8Z9D | pdb_00008z9d

cryo-EM structure of PSII-LHCII megacomplex from spinach

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
UA [auth Y]SCOP2B SuperfamilyChlorophyll a-b binding protein 8041052 3000343 SCOP2B (2022-06-29)
SC [auth YY]SCOP2B SuperfamilyChlorophyll a-b binding protein 8041052 3000343 SCOP2B (2022-06-29)
RB [auth y]SCOP2B SuperfamilyChlorophyll a-b binding protein 8041052 3000343 SCOP2B (2022-06-29)
KA [auth N]SCOP2B SuperfamilyChlorophyll a-b binding protein 8041052 3000343 SCOP2B (2022-06-29)
JB [auth n]SCOP2B SuperfamilyChlorophyll a-b binding protein 8041052 3000343 SCOP2B (2022-06-29)
IC [auth NN]SCOP2B SuperfamilyChlorophyll a-b binding protein 8041052 3000343 SCOP2B (2022-06-29)
I [auth Yy]SCOP2B SuperfamilyChlorophyll a-b binding protein 8041052 3000343 SCOP2B (2022-06-29)
HD [auth Nn]SCOP2B SuperfamilyChlorophyll a-b binding protein 8041052 3000343 SCOP2B (2022-06-29)
DA [auth G]SCOP2B SuperfamilyChlorophyll a-b binding protein 8041052 3000343 SCOP2B (2022-06-29)
CB [auth g]SCOP2B SuperfamilyChlorophyll a-b binding protein 8041052 3000343 SCOP2B (2022-06-29)
BC [auth GG]SCOP2B SuperfamilyChlorophyll a-b binding protein 8041052 3000343 SCOP2B (2022-06-29)
AD [auth Gg]SCOP2B SuperfamilyChlorophyll a-b binding protein 8041052 3000343 SCOP2B (2022-06-29)
YB [auth B]SCOP2B SuperfamilyPhotosystem II antenna protein-like 8098270 3001674 SCOP2B (2022-06-29)
XA [auth b]SCOP2B SuperfamilyPhotosystem II antenna protein-like 8098270 3001674 SCOP2B (2022-06-29)
VC [auth Bb]SCOP2B SuperfamilyPhotosystem II antenna protein-like 8098270 3001674 SCOP2B (2022-06-29)
VB [auth BB]SCOP2B SuperfamilyPhotosystem II antenna protein-like 8098270 3001674 SCOP2B (2022-06-29)
JA [auth M]SCOP2B SuperfamilyPhotosystem II reaction center protein M, PsbM 8098840 3001573 SCOP2B (2022-06-29)
IB [auth m]SCOP2B SuperfamilyPhotosystem II reaction center protein M, PsbM 8098840 3001573 SCOP2B (2022-06-29)
HC [auth MM]SCOP2B SuperfamilyPhotosystem II reaction center protein M, PsbM 8098840 3001573 SCOP2B (2022-06-29)
GD [auth Mm]SCOP2B SuperfamilyPhotosystem II reaction center protein M, PsbM 8098840 3001573 SCOP2B (2022-06-29)
IA [auth L]SCOP2B SuperfamilyPhotosystem II reaction center protein L, PsbL 8098792 3001523 SCOP2B (2022-06-29)
HB [auth l]SCOP2B SuperfamilyPhotosystem II reaction center protein L, PsbL 8098792 3001523 SCOP2B (2022-06-29)
GC [auth LL]SCOP2B SuperfamilyPhotosystem II reaction center protein L, PsbL 8098792 3001523 SCOP2B (2022-06-29)
FD [auth Ll]SCOP2B SuperfamilyPhotosystem II reaction center protein L, PsbL 8098792 3001523 SCOP2B (2022-06-29)
HA [auth K]SCOP2B SuperfamilyPhotosystem II reaction center protein K, PsbK 8098480 3001585 SCOP2B (2022-06-29)
GB [auth k]SCOP2B SuperfamilyPhotosystem II reaction center protein K, PsbK 8098480 3001585 SCOP2B (2022-06-29)
FC [auth KK]SCOP2B SuperfamilyPhotosystem II reaction center protein K, PsbK 8098480 3001585 SCOP2B (2022-06-29)
