Annotations: 8YAA

Cryo-EM structure of MIK2-SCOOP12-BAK1

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B [auth A]	LRR_1, LRR_5, LRR_6, LRR_8	e8yaaA01	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: LRR_1, LRR_5, LRR_6, LRR_8	ECOD (v295)
A [auth C]	LRR_1, LRR_5, LRR_6, LRR_8	e8yaaC01	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: LRR_1, LRR_5, LRR_6, LRR_8	ECOD (v295)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
B [auth A]	PF13855	Leucine rich repeat (LRR_8)	Leucine rich repeat	-	Repeat
B [auth A]	PF08263	Leucine rich repeat N-terminal domain (LRRNT_2)	Leucine rich repeat N-terminal domain	-	Family
B [auth A]	PF00560	Leucine Rich Repeat (LRR_1)	Leucine Rich Repeat	-	Repeat
A [auth C]	PF13855	Leucine rich repeat (LRR_8)	Leucine rich repeat	-	Repeat
A [auth C]	PF08263	Leucine rich repeat N-terminal domain (LRRNT_2)	Leucine rich repeat N-terminal domain	-	Family
A [auth C]	PF00560	Leucine Rich Repeat (LRR_1)	Leucine Rich Repeat	-	Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
C [auth B]	Serine rich endogenous peptide 12	LRR domain binding protein binding binding protein domain specific binding receptor serine/threonine kinase binding signaling receptor binding	biological process involved in interspecies interaction between organisms response to stimulus response to other organism response to insect response to external stimulus response to external biotic stimulus response to biotic stimulus plant-type cell wall organization cellular component organization plant-type cell wall organization or biogenesis cell wall organization or biogenesis cell wall organization cellular process cellular component organization or biogenesis biological process involved in interspecies interaction between organisms response to stimulus response to other organism response to insect response to external stimulus response to external biotic stimulus response to biotic stimulus plant-type cell wall organization cellular component organization plant-type cell wall organization or biogenesis cell wall organization or biogenesis cell wall organization cellular process cellular component organization or biogenesis external encapsulating structure organization carbohydrate derivative biosynthetic process glycosyl compound biosynthetic process indole glucosinolate metabolic process oxoacid metabolic process glucosinolate metabolic process carbohydrate derivative metabolic process indole-containing compound metabolic process indole glucosinolate biosynthetic process sulfur compound biosynthetic process biosynthetic process indole-containing compound biosynthetic process glucosinolate biosynthetic process S-glycoside biosynthetic process sulfur compound metabolic process metabolic process small molecule metabolic process developmental process regulation of biological process cellular developmental process signaling biological regulation cell-cell signaling cell communication cell-cell signaling involved in cell fate commitment cell differentiation cell fate commitment regulation of cellular process negative regulation of metabolic process reactive oxygen species metabolic process negative regulation of biological process negative regulation of reactive oxygen species metabolic process negative regulation of cellular process regulation of metabolic process regulation of reactive oxygen species metabolic process defense response to insect defense response response to stress response to wounding response to bacterium fatty acid metabolic process long-chain fatty acid metabolic process monocarboxylic acid biosynthetic process small molecule biosynthetic process jasmonic acid biosynthetic process long-chain fatty acid biosynthetic process carboxylic acid metabolic process lipid biosynthetic process primary metabolic process jasmonic acid metabolic process fatty acid biosynthetic process carboxylic acid biosynthetic process monocarboxylic acid metabolic process lipid metabolic process regulation of defense response to bacterium regulation of defense response regulation of response to biotic stimulus regulation of response to external stimulus defense response to bacterium regulation of response to stimulus regulation of response to stress regulation of growth regulation of cellular component organization regulation of developmental process developmental growth unidimensional cell growth cell morphogenesis cell growth regulation of cell morphogenesis anatomical structure development regulation of anatomical structure morphogenesis regulation of developmental growth growth regulation of cell growth developmental growth involved in morphogenesis regulation of unidimensional cell growth anatomical structure morphogenesis multicellular organismal process multicellular organism development root meristem growth meristem maintenance meristem growth root development system development plant organ development root morphogenesis plant gross anatomical part developmental process regulation of root meristem growth regulation of meristem growth plant organ morphogenesis meristem development root system development response to herbivore defense response to fungus regulation of defense response to fungus response to fungus regulation of root development reactive oxygen species biosynthetic process	cell periphery cellular anatomical structure plasma membrane membrane extracellular region apoplast
