8YR6 | pdb_00008yr6

Crystal structure of E. coli phosphatidylserine synthase complexed with 16:0/16:0 CDP-DG

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	DncV-like_NTFase	e8yr6A01	A: a/b three-layered sandwiches	X: ATP-grasp_6	H: ATP-grasp_6	T: ATP-grasp_6	F: DncV-like_NTFase	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF00614	Phospholipase D Active site motif (PLDc)	Phospholipase D Active site motif	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	CDP-diacylglycerol--serine O-phosphatidyltransferase	CDP-alcohol phosphatidyltransferase activity CDP-diacylglycerol-serine O-phosphatidyltransferase activity transferase activity catalytic activity phosphotransferase activity, for other substituted phosphate groups transferase activity, transferring phosphorus-containing groups binding phospholipid binding lipid binding CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity	phosphatidylglycerol metabolic process glycerophospholipid biosynthetic process glycerophospholipid metabolic process lipid biosynthetic process primary metabolic process cardiolipin metabolic process phospholipid biosynthetic process phospholipid metabolic process biosynthetic process glycerolipid biosynthetic process organophosphate metabolic process phosphatidylglycerol biosynthetic process organophosphate biosynthetic process phosphate-containing compound metabolic process cardiolipin biosynthetic process phosphatidylglycerol metabolic process glycerophospholipid biosynthetic process glycerophospholipid metabolic process lipid biosynthetic process primary metabolic process cardiolipin metabolic process phospholipid biosynthetic process phospholipid metabolic process biosynthetic process glycerolipid biosynthetic process organophosphate metabolic process phosphatidylglycerol biosynthetic process organophosphate biosynthetic process phosphate-containing compound metabolic process cardiolipin biosynthetic process glycerolipid metabolic process metabolic process cellular process phosphorus metabolic process lipid metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol cell periphery plasma membrane membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR016270	CDP-alcohol phosphatidyltransferase class-II family	Family
A	IPR025202	Cardiolipin synthase-like, phospholipase D-like domain	Domain
A	IPR001736	Phospholipase D/Transphosphatidylase	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.