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Peptide channel interactions in the truncated VhChiP nanopore


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AReovirus_L2_GTasee8zxiA1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Reovirus_L2_GTaseECOD (v295.2)
FReovirus_L2_GTasee8zxiF1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Reovirus_L2_GTaseECOD (v295.2)
EReovirus_L2_GTasee8zxiE1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Reovirus_L2_GTaseECOD (v295.2)
DReovirus_L2_GTasee8zxiD1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Reovirus_L2_GTaseECOD (v295.2)
CReovirus_L2_GTasee8zxiC1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Reovirus_L2_GTaseECOD (v295.2)
BReovirus_L2_GTasee8zxiB1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Reovirus_L2_GTaseECOD (v295.2)

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR050298Gram-negative bacterial outer membrane porinFamily
A, B, C, D, E
IPR033900Porin domain, Gram-negative typeDomain
A, B, C, D, E
IPR023614Porin domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR001702Porin, Gram-negative typeFamily