B [auth A]	MDIS1-interacting receptor like kinase 2	molecular transducer activity signaling receptor activity catalytic activity, acting on a protein kinase activity protein kinase activity transferase activity catalytic activity protein serine kinase activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding molecular transducer activity signaling receptor activity catalytic activity, acting on a protein kinase activity protein kinase activity transferase activity catalytic activity protein serine kinase activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding protein serine/threonine kinase activity peptide receptor activity peptide binding	fatty acid metabolic process long-chain fatty acid metabolic process monocarboxylic acid biosynthetic process oxoacid metabolic process small molecule biosynthetic process jasmonic acid biosynthetic process long-chain fatty acid biosynthetic process carboxylic acid metabolic process lipid biosynthetic process primary metabolic process jasmonic acid metabolic process fatty acid biosynthetic process carboxylic acid biosynthetic process biosynthetic process fatty acid metabolic process long-chain fatty acid metabolic process monocarboxylic acid biosynthetic process oxoacid metabolic process small molecule biosynthetic process jasmonic acid biosynthetic process long-chain fatty acid biosynthetic process carboxylic acid metabolic process lipid biosynthetic process primary metabolic process jasmonic acid metabolic process fatty acid biosynthetic process carboxylic acid biosynthetic process biosynthetic process metabolic process cellular process small molecule metabolic process monocarboxylic acid metabolic process lipid metabolic process cellular response to stimulus regulation of biological process regulation of cellular process response to stimulus signaling response to endogenous stimulus biological regulation hormone-mediated signaling pathway cell communication cellular response to endogenous stimulus cellular response to chemical stimulus response to hormone response to chemical signal transduction cellular response to hormone stimulus biological process involved in interspecies interaction between organisms response to other organism response to external stimulus response to external biotic stimulus response to biotic stimulus response to herbivore response to peptide cellular response to peptide carbohydrate derivative biosynthetic process glycosyl compound biosynthetic process indole glucosinolate metabolic process glucosinolate metabolic process carbohydrate derivative metabolic process indole-containing compound metabolic process indole glucosinolate biosynthetic process sulfur compound biosynthetic process indole-containing compound biosynthetic process glucosinolate biosynthetic process S-glycoside biosynthetic process sulfur compound metabolic process defense response to insect defense response response to stress regulation of defense response positive regulation of biological process positive regulation of response to stimulus regulation of response to stimulus regulation of response to stress positive regulation of defense response positive chemotaxis developmental process chemotaxis multi-multicellular organism process multicellular organismal process pollination reproductive process pollen tube guidance developmental process involved in reproduction taxis anatomical structure development pollen tube development locomotion response to bacterium response to molecule of bacterial origin	cell projection pollen tube cellular anatomical structure plasma membrane bounded cell projection cell periphery plasma membrane membrane cell-cell junction symplast anchoring junction cell junction plasmodesma