ED [auth Kk]SCOP2B SuperfamilyPhotosystem II reaction center protein K, PsbK 8098480 3001585 SCOP2B (2022-06-29)
GA [auth J]SCOP2B SuperfamilyPhotosystem II reaction center protein J, PsbJ 8100586 3001534 SCOP2B (2022-06-29)
FB [auth j]SCOP2B SuperfamilyPhotosystem II reaction center protein J, PsbJ 8100586 3001534 SCOP2B (2022-06-29)
EC [auth JJ]SCOP2B SuperfamilyPhotosystem II reaction center protein J, PsbJ 8100586 3001534 SCOP2B (2022-06-29)
DD [auth Jj]SCOP2B SuperfamilyPhotosystem II reaction center protein J, PsbJ 8100586 3001534 SCOP2B (2022-06-29)
FA [auth I]SCOP2B SuperfamilyPhotosystem II reaction center protein I, PsbI 8098836 3001590 SCOP2B (2022-06-29)
EB [auth i]SCOP2B SuperfamilyPhotosystem II reaction center protein I, PsbI 8098836 3001590 SCOP2B (2022-06-29)
DC [auth II]SCOP2B SuperfamilyPhotosystem II reaction center protein I, PsbI 8098836 3001590 SCOP2B (2022-06-29)
CD [auth Ii]SCOP2B SuperfamilyPhotosystem II reaction center protein I, PsbI 8098836 3001590 SCOP2B (2022-06-29)
EA [auth H]SCOP2B SuperfamilyPhotosystem II 10 kDa phosphoprotein PsbH 8098280 3001547 SCOP2B (2022-06-29)
DB [auth h]SCOP2B SuperfamilyPhotosystem II 10 kDa phosphoprotein PsbH 8098280 3001547 SCOP2B (2022-06-29)
CC [auth HH]SCOP2B SuperfamilyPhotosystem II 10 kDa phosphoprotein PsbH 8098280 3001547 SCOP2B (2022-06-29)
BD [auth Hh]SCOP2B SuperfamilyPhotosystem II 10 kDa phosphoprotein PsbH 8098280 3001547 SCOP2B (2022-06-29)
ZC [auth Ff]SCOP2B SuperfamilyCytochrome b559 subunits 8098786 3001602 SCOP2B (2022-06-29)
CA [auth F]SCOP2B SuperfamilyCytochrome b559 subunits 8098786 3001602 SCOP2B (2022-06-29)
BB [auth f]SCOP2B SuperfamilyCytochrome b559 subunits 8098786 3001602 SCOP2B (2022-06-29)
AC [auth FF]SCOP2B SuperfamilyCytochrome b559 subunits 8098786 3001602 SCOP2B (2022-06-29)
ZB [auth EE]SCOP2B SuperfamilyCytochrome b559 subunits 8098914 3001602 SCOP2B (2022-06-29)
YC [auth Ee]SCOP2B SuperfamilyCytochrome b559 subunits 8098914 3001602 SCOP2B (2022-06-29)
BA [auth E]SCOP2B SuperfamilyCytochrome b559 subunits 8098914 3001602 SCOP2B (2022-06-29)
AB [auth e]SCOP2B SuperfamilyCytochrome b559 subunits 8098914 3001602 SCOP2B (2022-06-29)
LA [auth O]SCOP2B SuperfamilyOMPA barrel-like 8098488 3000208 SCOP2B (2022-06-29)
KB [auth o]SCOP2B SuperfamilyOMPA barrel-like 8098488 3000208 SCOP2B (2022-06-29)
JC [auth OO]SCOP2B SuperfamilyOMPA barrel-like 8098488 3000208 SCOP2B (2022-06-29)
B [auth Oo]SCOP2B SuperfamilyOMPA barrel-like 8098488 3000208 SCOP2B (2022-06-29)
ZA [auth d]SCOP2B SuperfamilyBacterial photosystem II reaction centre, L and M subunits 8098292 3000736 SCOP2B (2022-06-29)
XC [auth Dd]SCOP2B SuperfamilyBacterial photosystem II reaction centre, L and M subunits 8098292 3000736 SCOP2B (2022-06-29)
XB [auth DD]SCOP2B SuperfamilyBacterial photosystem II reaction centre, L and M subunits 8098292 3000736 SCOP2B (2022-06-29)
