8XP0 | pdb_00008xp0

Cryo-EM structure of the protomers of the C ring in the CCW state


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
D [auth P]SCOP2B SuperfamilySurface presentation of antigens (SPOA) 8058623 3001883 SCOP2B (2022-06-29)
E [auth Q]SCOP2B SuperfamilySurface presentation of antigens (SPOA) 8058623 3001883 SCOP2B (2022-06-29)
F [auth R]SCOP2B SuperfamilySurface presentation of antigens (SPOA) 8058623 3001883 SCOP2B (2022-06-29)
J [auth V]SCOP2B SuperfamilySurface presentation of antigens (SPOA) 8058623 3001883 SCOP2B (2022-06-29)
K [auth W]SCOP2B SuperfamilySurface presentation of antigens (SPOA) 8058623 3001883 SCOP2B (2022-06-29)
L [auth X]SCOP2B SuperfamilySurface presentation of antigens (SPOA) 8058623 3001883 SCOP2B (2022-06-29)
P [auth b]SCOP2B SuperfamilySurface presentation of antigens (SPOA) 8058623 3001883 SCOP2B (2022-06-29)
Q [auth c]SCOP2B SuperfamilySurface presentation of antigens (SPOA) 8058623 3001883 SCOP2B (2022-06-29)
R [auth d]SCOP2B SuperfamilySurface presentation of antigens (SPOA) 8058623 3001883 SCOP2B (2022-06-29)
C [auth O]SCOP2B SuperfamilySurface presentation of antigens (SPOA) 8091694 3001883 SCOP2B (2022-06-29)
I [auth U]SCOP2B SuperfamilySurface presentation of antigens (SPOA) 8091694 3001883 SCOP2B (2022-06-29)
O [auth a]SCOP2B SuperfamilySurface presentation of antigens (SPOA) 8091694 3001883 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
D [auth P]UCR_hingee8xp0P1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: UCR_hingeECOD (v295)
E [auth Q]UCR_hingee8xp0Q1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: UCR_hingeECOD (v295)
F [auth R]UCR_hingee8xp0R1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: UCR_hingeECOD (v295)
J [auth V]UCR_hingee8xp0V1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: UCR_hingeECOD (v295)
K [auth W]UCR_hingee8xp0W1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: UCR_hingeECOD (v295)
L [auth X]UCR_hingee8xp0X1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: UCR_hingeECOD (v295)
P [auth b]UCR_hingee8xp0b1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: UCR_hingeECOD (v295)
Q [auth c]UCR_hingee8xp0c1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: UCR_hingeECOD (v295)
R [auth d]UCR_hingee8xp0d1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: UCR_hingeECOD (v295)
C [auth O]UCR_hingee8xp0O1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: UCR_hingeECOD (v295)
I [auth U]UCR_hingee8xp0U1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: UCR_hingeECOD (v295)
O [auth a]UCR_hingee8xp0a1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: UCR_hingeECOD (v295)
B [auth N]UCR_hingee8xp0N1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: UCR_hingeECOD (v295)
H [auth T]UCR_hingee8xp0T1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: UCR_hingeECOD (v295)
N [auth Z]UCR_hingee8xp0Z1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: UCR_hingeECOD (v295)
A [auth M]UCR_hingee8xp0M1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: UCR_hingeECOD (v295)
G [auth S]UCR_hingee8xp0S1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: UCR_hingeECOD (v295)
M [auth Y]UCR_hingee8xp0Y1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: UCR_hingeECOD (v295)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF01052Type III flagellar switch regulator (C-ring) FliN C-term (FliMN_C)Type III flagellar switch regulator (C-ring) FliN C-termThis family includes the C-terminal region of flagellar motor switch proteins FliN and FliM. It is associated with family FliM, Pfam:PF02154 and family FliN_N Pfam:PF16973. Domain
C [auth O],
I [auth U],
O [auth a]
PF01052Type III flagellar switch regulator (C-ring) FliN C-term (FliMN_C)Type III flagellar switch regulator (C-ring) FliN C-termThis family includes the C-terminal region of flagellar motor switch proteins FliN and FliM. It is associated with family FliM, Pfam:PF02154 and family FliN_N Pfam:PF16973. Domain
C [auth O],
I [auth U],
O [auth a]
PF02154Flagellar motor switch protein FliM (FliM)Flagellar motor switch protein FliMDomain
A [auth M],
G [auth S],
M [auth Y]
PF01706FliG C-terminal domain (FliG_C)FliG C-terminal domainFliG is a component of the flageller rotor, present in about 25 copies per flagellum. This domain functions specifically in motor rotation. Domain
A [auth M],
G [auth S],
M [auth Y]
PF14841FliG middle domain (FliG_M)FliG middle domain- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Flagellar motor switch protein FliN
C [auth O],
I [auth U],
O [auth a]
Flagellar motor switch protein FliM
B [auth N],
H [auth T],
N [auth Z]
Flagellar M-ring protein
A [auth M],
G [auth S],
M [auth Y]
Flagellar motor switch protein FliG

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR001172Flagellar motor switch FliN/Type III secretion HrcQbFamily
IPR012826Flagellar motor switch FliNFamily
IPR036429SpoA-like superfamilyHomologous Superfamily
IPR001543Flagellar motor switch protein FliN-like, C-terminal domainDomain
IPR031576Flagellar motor switch protein FliN, N-terminalDomain
IPR051469Flagellar motor switch protein FliN/MopA/SpaOFamily
C [auth O],
I [auth U],
O [auth a]
IPR001543Flagellar motor switch protein FliN-like, C-terminal domainDomain
C [auth O],
I [auth U],
O [auth a]
IPR001689Flagellar motor switch protein FliMFamily
C [auth O],
I [auth U],
O [auth a]
IPR028976CheC-like superfamilyHomologous Superfamily
C [auth O],
I [auth U],
O [auth a]
IPR036429SpoA-like superfamilyHomologous Superfamily
B [auth N],
H [auth T],
N [auth Z]
IPR006182Flagellar M-ring, N-terminalDomain
B [auth N],
H [auth T],
N [auth Z]
IPR045851AMP-binding enzyme domain superfamilyHomologous Superfamily
B [auth N],
H [auth T],
N [auth Z]
IPR013556Flagellar M-ring C-terminalDomain
B [auth N],
H [auth T],
N [auth Z]
IPR043427Lipoprotein YscJ/Flagellar M-ring proteinFamily
B [auth N],
H [auth T],
N [auth Z]
IPR000067Flagellar M-ring protein FliFFamily
A [auth M],
G [auth S],
M [auth Y]
IPR011002Flagellar motor switch protein FliG, alpha-helicalHomologous Superfamily
A [auth M],
G [auth S],
M [auth Y]
IPR000090Flagellar motor switch protein FliGFamily
A [auth M],
G [auth S],
M [auth Y]
IPR028263Flagellar motor switch protein FliG, N-terminal domainDomain
A [auth M],
G [auth S],
M [auth Y]
IPR023087Flagellar motor switch protein FliG, C-terminalDomain
A [auth M],
G [auth S],
M [auth Y]
IPR032779Flagellar motor switch protein FliG, middle domainDomain