A [auth C]	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1	protein binding binding signaling receptor binding protein heterodimerization activity protein dimerization activity molecular transducer activity catalytic activity, acting on a protein kinase activity protein kinase activity signaling receptor activity transferase activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups protein tyrosine kinase activity protein binding binding signaling receptor binding protein heterodimerization activity protein dimerization activity molecular transducer activity catalytic activity, acting on a protein kinase activity protein kinase activity signaling receptor activity transferase activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups protein tyrosine kinase activity transmembrane receptor protein tyrosine kinase activity transmembrane receptor protein kinase activity transmembrane signaling receptor activity catalytic activity protein serine kinase activity adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding protein serine/threonine kinase activity receptor serine/threonine kinase binding transmembrane receptor protein serine/threonine kinase activity identical protein binding	biological process involved in interspecies interaction between organisms response to oomycetes response to stimulus response to other organism defense response response to stress response to external stimulus response to external biotic stimulus response to biotic stimulus defense response to oomycetes cellular response to stimulus regulation of cellular process response to lipid signaling biological process involved in interspecies interaction between organisms response to oomycetes response to stimulus response to other organism defense response response to stress response to external stimulus response to external biotic stimulus response to biotic stimulus defense response to oomycetes cellular response to stimulus regulation of cellular process response to lipid signaling hormone-mediated signaling pathway cell communication brassinosteroid mediated signaling pathway cellular response to endogenous stimulus response to hormone response to steroid hormone signal transduction cellular response to steroid hormone stimulus cellular response to hormone stimulus steroid hormone receptor signaling pathway regulation of biological process cell surface receptor signaling pathway response to endogenous stimulus cellular response to brassinosteroid stimulus biological regulation response to oxygen-containing compound cellular response to oxygen-containing compound cellular response to chemical stimulus response to chemical response to brassinosteroid cellular response to lipid cellular process immune response defense response to symbiont cell death symbiont-induced defense-related programmed cell death cellular response to stress defense response to other organism immune system process plant-type hypersensitive response innate immune response programmed cell death defense response to bacterium response to bacterium defense response to fungus response to fungus	cell periphery cellular anatomical structure plasma membrane membrane protein-containing complex membrane-bounded organelle intracellular anatomical structure endosome intracellular vesicle intracellular membrane-bounded organelle endomembrane system intracellular organelle cytoplasmic vesicle organelle cell periphery cellular anatomical structure plasma membrane membrane protein-containing complex membrane-bounded organelle intracellular anatomical structure endosome intracellular vesicle intracellular membrane-bounded organelle endomembrane system intracellular organelle cytoplasmic vesicle organelle cytoplasm vesicle endosome membrane cytoplasmic vesicle membrane bounding membrane of organelle vesicle membrane organelle membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B [auth A]	IPR017441	Protein kinase, ATP binding site	Binding Site
B [auth A]	IPR051420	Ser/Thr Protein Kinases with Diverse Regulatory Roles	Family
B [auth A]	IPR008266	Tyrosine-protein kinase, active site	Active Site
B [auth A]	IPR013210	Leucine-rich repeat-containing N-terminal, plant-type	Domain
B [auth A]	IPR003591	Leucine-rich repeat, typical subtype	Repeat
B [auth A]	IPR000719	Protein kinase domain	Domain
B [auth A]	IPR001611	Leucine-rich repeat	Repeat
B [auth A]	IPR011009	Protein kinase-like domain superfamily	Homologous Superfamily
B [auth A]	IPR055414	Disease resistance R13L4/SHOC-2-like, LRR domain	Domain
B [auth A]	IPR032675	Leucine-rich repeat domain superfamily	Homologous Superfamily
A [auth C]	IPR017441	Protein kinase, ATP binding site	Binding Site
A [auth C]	IPR013210	Leucine-rich repeat-containing N-terminal, plant-type	Domain
A [auth C]	IPR000719	Protein kinase domain	Domain
A [auth C]	IPR001245	Serine-threonine/tyrosine-protein kinase, catalytic domain	Domain
A [auth C]	IPR001611	Leucine-rich repeat	Repeat
A [auth C]	IPR011009	Protein kinase-like domain superfamily	Homologous Superfamily
A [auth C]	IPR032675	Leucine-rich repeat domain superfamily	Homologous Superfamily
A [auth C]	IPR008271	Serine/threonine-protein kinase, active site	Active Site

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

8YAA | pdb_00008yaa

Cryo-EM structure of MIK2-SCOOP12-BAK1

External Resource: Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Protein Family Annotation Pfam Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage