8ZDE | pdb_00008zde

Crystal structure of HsmR with DNA bound

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
FPKD_channele8zdeF1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
EPKD_channele8zdeE1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
DPKD_channele8zdeD1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
CPKD_channele8zdeC1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
BPKD_channele8zdeB1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
AIntegrin_A_Ig_2e8zdeA1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Integrin_A_Ig_2ECOD (v295.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
H, J, L
DNA (5'-D(*AP*AP*TP*GP*GP*TP*TP*TP*GP*CP*AP*TP*AP*CP*AP*AP*AP*CP*TP*AP*AP*T)-3')---
G, I, K
DNA (5'-D(*AP*TP*TP*AP*GP*TP*TP*TP*GP*TP*AP*TP*GP*CP*AP*AP*AP*CP*CP*AP*TP*T)-3')---
A, B, C, D, E
MarR-family transcriptional regulator - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR000835MarR-type HTH domainDomain
A, B, C, D, E
IPR023187Transcriptional regulator MarR-type, conserved siteConserved Site
A, B, C, D, E
IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily