8XOU | pdb_00008xou

Prohead portal vertex of bacteriophage lambda

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
AA [auth C2]	SCOP2B Superfamily	Phage coat protein-like	8106222	3001529	SCOP2B (2022-06-29)
BA [auth D2]	SCOP2B Superfamily	Phage coat protein-like	8106222	3001529	SCOP2B (2022-06-29)
CA [auth E2]	SCOP2B Superfamily	Phage coat protein-like	8106222	3001529	SCOP2B (2022-06-29)
DA [auth F2]	SCOP2B Superfamily	Phage coat protein-like	8106222	3001529	SCOP2B (2022-06-29)
FA [auth G3]	SCOP2B Superfamily	Phage coat protein-like	8106222	3001529	SCOP2B (2022-06-29)
GA [auth C3]	SCOP2B Superfamily	Phage coat protein-like	8106222	3001529	SCOP2B (2022-06-29)
HA [auth D3]	SCOP2B Superfamily	Phage coat protein-like	8106222	3001529	SCOP2B (2022-06-29)
IA [auth E3]	SCOP2B Superfamily	Phage coat protein-like	8106222	3001529	SCOP2B (2022-06-29)
JA [auth F3]	SCOP2B Superfamily	Phage coat protein-like	8106222	3001529	SCOP2B (2022-06-29)
KA [auth A4]	SCOP2B Superfamily	Phage coat protein-like	8106222	3001529	SCOP2B (2022-06-29)
LA [auth G4]	SCOP2B Superfamily	Phage coat protein-like	8106222	3001529	SCOP2B (2022-06-29)
M [auth A0]	SCOP2B Superfamily	Phage coat protein-like	8106222	3001529	SCOP2B (2022-06-29)
MA [auth C4]	SCOP2B Superfamily	Phage coat protein-like	8106222	3001529	SCOP2B (2022-06-29)
N [auth G0]	SCOP2B Superfamily	Phage coat protein-like	8106222	3001529	SCOP2B (2022-06-29)
NA [auth D4]	SCOP2B Superfamily	Phage coat protein-like	8106222	3001529	SCOP2B (2022-06-29)
O [auth C0]	SCOP2B Superfamily	Phage coat protein-like	8106222	3001529	SCOP2B (2022-06-29)
OA [auth E4]	SCOP2B Superfamily	Phage coat protein-like	8106222	3001529	SCOP2B (2022-06-29)
PA [auth F4]	SCOP2B Superfamily	Phage coat protein-like	8106222	3001529	SCOP2B (2022-06-29)
Q [auth E0]	SCOP2B Superfamily	Phage coat protein-like	8106222	3001529	SCOP2B (2022-06-29)
R [auth F0]	SCOP2B Superfamily	Phage coat protein-like	8106222	3001529	SCOP2B (2022-06-29)
S [auth A1]	SCOP2B Superfamily	Phage coat protein-like	8106222	3001529	SCOP2B (2022-06-29)
T [auth G1]	SCOP2B Superfamily	Phage coat protein-like	8106222	3001529	SCOP2B (2022-06-29)
U [auth C1]	SCOP2B Superfamily	Phage coat protein-like	8106222	3001529	SCOP2B (2022-06-29)
V [auth D1]	SCOP2B Superfamily	Phage coat protein-like	8106222	3001529	SCOP2B (2022-06-29)
W [auth E1]	SCOP2B Superfamily	Phage coat protein-like	8106222	3001529	SCOP2B (2022-06-29)
X [auth F1]	SCOP2B Superfamily	Phage coat protein-like	8106222	3001529	SCOP2B (2022-06-29)
Y [auth A2]	SCOP2B Superfamily	Phage coat protein-like	8106222	3001529	SCOP2B (2022-06-29)
Z [auth G2]	SCOP2B Superfamily	Phage coat protein-like	8106222	3001529	SCOP2B (2022-06-29)
P [auth D0]	SCOP2B Superfamily	Phage coat protein-like	8106222	3001529	SCOP2B (2022-06-29)
EA [auth A3]	SCOP2B Superfamily	Phage coat protein-like	8106222	3001529	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
AA [auth C2]	UCR_hinge	e8xouC21	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: UCR_hinge	ECOD (v295)
BA [auth D2]	UCR_hinge	e8xouD21	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: UCR_hinge	ECOD (v295)
CA [auth E2]	UCR_hinge	e8xouE21	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: UCR_hinge	ECOD (v295)
DA [auth F2]	UCR_hinge	e8xouF21	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: UCR_hinge	ECOD (v295)
FA [auth G3]	UCR_hinge	e8xouG31	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: UCR_hinge	ECOD (v295)
GA [auth C3]	UCR_hinge	e8xouC31	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: UCR_hinge	ECOD (v295)
HA [auth D3]	UCR_hinge	e8xouD31	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: UCR_hinge	ECOD (v295)
IA [auth E3]	UCR_hinge	e8xouE31	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: UCR_hinge	ECOD (v295)
JA [auth F3]	UCR_hinge	e8xouF31	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: UCR_hinge	ECOD (v295)
KA [auth A4]	UCR_hinge	e8xouA41	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: UCR_hinge	ECOD (v295)
LA [auth G4]	UCR_hinge	e8xouG41	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: UCR_hinge	ECOD (v295)
M [auth A0]	UCR_hinge	e8xouA01	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: UCR_hinge	ECOD (v295)
MA [auth C4]	UCR_hinge	e8xouC41	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: UCR_hinge	ECOD (v295)