AA [auth D]SCOP2B SuperfamilyBacterial photosystem II reaction centre, L and M subunits 8098292 3000736 SCOP2B (2022-06-29)
Z [auth C]SCOP2B SuperfamilyPhotosystem II antenna protein-like 8098288 3001674 SCOP2B (2022-06-29)
YA [auth c]SCOP2B SuperfamilyPhotosystem II antenna protein-like 8098288 3001674 SCOP2B (2022-06-29)
WC [auth Cc]SCOP2B SuperfamilyPhotosystem II antenna protein-like 8098288 3001674 SCOP2B (2022-06-29)
WB [auth CC]SCOP2B SuperfamilyPhotosystem II antenna protein-like 8098288 3001674 SCOP2B (2022-06-29)
T [auth 2]SCOP2B SuperfamilyChlorophyll a-b binding protein 8041052 3000343 SCOP2B (2022-06-29)
S [auth 1]SCOP2B SuperfamilyChlorophyll a-b binding protein 8041052 3000343 SCOP2B (2022-06-29)
Q [auth 22]SCOP2B SuperfamilyChlorophyll a-b binding protein 8041052 3000343 SCOP2B (2022-06-29)
P [auth 11]SCOP2B SuperfamilyChlorophyll a-b binding protein 8041052 3000343 SCOP2B (2022-06-29)
O [auth q]SCOP2B SuperfamilyPsbQ-like 8004513 3000169 SCOP2B (2022-06-29)
NA [auth Q]SCOP2B SuperfamilyPsbQ-like 8004513 3000169 SCOP2B (2022-06-29)
M [auth Qq]SCOP2B SuperfamilyPsbQ-like 8004513 3000169 SCOP2B (2022-06-29)
LC [auth QQ]SCOP2B SuperfamilyPsbQ-like 8004513 3000169 SCOP2B (2022-06-29)
N [auth p]SCOP2B SuperfamilyMog1p/PsbP-like 8078149 3000396 SCOP2B (2022-06-29)
MA [auth P]SCOP2B SuperfamilyMog1p/PsbP-like 8078149 3000396 SCOP2B (2022-06-29)
L [auth Pp]SCOP2B SuperfamilyMog1p/PsbP-like 8078149 3000396 SCOP2B (2022-06-29)
KC [auth PP]SCOP2B SuperfamilyMog1p/PsbP-like 8078149 3000396 SCOP2B (2022-06-29)
VA [auth Z]SCOP2B SuperfamilyPsbZ-like 8100588 3001624 SCOP2B (2022-06-29)
TC [auth ZZ]SCOP2B SuperfamilyPsbZ-like 8100588 3001624 SCOP2B (2022-06-29)
SB [auth z]SCOP2B SuperfamilyPsbZ-like 8100588 3001624 SCOP2B (2022-06-29)
J [auth Zz]SCOP2B SuperfamilyPsbZ-like 8100588 3001624 SCOP2B (2022-06-29)
WA [auth a]SCOP2B SuperfamilyBacterial photosystem II reaction centre, L and M subunits 8098918 3000736 SCOP2B (2022-06-29)
UC [auth Aa]SCOP2B SuperfamilyBacterial photosystem II reaction centre, L and M subunits 8098918 3000736 SCOP2B (2022-06-29)
UB [auth AA]SCOP2B SuperfamilyBacterial photosystem II reaction centre, L and M subunits 8098918 3000736 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyBacterial photosystem II reaction centre, L and M subunits 8098918 3000736 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
H [auth Xx],
QB [auth x],
RC [auth XX],
TA [auth X]		PF06596Photosystem II reaction centre X protein (PsbX) (PsbX)Photosystem II reaction centre X protein (PsbX)- Family
E [auth Tt],
NB [auth t],
OC [auth TT],
QA [auth T]		PF01405Photosystem II reaction centre T protein (PsbT)Photosystem II reaction centre T protein- Family
D [auth Ss],
MB [auth s],
NC [auth SS],
PA [auth S]		PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
C [auth Rr],
LB [auth r],
MC [auth RR],
