Photosynthetic LH1-RC-HiPIP complex from the purple bacterium Halorhodospira halophila
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C [auth M] | C1-set | e8z82M01 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: C1-set | ECOD (v294.2) |
| KA [auth a] | C1-set | e8z82a01 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: C1-set | ECOD (v294.2) |
| X | WD40 | e8z82X1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| T | WD40 | e8z82T1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| P | WD40 | e8z82P1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| L [auth J] | WD40 | e8z82J1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| JA [auth 0] | WD40 | e8z8201 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| H [auth E] | WD40 | e8z82E1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| FA [auth 6] | WD40 | e8z8261 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| BA [auth 2] | WD40 | e8z8221 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| W | WD40 | e8z82W1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| S | WD40 | e8z82S1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| O | WD40 | e8z82O1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| K [auth I] | WD40 | e8z82I1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| IA [auth 9] | WD40 | e8z8291 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| G [auth D] | WD40 | e8z82D1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| EA [auth 5] | WD40 | e8z8251 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| AA [auth 1] | WD40 | e8z8211 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| Z | WD40 | e8z82Z1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| V | WD40 | e8z82V1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| R | WD40 | e8z82R1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| N | WD40 | e8z82N1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| J [auth G] | WD40 | e8z82G1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| HA [auth 8] | WD40 | e8z8281 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| F [auth B] | WD40 | e8z82B1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| DA [auth 4] | WD40 | e8z8241 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| Y | WD40 | e8z82Y1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| U | WD40 | e8z82U1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| Q | WD40 | e8z82Q1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| M [auth K] | WD40 | e8z82K1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| I [auth F] | WD40 | e8z82F1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| GA [auth 7] | WD40 | e8z8271 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| E [auth A] | WD40 | e8z82A1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| CA [auth 3] | WD40 | e8z8231 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| D [auth H] | C1-set | e8z82H01 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: C1-set | ECOD (v294.2) |
| B [auth L] | C1-set | e8z82L01 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: C1-set | ECOD (v294.2) |
| A [auth C] | C1-set | e8z82C01 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: C1-set | ECOD (v294.2) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| C [auth M] | PF00124 | Photosynthetic reaction centre protein (Photo_RC) | Photosynthetic reaction centre protein | - | Family |
| PF00556 | Antenna complex alpha/beta subunit (LHC) | Antenna complex alpha/beta subunit | Domain | ||
| PF00556 | Antenna complex alpha/beta subunit (LHC) | Antenna complex alpha/beta subunit | Domain | ||
| PF00556 | Antenna complex alpha/beta subunit (LHC) | Antenna complex alpha/beta subunit | Domain | ||
| PF00556 | Antenna complex alpha/beta subunit (LHC) | Antenna complex alpha/beta subunit | Domain | ||
| PF01355 | High potential iron-sulfur protein (HIPIP) | High potential iron-sulfur protein | Domain | ||
| D [auth H] | PF03967 | Photosynthetic reaction centre, H-chain N-terminal region (PRCH) | Photosynthetic reaction centre, H-chain N-terminal region | - | Family |
| D [auth H] | PF05239 | PRC-barrel domain (PRC) | PRC-barrel domain | The PRC-barrel is an all beta barrel domain found in photosystem reaction centre subunit H of the purple bacteria and RNA metabolism proteins of the RimM group. PRC-barrels are approximately 80 residues long, and found widely represented in bacteria, ... | Domain |
| B [auth L] | PF00124 | Photosynthetic reaction centre protein (Photo_RC) | Photosynthetic reaction centre protein | - | Family |
| A [auth C] | PF02276 | Photosynthetic reaction centre cytochrome C subunit (CytoC_RC) | Photosynthetic reaction centre cytochrome C subunit | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
| Chains | External Link | Comment |
|---|---|---|
| PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
| Chains | External Link | Comment |
|---|---|---|
| MemProtMD | Annotated as membrane protein by MemProtMD |














