8ZFK | pdb_00008zfk

Caenorhabditis elegans ACR-23 in betaine and monepantel bound state

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: mpstruc

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
E	WD40	e8zfkE1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
D [auth C]	WD40	e8zfkC1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
C [auth B]	WD40	e8zfkB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
B [auth A]	WD40	e8zfkA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
A [auth D]	GFO_IDH_MocA	e8zfkD01	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: GFO_IDH_MocA	ECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth D], B [auth A], C [auth B], D [auth C], E	PF02932	Neurotransmitter-gated ion-channel transmembrane region (Neur_chan_memb)	Neurotransmitter-gated ion-channel transmembrane region	This family includes the four transmembrane helices that form the ion channel.	Domain
A [auth D], B [auth A], C [auth B], D [auth C], E	PF02931	Neurotransmitter-gated ion-channel ligand binding domain (Neur_chan_LBD)	Neurotransmitter-gated ion-channel ligand binding domain	This family is the extracellular ligand binding domain of these ion channels [1]. This domain forms a pentameric arrangement in the known structure.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth D], B [auth A], C [auth B], D [auth C], E	Betaine receptor acr-23,Soluble cytochrome b562	gated channel activity monoatomic ion channel activity excitatory extracellular ligand-gated monoatomic ion channel activity ligand-gated channel activity ligand-gated monoatomic ion channel activity extracellular ligand-gated monoatomic ion channel activity passive transmembrane transporter activity channel activity monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity transmitter-gated monoatomic ion channel activity molecular transducer activity transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential gated channel activity monoatomic ion channel activity excitatory extracellular ligand-gated monoatomic ion channel activity ligand-gated channel activity ligand-gated monoatomic ion channel activity extracellular ligand-gated monoatomic ion channel activity passive transmembrane transporter activity channel activity monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity transmitter-gated monoatomic ion channel activity molecular transducer activity transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential signaling receptor activity neurotransmitter receptor activity transmitter-gated channel activity transmembrane signaling receptor activity binding tetrapyrrole binding heme binding electron transfer activity cation binding transition metal ion binding iron ion binding ion binding metal ion binding small molecule binding	biological regulation regulation of biological quality regulation of membrane potential trans-synaptic signaling synaptic signaling regulation of biological process signaling anterograde trans-synaptic signaling cell-cell signaling cellular process chemical synaptic transmission cell communication transmembrane transport localization biological regulation regulation of biological quality regulation of membrane potential trans-synaptic signaling synaptic signaling regulation of biological process signaling anterograde trans-synaptic signaling cell-cell signaling cellular process chemical synaptic transmission cell communication transmembrane transport localization transport monoatomic ion transmembrane transport monoatomic ion transport establishment of localization electron transport chain metabolic process generation of precursor metabolites and energy	cellular anatomical structure synapse cell junction protein-containing complex transmembrane transporter complex membrane membrane protein complex transporter complex cell periphery plasma membrane postsynapse cell projection neuron projection plasma membrane bounded cell projection cellular anatomical structure synapse cell junction protein-containing complex transmembrane transporter complex membrane membrane protein complex transporter complex cell periphery plasma membrane postsynapse cell projection neuron projection plasma membrane bounded cell projection extracellular region periplasmic space

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth D], B [auth A], C [auth B], D [auth C], E	IPR018000	Neurotransmitter-gated ion-channel, conserved site	Conserved Site
A [auth D], B [auth A], C [auth B], D [auth C], E	IPR038050	Neuronal acetylcholine receptor	Homologous Superfamily
A [auth D], B [auth A], C [auth B], D [auth C], E	IPR006202	Neurotransmitter-gated ion-channel ligand-binding domain	Domain
A [auth D], B [auth A], C [auth B], D [auth C], E	IPR036719	Neurotransmitter-gated ion-channel transmembrane domain superfamily	Homologous Superfamily
A [auth D], B [auth A], C [auth B], D [auth C], E	IPR006029	Neurotransmitter-gated ion-channel transmembrane domain	Domain
A [auth D], B [auth A], C [auth B], D [auth C], E	IPR036734	Neurotransmitter-gated ion-channel ligand-binding domain superfamily	Homologous Superfamily
A [auth D], B [auth A], C [auth B], D [auth C], E	IPR006201	Neurotransmitter-gated ion-channel	Family
A [auth D], B [auth A], C [auth B], D [auth C], E	IPR010980	Cytochrome c/b562	Homologous Superfamily
A [auth D], B [auth A], C [auth B], D [auth C], E	IPR009155	Cytochrome b562	Family

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

Chains	Resource Link	Group	Subgroup	Protein
A [auth D], B [auth A], C [auth B], D [auth C], E	mpstruc	TRANSMEMBRANE PROTEINS: ALPHA-HELICAL	Cys-Loop Receptor Family	Acr-23 betaine receptor, apo form

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.