8XZ6 | pdb_00008xz6

MERS-CoV S and radixin complex structure

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF09379	FERM N-terminal domain (FERM_N)	FERM N-terminal domain	This domain is the N-terminal ubiquitin-like structural domain of the FERM domain.	Domain
A, B, C, D	PF09380	FERM C-terminal PH-like domain (FERM_C)	FERM C-terminal PH-like domain		Domain
A, B, C, D	PF00373	FERM central domain (FERM_M)	FERM central domain	This domain is the central structural domain of the FERM domain.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
E, F, G, H	Spike protein S2'	-	viral process fusion of virus membrane with host endosome membrane membrane fusion involved in viral entry into host cell virion attachment to host cell biological process involved in interspecies interaction between organisms receptor-mediated virion attachment to host cell adhesion of symbiont to host cell viral life cycle adhesion of symbiont to host biological process involved in interaction with host biological process involved in symbiotic interaction membrane organization cellular component organization membrane fusion viral process fusion of virus membrane with host endosome membrane membrane fusion involved in viral entry into host cell virion attachment to host cell biological process involved in interspecies interaction between organisms receptor-mediated virion attachment to host cell adhesion of symbiont to host cell viral life cycle adhesion of symbiont to host biological process involved in interaction with host biological process involved in symbiotic interaction membrane organization cellular component organization membrane fusion cellular process cellular component organization or biogenesis fusion of virus membrane with host plasma membrane symbiont entry into host cell symbiont entry into host endocytosis involved in viral entry into host cell regulation of biological process positive regulation of viral life cycle positive regulation of viral process biological regulation positive regulation of biological process modulation by symbiont of entry into host regulation of viral entry into host cell regulation of viral life cycle regulation of viral process positive regulation of viral entry into host cell positive regulation by symbiont of entry into host regulation of biological process involved in symbiotic interaction	cellular anatomical structure membrane virion component virion membrane host intracellular membrane-bounded organelle host cellular component host intracellular part host cell membrane other organism part host cell cytoplasm part host intracellular organelle host cell endoplasmic reticulum-Golgi intermediate compartment membrane host cell endoplasmic reticulum-Golgi intermediate compartment host cell cytoplasm cellular anatomical structure membrane virion component virion membrane host intracellular membrane-bounded organelle host cellular component host intracellular part host cell membrane other organism part host cell cytoplasm part host intracellular organelle host cell endoplasmic reticulum-Golgi intermediate compartment membrane host cell endoplasmic reticulum-Golgi intermediate compartment host cell cytoplasm host cell part host intracellular region viral membrane viral envelope host cell plasma membrane
A, B, C, D	Radixin	cell adhesion molecule binding cadherin binding protein binding binding protein kinase A binding ATPase binding enzyme binding protein domain specific binding RNA binding nucleic acid binding cytoskeletal protein binding actin binding	regulation of biosynthetic process regulation of biological process regulation of cellular process biological regulation positive regulation of biological process regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process positive regulation of macromolecule biosynthetic process regulation of gene expression positive regulation of metabolic process biosynthetic process positive regulation of gene expression positive regulation of biosynthetic process regulation of biosynthetic process regulation of biological process regulation of cellular process biological regulation positive regulation of biological process regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process positive regulation of macromolecule biosynthetic process regulation of gene expression positive regulation of metabolic process biosynthetic process positive regulation of gene expression positive regulation of biosynthetic process regulation of macromolecule biosynthetic process metabolic process cellular process positive regulation of macromolecule metabolic process macromolecule metabolic process regulation of metabolic process positive regulation of cellular process cellular component organization regulation of cellular component size cellular component organization or biogenesis regulation of biological quality regulation of cell size regulation of anatomical structure size regulation of cellular component organization organelle assembly regulation of cellular component biogenesis regulation of organelle organization cellular component biogenesis organelle organization cellular component assembly regulation of organelle assembly localization protein localization to cell periphery cellular localization protein localization to plasma membrane macromolecule localization intracellular protein localization localization within membrane protein localization to membrane negative regulation of hydrolase activity negative regulation of GTPase activity regulation of catalytic activity negative regulation of molecular function negative regulation of biological process negative regulation of catalytic activity regulation of GTPase activity regulation of molecular function regulation of hydrolase activity regulation of cell cycle phase transition cell cycle phase transition regulation of cell cycle G1/S phase transition cell cycle