation of biological process regulation of mRNA splicing, via spliceosome mRNA processing regulation of primary metabolic process nucleobase-containing compound metabolic process regulation of RNA metabolic process negative regulation of mRNA splicing, via spliceosome negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process RNA processing negative regulation of mRNA processing regulation of biological process negative regulation of metabolic process primary metabolic process regulation of gene expression negative regulation of gene expression biosynthetic process negative regulation of macromolecule biosynthetic process metabolic process regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of metabolic process negative regulation of RNA metabolic process RNA metabolic process RNA biosynthetic process nucleic acid biosynthetic process negative regulation of mRNA metabolic process negative regulation of cellular process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of mRNA processing RNA splicing biological regulation regulation of macromolecule metabolic process gene expression nucleobase-containing compound biosynthetic process regulation of RNA splicing mRNA metabolic process macromolecule biosynthetic process nucleic acid metabolic process negative regulation of RNA splicing RNA splicing, via transesterification reactions negative regulation of biosynthetic process mRNA splicing, via spliceosome cellular process RNA splicing, via transesterification reactions with bulged adenosine as nucleophile regulation of mRNA metabolic process regulation of protein modification process regulation of catalytic activity regulation of protein phosphorylation negative regulation of phosphate metabolic process negative regulation of catalytic activity regulation of transferase activity negative regulation of kinase activity phosphate-containing compound metabolic process negative regulation of protein modification process protein metabolic process phosphorus metabolic process protein modification process negative regulation of protein metabolic process protein phosphorylation phosphorylation negative regulation of protein kinase activity by regulation of protein phosphorylation regulation of protein metabolic process negative regulation of molecular function negative regulation of protein kinase activity regulation of protein kinase activity regulation of molecular function regulation of kinase activity negative regulation of protein phosphorylation macromolecule modification negative regulation of phosphorus metabolic process regulation of phosphorylation regulation of phosphorus metabolic process negative regulation of phosphorylation cell cycle G2/M phase transition regulation of cell cycle phase transition regulation of cell cycle process positive regulation of biological process regulation of cell cycle G2/M phase transition cell cycle phase transition positive regulation of cell cycle G2/M phase transition positive regulation of cell cycle positive regulation of cell cycle phase transition positive regulation of cell cycle process cell cycle regulation of cell cycle positive regulation of cellular process cell cycle process regulation of protein stability regulation of biological quality protein stabilization localization macromolecule localization intracellular protein localization regulation of cellular component organization positive regulation of centrosome duplication microtubule cytoskeleton organization cellular component organization centrosome duplication centrosome cycle cellular component organization or biogenesis microtubule organizing center organization regulation of centrosome cycle regulation of microtubule-based process organelle organization regulation of centrosome duplication microtubule-based process cytoskeleton organization regulation of ribonuclease activity regulation of endoribonuclease activity cellular localization nucleocytoplasmic transport transport nuclear transport establishment of localization in cell intracellular transport establishment of localization regulation of growth growth regulation of cell growth cell growth establishment of protein localization nitrogen compound transport protein localization to nucleus import into nucleus establishment of protein localization to organelle protein transport protein localization to organelle protein import into nucleus intracellular protein transport cellular response to stimulus cellular response to stress response to stimulus response to stress cellular senescence regulation of localization regulation of protein localization positive regulation of protein localization to nucleolus positive regulation of protein localization to nucleus regulation of protein localization to nucleus protein localization to nucleolus positive regulation of protein localization regulation of protein localization to nucleolus positive regulation of DNA-binding transcription factor activity positive regulation of NF-kappaB transcription factor activity positive regulation of molecular function DNA-templated transcription regulation of RNA biosynthetic process regulation of DNA-binding transcription factor activity regulation of DNA-templated transcription DNA metabolic process DNA damage response DNA repair regulation of mRNA stability involved in cellular response to UV cellular response to environmental stimulus post-transcriptional regulation of gene expression cellular response to light stimulus RNA catabolic process mRNA catabolic process cellular response to radiation response to UV nucleobase-containing compound catabolic process nucleic acid catabolic process response to abiotic stimulus cellular response to abiotic stimulus response to light stimulus