OA [auth R]		PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
GD [auth Mm],
HC [auth MM],
IB [auth m],
JA [auth M]		PF05151Photosystem II reaction centre M protein (PsbM) (PsbM)Photosystem II reaction centre M protein (PsbM)- Family
CD [auth Ii],
DC [auth II],
EB [auth i],
FA [auth I]		PF02532Photosystem II reaction centre I protein (PSII 4.8 kDa protein) (PsbI)Photosystem II reaction centre I protein (PSII 4.8 kDa protein)- Family
BD [auth Hh],
CC [auth HH],
DB [auth h],
EA [auth H]		PF00737Photosystem II 10 kDa phosphoprotein (PsbH)Photosystem II 10 kDa phosphoprotein- Family
AB [auth e],
BA [auth E],
YC [auth Ee],
ZB [auth EE]		PF00283Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits (Cytochrom_B559)Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits- Family
AB [auth e],
BA [auth E],
YC [auth Ee],
ZB [auth EE]		PF00284Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit (Cytochrom_B559a)Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit- Family
B [auth Oo],
JC [auth OO],
KB [auth o],
LA [auth O]		PF01716Manganese-stabilising protein / photosystem II polypeptide (MSP)Manganese-stabilising protein / photosystem II polypeptide- Family
AA [auth D],
XB [auth DD],
XC [auth Dd],
ZA [auth d]		PF00124Photosynthetic reaction centre protein (Photo_RC)Photosynthetic reaction centre protein- Family
WB [auth CC],
WC [auth Cc],
YA [auth c],
Z [auth C]		PF00421Photosystem II protein (PSII)Photosystem II protein- Family
W [auth 5],
Y [auth 55]		PF06298Photosystem II protein Y (PsbY) (PsbY)Photosystem II protein Y (PsbY)- Family
V [auth 0],
X [auth 00]		PF04725Photosystem II 10 kDa polypeptide PsbR (PsbR)Photosystem II 10 kDa polypeptide PsbR- Family
R [auth 33],
U [auth 3]		PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
P [auth 11],
Q [auth 22],
S [auth 1],
T [auth 2]		PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
KC [auth PP],
L [auth Pp],
MA [auth P],
N [auth p]		PF01789PsbP (PsbP)PsbPThis entry consists of the 23 kDa subunit of oxygen evolving system of photosystem II or PsbP from various plants (where it is encoded by the nuclear genome) and Cyanobacteria (known as CyanoP). The 23 KDa PsbP protein is required for PSII to be ful ...This entry consists of the 23 kDa subunit of oxygen evolving system of photosystem II or PsbP from various plants (where it is encoded by the nuclear genome) and Cyanobacteria (known as CyanoP). The 23 KDa PsbP protein is required for PSII to be fully operational in vivo, it increases the affinity of the water oxidation site for Cl- and provides the conditions required for high affinity binding of Ca2+ [2]. Structure of CyanoP from Synechocystis sp. revealed that it has an alpha-beta-alpha fold containing 10 beta strands organized into two anti-parallel beta-sheets, packed against alpha-helices. This entry covers the first seven beta-stands (beta1-beta7) and the N-terminal alpha-helix [1].
Domain
J [auth Zz],
SB [auth z],
TC [auth ZZ],
VA [auth Z]		PF01737YCF9 (Ycf9)YCF9- Family
A,
UB [auth AA],
UC [auth Aa],
WA [auth a]		PF00124Photosynthetic reaction centre protein (Photo_RC)Photosynthetic reaction centre protein- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Chlorophyll a-b binding protein, chloroplastic
H [auth Xx],
QB [auth x],
RC [auth XX],
TA [auth X]		Photosystem II reaction center X protein, chloroplastic-
G [auth Ww],
PB [auth w],
QC [auth WW],
SA [auth W]		Photosystem II reaction center W protein, chloroplastic-
F [auth Uu],
OB [auth u],
PC [auth UU],
RA [auth U]		Photosystem II 5 kDa protein, chloroplastic- - -
E [auth Tt],
NB [auth t],
OC [auth TT],
QA [auth T]		Photosystem II reaction center protein T-
D [auth Ss],
MB [auth s],
NC [auth SS],
PA [auth S]		Chlorophyll a-b binding protein, chloroplastic
C [auth Rr],
LB [auth r],
MC [auth RR],
OA [auth R]		Chlorophyll a-b binding protein, chloroplastic
VB [auth BB],
VC [auth Bb],
XA [auth b],
YB [auth B]		Photosystem II CP47 reaction center protein
GD [auth Mm],
HC [auth MM],
IB [auth m],
JA [auth M]		Photosystem II reaction center protein M-
FD [auth Ll],
GC [auth LL],
HB [auth l],
IA [auth L]		Photosystem II reaction center protein L-
ED [auth Kk],
FC [auth KK],
GB [auth k],
HA [auth K]		Photosystem II reaction center protein K-
DD [auth Jj],
EC [auth JJ],
FB [auth j],
GA [auth J]		Photosystem II reaction center protein J-
CD [auth Ii],
DC [auth II],
EB [auth i],
FA [auth I]		Photosystem II reaction center protein I-
BD [auth Hh],
CC [auth HH],
DB [auth h],
EA [auth H]		Photosystem II reaction center protein H
AC [auth FF],
BB [auth f],
CA [auth F],
ZC [auth Ff]		Cytochrome b559 subunit beta
AB [auth e],
BA [auth E],
YC [auth Ee],
ZB [auth EE]		Cytochrome b559 subunit alpha
B [auth Oo],
JC [auth OO],
KB [auth o],
LA [auth O]		Oxygen-evolving enhancer protein 1, chloroplastic
AA [auth D],
XB [auth DD],
XC [auth Dd],
ZA [auth d]		Photosystem II D2 protein
WB [auth CC],
WC [auth Cc],
YA [auth c],
Z [auth C]		Photosystem II CP43 reaction center protein
W [auth 5],
Y [auth 55]		Photosystem II reaction center proteins PsbY, chloroplastic
V [auth 0],
X [auth 00]		Photosystem II 10 kDa polypeptide, chloroplastic-
R [auth 33],
U [auth 3]		Chlorophyll a-b binding protein, chloroplastic
P [auth 11],
Q [auth 22],
S [auth 1],
T [auth 2]		Chlorophyll a-b binding protein, chloroplastic
LC [auth QQ],
M [auth Qq],
NA [auth Q],
O [auth q]		Oxygen-evolving enhancer protein 3, chloroplastic
KC [auth PP],
L [auth Pp],
MA [auth P],
N [auth p]		Oxygen-evolving enhancer protein 2, chloroplastic
K [auth 44],
TB [auth 4]		Chlorophyll a-b binding protein CP24, chloroplastic
J [auth Zz],
SB [auth z],
TC [auth ZZ],
VA [auth Z]		Photosystem II reaction center protein Z-
A,
UB [auth AA],
UC [auth Aa],
WA [auth a]		Photosystem II protein D1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
IPR022796Chlorophyll A-B binding proteinFamily
H [auth Xx],
QB [auth x],
RC [auth XX],
TA [auth X]		IPR009518Photosystem II PsbXFamily
G [auth Ww],
PB [auth w],
QC [auth WW],
SA [auth W]		IPR009806Photosystem II PsbW, class 2Family
F [auth Uu],
OB [auth u],
PC [auth UU],
RA [auth U]		IPR040296Photosystem II 5kDa protein, chloroplasticFamily
E [auth Tt],
NB [auth t],
OC [auth TT],
QA [auth T]		IPR001743Photosystem II PsbTFamily
E [auth Tt],
NB [auth t],
OC [auth TT],
QA [auth T]		IPR037268Photosystem II PsbT superfamilyHomologous Superfamily
D [auth Ss],
MB [auth s],
NC [auth SS],
PA [auth S]		IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
D [auth Ss],
MB [auth s],
NC [auth SS],
PA [auth S]		IPR022796Chlorophyll A-B binding proteinFamily
C [auth Rr],
LB [auth r],
MC [auth RR],
OA [auth R]		IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
C [auth Rr],
LB [auth r],
MC [auth RR],
OA [auth R]		IPR022796Chlorophyll A-B binding proteinFamily
VB [auth BB],
VC [auth Bb],
XA [auth b],
YB [auth B]		IPR036001Photosystem antenna protein-like superfamilyHomologous Superfamily
VB [auth BB],
VC [auth Bb],
XA [auth b],
YB [auth B]		IPR000932Photosystem antenna protein-likeFamily
VB [auth BB],
VC [auth Bb],
XA [auth b],
YB [auth B]		IPR017486Photosystem II CP47 reaction centre proteinFamily
GD [auth Mm],
HC [auth MM],
IB [auth m],
JA [auth M]		IPR007826Photosystem II PsbMFamily
GD [auth Mm],
HC [auth MM],
IB [auth m],
JA [auth M]		IPR037269Photosystem II PsbM superfamilyHomologous Superfamily
FD [auth Ll],
GC [auth LL],
HB [auth l],
IA [auth L]		IPR003372Photosystem II PsbLFamily
FD [auth Ll],
GC [auth LL],
HB [auth l],
IA [auth L]		IPR037266Photosystem II PsbL superfamilyHomologous Superfamily
ED [auth Kk],
FC [auth KK],
GB [auth k],
HA [auth K]		IPR037270Photosystem II PsbK superfamilyHomologous Superfamily
ED [auth Kk],
FC [auth KK],
GB [auth k],
HA [auth K]		IPR003687Photosystem II PsbKFamily
DD [auth Jj],
EC [auth JJ],
FB [auth j],
GA [auth J]		IPR002682Photosystem II PsbJFamily
DD [auth Jj],
EC [auth JJ],
FB [auth j],
GA [auth J]		IPR037267Photosystem II PsbJ superfamilyHomologous Superfamily
CD [auth Ii],
DC [auth II],
EB [auth i],
FA [auth I]		IPR037271Photosystem II PsbI superfamilyHomologous Superfamily
CD [auth Ii],
DC [auth II],
EB [auth i],
FA [auth I]		IPR003686Photosystem II PsbIFamily
BD [auth Hh],
CC [auth HH],
DB [auth h],
EA [auth H]		IPR036863Photosystem II reaction centre protein H superfamilyHomologous Superfamily
BD [auth Hh],
CC [auth HH],
DB [auth h],
EA [auth H]		IPR001056Photosystem II reaction centre protein HFamily
AC [auth FF],
BB [auth f],
CA [auth F],
ZC [auth Ff]		IPR006241Photosystem II cytochrome b559, beta subunitFamily
AC [auth FF],
BB [auth f],
CA [auth F],
ZC [auth Ff]		IPR013081Photosystem II cytochrome b559, N-terminalDomain
AC [auth FF],
BB [auth f],
CA [auth F],
ZC [auth Ff]		IPR006216Photosystem II cytochrome b559, conserved siteConserved Site
AB [auth e],
BA [auth E],
YC [auth Ee],
ZB [auth EE]		IPR013081Photosystem II cytochrome b559, N-terminalDomain
AB [auth e],
BA [auth E],
YC [auth Ee],
ZB [auth EE]		IPR006217Photosystem II cytochrome b559, alpha subunitFamily
AB [auth e],
BA [auth E],
YC [auth Ee],
ZB [auth EE]		IPR013082Photosystem II cytochrome b559, alpha subunit, lumenal regionDomain
AB [auth e],
BA [auth E],
YC [auth Ee],
ZB [auth EE]		IPR037025Photosystem II cytochrome b559, alpha subunit superfamilyHomologous Superfamily
AB [auth e],
BA [auth E],
YC [auth Ee],
ZB [auth EE]		IPR006216Photosystem II cytochrome b559, conserved siteConserved Site
B [auth Oo],
JC [auth OO],
KB [auth o],
LA [auth O]		IPR011250Outer membrane protein/outer membrane enzyme PagP, beta-barrelHomologous Superfamily
B [auth Oo],
JC [auth OO],