G1/S phase transition mitotic cell cycle regulation of mitotic cell cycle positive regulation of mitotic cell cycle phase transition positive regulation of cell cycle process positive regulation of mitotic cell cycle cell cycle regulation of cell cycle cell cycle process positive regulation of G1/S transition of mitotic cell cycle regulation of cell cycle process positive regulation of cell cycle regulation of mitotic cell cycle phase transition positive regulation of cell cycle G1/S phase transition mitotic cell cycle process regulation of G1/S transition of mitotic cell cycle positive regulation of cell cycle phase transition G1/S transition of mitotic cell cycle mitotic cell cycle phase transition plasma membrane bounded cell projection organization cell projection organization plasma membrane bounded cell projection assembly microvillus organization microvillus assembly cell projection assembly negative regulation of homotypic cell-cell adhesion regulation of homotypic cell-cell adhesion regulation of cell adhesion homotypic cell-cell adhesion negative regulation of cell adhesion cell adhesion cell-cell adhesion negative regulation of cell-cell adhesion negative regulation of cellular process regulation of cell-cell adhesion regulation of cytoskeleton organization regulation of actin filament-based process regulation of actin filament bundle assembly actin filament bundle organization actin filament-based process regulation of actin filament organization actin cytoskeleton organization actin filament organization regulation of actin cytoskeleton organization actin filament bundle assembly regulation of supramolecular fiber organization supramolecular fiber organization cytoskeleton organization cellular response to stimulus response to thyroid hormone response to stimulus response to endogenous stimulus cellular response to endogenous stimulus cellular response to chemical stimulus response to hormone response to chemical cellular response to thyroid hormone stimulus cellular response to hormone stimulus regulation of localization regulation of postsynaptic neurotransmitter receptor diffusion trapping neurotransmitter receptor diffusion trapping regulation of postsynaptic membrane neurotransmitter receptor levels regulation of cellular localization receptor diffusion trapping receptor localization to synapse postsynaptic neurotransmitter receptor diffusion trapping regulation of receptor localization to synapse protein-containing complex disassembly regulation of protein-containing complex disassembly actin filament depolymerization regulation of actin filament depolymerization actin filament capping negative regulation of supramolecular fiber organization negative regulation of actin filament polymerization cellular component disassembly barbed-end actin filament capping negative regulation of cellular component organization negative regulation of protein depolymerization negative regulation of protein-containing complex assembly regulation of protein polymerization regulation of protein-containing complex assembly negative regulation of protein-containing complex disassembly protein-containing complex assembly negative regulation of protein polymerization regulation of actin filament polymerization actin polymerization or depolymerization protein polymerization actin filament polymerization protein-containing complex organization regulation of protein depolymerization negative regulation of cytoskeleton organization regulation of actin polymerization or depolymerization negative regulation of organelle organization regulation of actin filament length negative regulation of actin filament depolymerization protein depolymerization apical protein localization cellular response to growth factor stimulus cellular response to platelet-derived growth factor stimulus response to growth factor response to platelet-derived growth factor regulation of signaling small GTPase-mediated signal transduction signaling regulation of small GTPase mediated signal transduction regulation of signal transduction regulation of Rap protein signal transduction intracellular signal transduction cell communication regulation of intracellular signal transduction regulation of response to stimulus intracellular signaling cassette regulation of cell communication signal transduction Rap protein signal transduction catabolic process positive regulation of protein metabolic process macromolecule catabolic process regulation of primary metabolic process protein metabolic process regulation of protein metabolic process primary metabolic process protein catabolic process regulation of catabolic process positive regulation of protein catabolic process positive regulation of catabolic process regulation of protein catabolic process positive regulation of protein localization to early endosome regulation of protein localization protein localization to endosome protein localization to early endosome regulation of protein localization to endosome protein localization to organelle positive regulation of protein localization positive regulation of protein localization to endosome regulation of protein localization to early endosome developmental process regulation of developmental process regulation of cell shape cell morphogenesis regulation of cell morphogenesis anatomical structure morphogenesis anatomical structure development regulation of anatomical structure morphogenesis epithelium development endothelial cell differentiation cellular developmental process endothelium development cell development tissue development epithelial cell differentiation endothelial cell development epithelial cell development cell differentiation establishment of endothelial barrier positive regulation of locomotion regulation of cell motility positive regulation of cell migration regulation of locomotion