catabolic process macromolecule catabolic process regulation of mRNA catabolic process regulation of catabolic process regulation of mRNA stability regulation of RNA stability response to radiation cellular response to UV positive regulation of DNA-templated transcription positive regulation of macromolecule biosynthetic process positive regulation of metabolic process transcription by RNA polymerase II positive regulation of biosynthetic process positive regulation of macromolecule metabolic process regulation of transcription by RNA polymerase II positive regulation of transcription by RNA polymerase II positive regulation of RNA metabolic process positive regulation of RNA biosynthetic process cellular response to nitrogen compound regulation of cellular response to stress regulation of translational initiation by eIF2 alpha phosphorylation protein biosynthetic process translational initiation cellular response to dsRNA regulation of translational initiation response to nitrogen compound regulation of response to stimulus response to chemical regulation of translation in response to stress regulation of response to stress regulation of eIF2 alpha phosphorylation by dsRNA response to dsRNA translation cellular response to chemical stimulus regulation of translation regulation of translational initiation in response to stress membraneless organelle assembly cellular component biogenesis cellular component assembly regulation of centriole replication centriole replication centriole assembly organelle assembly regulation of cellular component biogenesis regulation of organelle organization regulation of organelle assembly establishment of organelle localization ribonucleoprotein complex biogenesis ribosomal subunit export from nucleus ribosome biogenesis ribosomal small subunit export from nucleus organelle localization nuclear export ribosome localization negative regulation of programmed cell death regulation of apoptotic process regulation of programmed cell death cell death negative regulation of apoptotic process apoptotic process programmed cell death regulation of endodeoxyribonuclease activity regulation of cellular component size homeostatic process cell volume homeostasis cellular homeostasis regulation of cell size regulation of anatomical structure size positive regulation of protein metabolic process regulation of protein ubiquitination positive regulation of post-translational protein modification positive regulation of protein modification process protein ubiquitination regulation of protein modification by small protein conjugation or removal positive regulation of protein modification by small protein conjugation or removal positive regulation of protein ubiquitination regulation of post-translational protein modification post-translational protein modification protein modification by small protein conjugation protein modification by small protein conjugation or removal ribosomal large subunit export from nucleus signaling regulation of signal transduction DNA damage response, signal transduction by p53 class mediator intracellular signal transduction cell communication regulation of intracellular signal transduction regulation of signal transduction by p53 class mediator signal transduction regulation of DNA damage response, signal transduction by p53 class mediator regulation of signaling signal transduction by p53 class mediator regulation of cell communication signal transduction in response to DNA damage protein-containing complex organization protein-DNA complex assembly protein-DNA complex organization chromatin organization protein-containing complex assembly chromatin remodeling nucleosome assembly nucleosome organization cell population proliferation positive regulation of cell population proliferation regulation of cell population proliferation positive regulation of translation positive regulation of gene expression ribosomal large subunit biogenesis developmental process myeloid leukocyte differentiation cellular developmental process hemopoiesis macrophage differentiation cell development mononuclear cell differentiation myeloid cell differentiation cell differentiation anatomical structure development leukocyte differentiation negative regulation of cell population proliferation regulation of cytoskeleton organization negative regulation of cell cycle negative regulation of centrosome cycle negative regulation of centrosome duplication negative regulation of cellular component organization negative regulation of cytoskeleton organization negative regulation of cell cycle process negative regulation of organelle organization ribosomal small subunit biogenesis ribosome assembly Golgi localization establishment of Golgi localization multicellular organismal process blood vessel morphogenesis tube development angiogenesis vasculature development circulatory system development anatomical structure morphogenesis multicellular organism development tube morphogenesis anatomical structure formation involved in morphogenesis blood vessel development system development cellular response to nutrient levels response to nutrient levels response to starvation cellular response to glucose starvation cellular response to starvation intracellular signaling cassette MAPK cascade ERK1 and ERK2 cascade regulation of defense response regulation of response to biotic stimulus biological process involved in interspecies interaction between organisms negative regulation of response to biotic stimulus regulation of response to external stimulus response to biotic stimulus innate immune response regulation of immune system process response to external biotic stimulus negative regulation of response to stimulus immune response