N [auth G0]	UCR_hinge	e8xouG01	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: UCR_hinge	ECOD (v295)
NA [auth D4]	UCR_hinge	e8xouD41	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: UCR_hinge	ECOD (v295)
O [auth C0]	UCR_hinge	e8xouC01	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: UCR_hinge	ECOD (v295)
OA [auth E4]	UCR_hinge	e8xouE41	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: UCR_hinge	ECOD (v295)
PA [auth F4]	UCR_hinge	e8xouF41	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: UCR_hinge	ECOD (v295)
Q [auth E0]	UCR_hinge	e8xouE01	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: UCR_hinge	ECOD (v295)
R [auth F0]	UCR_hinge	e8xouF01	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: UCR_hinge	ECOD (v295)
S [auth A1]	UCR_hinge	e8xouA11	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: UCR_hinge	ECOD (v295)
T [auth G1]	UCR_hinge	e8xouG11	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: UCR_hinge	ECOD (v295)
U [auth C1]	UCR_hinge	e8xouC11	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: UCR_hinge	ECOD (v295)
V [auth D1]	UCR_hinge	e8xouD11	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: UCR_hinge	ECOD (v295)
W [auth E1]	UCR_hinge	e8xouE11	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: UCR_hinge	ECOD (v295)
X [auth F1]	UCR_hinge	e8xouF11	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: UCR_hinge	ECOD (v295)
Y [auth A2]	UCR_hinge	e8xouA21	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: UCR_hinge	ECOD (v295)
Z [auth G2]	UCR_hinge	e8xouG21	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: UCR_hinge	ECOD (v295)
P [auth D0]	UCR_hinge	e8xouD01	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: UCR_hinge	ECOD (v295)
EA [auth A3]	UCR_hinge	e8xouA31	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: UCR_hinge	ECOD (v295)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth B], B [auth b], C [auth B1], D [auth b1], E [auth B2], A [auth B], B [auth b], C [auth B1], D [auth b1], E [auth B2], F [auth b2], G [auth B3], H [auth b3], I [auth B4], J [auth b4], K [auth B5], L [auth b5]	Portal protein B	DNA binding binding nucleic acid binding structural molecule activity	symbiont genome ejection through host cell envelope biological process involved in interspecies interaction between organisms symbiont genome ejection through host cell envelope, long flexible tail mechanism symbiont entry into host cell viral process symbiont entry into host viral life cycle biological process involved in interaction with host biological process involved in symbiotic interaction virion assembly	protein-containing complex viral capsid virion component viral portal complex
AA [auth C2], BA [auth D2], CA [auth E2], DA [auth F2], EA [auth A3], AA [auth C2], BA [auth D2], CA [auth E2], DA [auth F2], EA [auth A3], FA [auth G3], GA [auth C3], HA [auth D3], IA [auth E3], JA [auth F3], KA [auth A4], LA [auth G4], M [auth A0], MA [auth C4], N [auth G0], NA [auth D4], O [auth C0], OA [auth E4], P [auth D0], PA [auth F4], Q [auth E0], R [auth F0], S [auth A1], T [auth G1], U [auth C1], V [auth D1], W [auth E1], X [auth F1], Y [auth A2], Z [auth G2]	Major capsid protein	-	-	viral capsid icosahedral viral capsid T=7 icosahedral viral capsid virion component host cellular component host intracellular part cellular anatomical structure host cell cytoplasm host cell part host intracellular region other organism part

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth B], B [auth b], C [auth B1], D [auth b1], E [auth B2], A [auth B], B [auth b], C [auth B1], D [auth b1], E [auth B2], F [auth b2], G [auth B3], H [auth b3], I [auth B4], J [auth b4], K [auth B5], L [auth b5]	IPR006429	Phage portal protein, lambda family	Family
AA [auth C2], BA [auth D2], CA [auth E2], DA [auth F2], EA [auth A3], AA [auth C2], BA [auth D2], CA [auth E2], DA [auth F2], EA [auth A3], FA [auth G3], GA [auth C3], HA [auth D3], IA [auth E3], JA [auth F3], KA [auth A4], LA [auth G4], M [auth A0], MA [auth C4], N [auth G0], NA [auth D4], O [auth C0], OA [auth E4], P [auth D0], PA [auth F4], Q [auth E0], R [auth F0], S [auth A1], T [auth G1], U [auth C1], V [auth D1], W [auth E1], X [auth F1], Y [auth A2], Z [auth G2]	IPR005564	Major capsid protein GpE	Family

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.