positive regulation of cell motility regulation of cell migration cell migration cell motility locomotion establishment of protein localization establishment of protein localization to membrane establishment of protein localization to plasma membrane establishment of localization adherens junction organization negative regulation of adherens junction organization regulation of adherens junction organization cell junction organization cell-cell junction organization positive regulation of early endosome to late endosome transport transport vesicle-mediated transport establishment of localization in cell positive regulation of intracellular transport regulation of intracellular transport regulation of transport intracellular transport regulation of vesicle-mediated transport endosomal transport vesicle-mediated transport between endosomal compartments regulation of early endosome to late endosome transport early endosome to late endosome transport positive regulation of transport ruffle organization regulation of cell projection organization regulation of cell projection assembly ruffle assembly regulation of plasma membrane bounded cell projection assembly regulation of ruffle assembly regulation of plasma membrane bounded cell projection organization negative regulation of cell size	cell projection cellular anatomical structure cell leading edge plasma membrane bounded cell projection lamellipodium cell periphery sarcolemma plasma membrane membrane T-tubule apical part of cell stereocilium base stereocilium actin-based cell projection cell projection cellular anatomical structure cell leading edge plasma membrane bounded cell projection lamellipodium cell periphery sarcolemma plasma membrane membrane T-tubule apical part of cell stereocilium base stereocilium actin-based cell projection organelle stereocilium bundle neuron projection cluster of actin-based cell projections extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region extracellular space vesicle extracellular membrane-bounded organelle cell-cell junction adherens junction anchoring junction cell junction ruffle microvillus filopodium midbody cell tip cell pole focal adhesion cell-substrate junction plasma membrane region apical plasma membrane cell division site cleavage furrow intracellular anatomical structure cell cortex cortical cytoskeleton intracellular membraneless organelle actin cytoskeleton intracellular organelle cytoskeleton membraneless organelle cortical actin cytoskeleton cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
E, F, G, H	IPR018548	Spike (S) protein S1 subunit, receptor-binding domain, betacoronavirus	Domain
E, F, G, H	IPR032500	Spike glycoprotein S1, N-terminal domain, betacoronavirus-like	Domain
E, F, G, H	IPR044376	Spike (S) protein S1 subunit, receptor-binding domain, MERS-CoV	Domain
E, F, G, H	IPR042578	Spike glycoprotein, betacoronavirus	Family
E, F, G, H	IPR036326	Spike S1 subunit, receptor binding domain superfamily, betacoronavirus	Homologous Superfamily
E, F, G, H	IPR043002	Spike glycoprotein, N-terminal domain superfamily	Homologous Superfamily
E, F, G, H	IPR044874	Spike glycoprotein S2, coronavirus, heptad repeat 2	Domain
E, F, G, H	IPR044337	Spike (S) protein S1 subunit, N-terminal domain, MERS-CoV-like	Domain
E, F, G, H	IPR043614	Spike glycoprotein S2, coronavirus, C-terminal	Domain
E, F, G, H	IPR044873	Spike glycoprotein S2, coronavirus, heptad repeat 1	Domain
E, F, G, H	IPR043473	Spike glycoprotein S2 superfamily, coronavirus	Homologous Superfamily
E, F, G, H	IPR043607	Coronavirus spike glycoprotein S1, C-terminal	Domain
E, F, G, H	IPR002552	Spike glycoprotein S2, coronavirus	Domain
A, B, C, D	IPR000299	FERM domain	Domain
A, B, C, D	IPR019748	FERM central domain	Domain
A, B, C, D	IPR018980	FERM, C-terminal PH-like domain	Domain
A, B, C, D	IPR000798	Ezrin/radixin/moesin-like	Family
A, B, C, D	IPR008954	Moesin tail domain superfamily	Homologous Superfamily
A, B, C, D	IPR035963	FERM superfamily, second domain	Homologous Superfamily
A, B, C, D	IPR011259	Ezrin/radixin/moesin, C-terminal	Domain
A, B, C, D	IPR019747	FERM conserved site	Conserved Site
A, B, C, D	IPR018979	FERM, N-terminal	Domain
A, B, C, D	IPR014352	FERM/acyl-CoA-binding protein superfamily	Homologous Superfamily
A, B, C, D	IPR041789	ERM family, FERM domain C-lobe	Domain
A, B, C, D	IPR011993	PH-like domain superfamily	Homologous Superfamily
A, B, C, D	IPR046810	Ezrin/radixin/moesin, alpha-helical domain	Domain
A, B, C, D	IPR019749	Band 4.1 domain	Domain
A, B, C, D	IPR011174	Ezrin/radixin/moesin	Family
A, B, C, D	IPR029071	Ubiquitin-like domain superfamily	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B, C, D	Pharos: P35241	autosomal recessive nonsyndromic deafness 24 nonsyndromic genetic deafness psoriasis cholestasis ovarian cancer pancreatic intraductal papillary-mucinous neoplasm plasma cell myeloma astrocytic tumor Gaucher disease hereditary spastic paraplegia malignant colon neoplasm medulloblastoma pancreatic ductal adenocarcinoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia primitive neuroectodermal tumor autosomal recessive nonsyndromic deafness 24 nonsyndromic genetic deafness psoriasis cholestasis ovarian cancer pancreatic intraductal papillary-mucinous neoplasm plasma cell myeloma astrocytic tumor Gaucher disease hereditary spastic paraplegia malignant colon neoplasm medulloblastoma pancreatic ductal adenocarcinoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia primitive neuroectodermal tumor ulcerative colitis atypical teratoid rhabdoid tumor dermatomyositis glioblastoma large cell medulloblastoma malignant ependymoma myocardial infarction osteosarcoma pancreatic intraductal papillary-mucinous carcinoma pilocytic astrocytoma progressive supranuclear palsy Down syndrome heart disease lung adenocarcinoma malignant glioma non-alcoholic fatty liver disease