response to other organism defense response regulation of innate immune response negative regulation of immune response defense response to symbiont response to external stimulus negative regulation of immune system process immune system process defense response to other organism negative regulation of response to external stimulus negative regulation of defense response regulation of immune response negative regulation of innate immune response animal organ development respiratory tube development lung development respiratory system development Golgi inheritance organelle inheritance Golgi reassembly Golgi organization endomembrane system organization regulation of developmental process nervous system development developmental maturation synapse maturation regulation of synapse organization regulation of synapse maturation cell junction organization regulation of synapse structure or activity synapse organization system process respiratory system process respiratory gaseous exchange by respiratory system protein targeting regulation of MAPK cascade regulation of ERK1 and ERK2 cascade negative regulation of signaling negative regulation of intracellular signal transduction negative regulation of cell communication negative regulation of TORC1 signaling negative regulation of TOR signaling regulation of TORC1 signaling TOR signaling regulation of TOR signaling negative regulation of signal transduction TORC1 signaling neuron recognition synaptic target recognition generation of neurons neurogenesis neuron differentiation neuron development cell recognition negative regulation of protein localization to nucleus negative regulation of protein localization negative regulation of RNA biosynthetic process negative regulation of DNA-templated transcription negative regulation of transcription by RNA polymerase II tube formation	cellular anatomical structure membrane membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle intracellular organelle lumen nuclear speck ribonucleoprotein granule intracellular organelle nuclear body nucleoplasm cellular anatomical structure membrane membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle intracellular organelle lumen nuclear speck ribonucleoprotein granule intracellular organelle nuclear body nucleoplasm organelle lumen organelle membraneless organelle supramolecular complex nuclear ribonucleoprotein granule nuclear lumen cytoplasm cytosol protein-containing complex small ribosomal subunit ribosomal subunit ribonucleoprotein complex ribosome large ribosomal subunit anchoring junction cell junction focal adhesion cell-substrate junction nucleolus granular component centrosome microtubule organizing center cytoskeleton microtubule cytoskeleton spindle pole centrosome spindle spindle pole protein-DNA complex pigment granule intracellular vesicle melanosome cytoplasmic vesicle vesicle extracellular exosome extracellular vesicle extracellular organelle extracellular region extracellular space extracellular membrane-bounded organelle synapse glutamatergic synapse blood microparticle neuron to neuron synapse hippocampal mossy fiber to CA3 synapse

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B [auth C]	IPR036824	Nucleoplasmin core domain superfamily	Homologous Superfamily
A, B [auth C]	IPR032569	Nucleophosmin, C-terminal	Domain
A, B [auth C]	IPR004301	Nucleoplasmin family	Family
A, B [auth C]	IPR024057	Nucleoplasmin core domain	Domain
A, B [auth C]	IPR023409	14-3-3 protein, conserved site	Conserved Site
A, B [auth C]	IPR023410	14-3-3 domain	Domain
A, B [auth C]	IPR036815	14-3-3 domain superfamily	Homologous Superfamily
A, B [auth C]	IPR000308	14-3-3 protein	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B [auth C]	Pharos: P63104	acute myeloid leukemia acute promyelocytic leukemia cancer lung adenocarcinoma lymphomatoid papulosis lung cancer lymphoplasmacytic lymphoma malignant glioma MALT lymphoma myopathy oligodendroglioma plasma cell myeloma psoriasis congenital anemia Disease Models, Animal acute myeloid leukemia acute promyelocytic leukemia cancer lung adenocarcinoma lymphomatoid papulosis lung cancer lymphoplasmacytic lymphoma malignant glioma MALT lymphoma myopathy oligodendroglioma plasma cell myeloma psoriasis congenital anemia Disease Models, Animal glioblastoma large cell medulloblastoma lymphatic system disease malignant colon neoplasm medulloblastoma non-Hodgkin lymphoma osteoarthritis primary cutaneous anaplastic large cell lymphoma chronic obstructive pulmonary disease subependymal giant cell astrocytoma gastric cancer hematologic disease malignant ependymoma malignant pancreatic neoplasm myeloid leukemia non-small cell lung carcinoma atypical teratoid rhabdoid tumor pancreatic ductal adenocarcinoma primitive neuroectodermal tumor diabetes mellitus gastric neoplasm hereditary diffuse gastric adenocarcinoma Mammary Neoplasms, Experimental Parkinson disease carcinoma sarcomatoid carcinoma mammary neoplasms, animal myopathy ovarian cancer paranoid schizophrenia plasma cell myeloma atypical teratoid rhabdoid tumor undifferentiated carcinoma breast carcinoma Creutzfeldt Jacob disease invasive ductal breast carcinoma lung adenocarcinoma malignant glioma pancreatic ductal adenocarcinoma primitive neuroectodermal tumor bipolar disorder glioblastoma large cell medulloblastoma lung cancer medulloblastoma oligodendroglioma pancreatic intraductal papillary-mucinous carcinoma pilocytic astrocytoma astrocytic tumor breast cancer IgA glomerulonephritis malignant ependymoma

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
A, B [auth C]	SEP	Parent Component: SER RESID: AA0037 PSI-MOD : O-phospho-L-serine MOD:00046

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.