Crystal structure of trehalose synthase mutant N253C from Deinococcus radiodurans


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
HFe_hyd_SSUe8ywdH1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Fe_hyd_SSUECOD (v295.2)
GFe_hyd_SSUe8ywdG1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Fe_hyd_SSUECOD (v295.2)
FFe_hyd_SSUe8ywdF1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Fe_hyd_SSUECOD (v295.2)
EFe_hyd_SSUe8ywdE1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Fe_hyd_SSUECOD (v295.2)
DFe_hyd_SSUe8ywdD1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Fe_hyd_SSUECOD (v295.2)
CFe_hyd_SSUe8ywdC1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Fe_hyd_SSUECOD (v295.2)
BFe_hyd_SSUe8ywdB1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Fe_hyd_SSUECOD (v295.2)
ALip_Ce8ywdA01 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Lip_CECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF00128Alpha amylase, catalytic domain (Alpha-amylase)Alpha amylase, catalytic domainAlpha amylase is classified as family 13 of the glycosyl hydrolases. The structure is an 8 stranded alpha/beta barrel containing the active site, interrupted by a ~70 a.a. calcium-binding domain protruding between beta strand 3 and alpha helix 3, a ...Alpha amylase is classified as family 13 of the glycosyl hydrolases. The structure is an 8 stranded alpha/beta barrel containing the active site, interrupted by a ~70 a.a. calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain.
Domain
A, B, C, D, E
PF16657Maltogenic Amylase, C-terminal domain (Malt_amylase_C)Maltogenic Amylase, C-terminal domain- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR045857Oligo-1,6-glucosidase, domain 2Homologous Superfamily
A, B, C, D, E
IPR032091Maltogenic amylase-like, C-terminalDomain
A, B, C, D, E
IPR006047Glycosyl hydrolase family 13, catalytic domainDomain
A, B, C, D, E
IPR017853Glycoside hydrolase superfamilyHomologous Superfamily
A, B, C, D, E
IPR012810Trehalose synthase/alpha-amylase, N-terminalDomain
A, B, C, D, E
IPR013780Glycosyl hydrolase, all-betaHomologous Superfamily