KB [auth o],
LA [auth O]		IPR002628Photosystem II extrinsic protein OFamily
AA [auth D],
XB [auth DD],
XC [auth Dd],
ZA [auth d]		IPR005868Photosystem II D2Family
AA [auth D],
XB [auth DD],
XC [auth Dd],
ZA [auth d]		IPR036854Photosystem II protein D1/D2 superfamilyHomologous Superfamily
AA [auth D],
XB [auth DD],
XC [auth Dd],
ZA [auth d]		IPR000484Photosynthetic reaction centre, L/MFamily
AA [auth D],
XB [auth DD],
XC [auth Dd],
ZA [auth d]		IPR055265Photosynthetic reaction centre, L/M, conserved siteConserved Site
AA [auth D],
XB [auth DD],
XC [auth Dd],
ZA [auth d]		IPR055266Photosystem II protein D1/D2Family
WB [auth CC],
WC [auth Cc],
YA [auth c],
Z [auth C]		IPR036001Photosystem antenna protein-like superfamilyHomologous Superfamily
WB [auth CC],
WC [auth Cc],
YA [auth c],
Z [auth C]		IPR000932Photosystem antenna protein-likeFamily
WB [auth CC],
WC [auth Cc],
YA [auth c],
Z [auth C]		IPR005869Photosystem II CP43 reaction centre proteinFamily
WB [auth CC],
WC [auth Cc],
YA [auth c],
Z [auth C]		IPR044900Photosystem II CP43 reaction centre protein superfamilyHomologous Superfamily
W [auth 5],
Y [auth 55]		IPR038760Photosystem II PsbY, plantFamily
W [auth 5],
Y [auth 55]		IPR009388Photosystem II PsbYFamily
V [auth 0],
X [auth 00]		IPR006814Photosystem II PsbRFamily
R [auth 33],
U [auth 3]		IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
R [auth 33],
U [auth 3]		IPR022796Chlorophyll A-B binding proteinFamily
P [auth 11],
Q [auth 22],
S [auth 1],
T [auth 2]		IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
P [auth 11],
Q [auth 22],
S [auth 1],
T [auth 2]		IPR022796Chlorophyll A-B binding proteinFamily
LC [auth QQ],
M [auth Qq],
NA [auth Q],
O [auth q]		IPR008797Oxygen-evolving enhancer protein 3Family
LC [auth QQ],
M [auth Qq],
NA [auth Q],
O [auth q]		IPR054099Oxygen-evolving enhancer protein 3, plantsFamily
LC [auth QQ],
M [auth Qq],
NA [auth Q],
O [auth q]		IPR023222PsbQ-like domain superfamilyHomologous Superfamily
KC [auth PP],
L [auth Pp],
MA [auth P],
N [auth p]		IPR002683PsbP, C-terminalDomain
KC [auth PP],
L [auth Pp],
MA [auth P],
N [auth p]		IPR016123Mog1/PsbP, alpha/beta/alpha sandwichHomologous Superfamily
K [auth 44],
TB [auth 4]		IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
K [auth 44],
TB [auth 4]		IPR022796Chlorophyll A-B binding proteinFamily
J [auth Zz],
SB [auth z],
TC [auth ZZ],
VA [auth Z]		IPR036512Photosystem II PsbZ superfamilyHomologous Superfamily
J [auth Zz],
SB [auth z],
TC [auth ZZ],
VA [auth Z]		IPR002644Photosystem II PsbZ, reaction centreFamily
A,
UB [auth AA],
UC [auth Aa],
WA [auth a]		IPR036854Photosystem II protein D1/D2 superfamilyHomologous Superfamily
A,
UB [auth AA],
UC [auth Aa],
WA [auth a]		IPR005867Photosystem II protein D1Family
A,
UB [auth AA],
UC [auth Aa],
WA [auth a]		IPR000484Photosynthetic reaction centre, L/MFamily
A,
UB [auth AA],
UC [auth Aa],
WA [auth a]		IPR055265Photosynthetic reaction centre, L/M, conserved siteConserved Site
A,
UB [auth AA],
UC [auth Aa],
WA [auth a]		IPR055266Photosystem II protein D1/D2Family

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

ChainsResource LinkGroupSubgroupProtein
mpstrucTRANSMEMBRANE PROTEINS: ALPHA-HELICALPhotosystem+Light-Harvesting Complex SupercomplexPhotosystem II in complex with Light-Harvesting Complex II (LHC-II)