8XKZ | pdb_00008xkz

Core region of the citrate-induced human acetyl-CoA carboxylase 1 filament (ACC1-citrate)

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth C], B [auth D]	PF21385	Acetyl-CoA carboxylase, BT domain (ACCA_BT)	Acetyl-CoA carboxylase, BT domain	This is the BC-CT interaction domain (BT) which is between the BC (biotin carboxylase, which catalyses the MgATP-dependent carboxylation of N1' atom of biotin) and BCCP (biotin carboxyl carrier protein) domains of Acetyl-CoA carboxylase. This domain ...	This is the BC-CT interaction domain (BT) which is between the BC (biotin carboxylase, which catalyses the MgATP-dependent carboxylation of N1' atom of biotin) and BCCP (biotin carboxyl carrier protein) domains of Acetyl-CoA carboxylase. This domain helps to mediate interactions between the BC and CT (carboxyltransferase) domains [1-3].	Domain
A [auth C], B [auth D]	PF00364	Biotin-requiring enzyme (Biotin_lipoyl)	Biotin-requiring enzyme	This family covers two Prosite entries, the conserved lysine residue binds biotin in one group and lipoic acid in the other. Note that the HMM does not currently recognise the Glycine cleavage system H proteins.	Domain
A [auth C], B [auth D]	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain (CPSase_L_D2)	Carbamoyl-phosphate synthase L chain, ATP binding domain	Carbamoyl-phosphate synthase catalyses the ATP-dependent synthesis of carbamyl-phosphate from glutamine or ammonia and bicarbonate. This important enzyme initiates both the urea cycle and the biosynthesis of arginine and/or pyrimidines [2]. The c ...	Carbamoyl-phosphate synthase catalyses the ATP-dependent synthesis of carbamyl-phosphate from glutamine or ammonia and bicarbonate. This important enzyme initiates both the urea cycle and the biosynthesis of arginine and/or pyrimidines [2]. The carbamoyl-phosphate synthase (CPS) enzyme in prokaryotes is a heterodimer of a small and large chain. The small chain promotes the hydrolysis of glutamine to ammonia, which is used by the large chain to synthesise carbamoyl phosphate. See Pfam:PF00988. The small chain has a GATase domain in the carboxyl terminus. See Pfam:PF00117. The ATP binding domain (this one) has an ATP-grasp fold.	Domain
A [auth C], B [auth D]	PF00289	Biotin carboxylase, N-terminal domain (Biotin_carb_N)	Biotin carboxylase, N-terminal domain	This domain is structurally related to the PreATP-grasp domain. The family contains the N-terminus of biotin carboxylase enzymes [1,3], and propionyl-CoA carboxylase A chain [2].	Domain
A [auth C], B [auth D]	PF02785	Biotin carboxylase C-terminal domain (Biotin_carb_C)	Biotin carboxylase C-terminal domain	Biotin carboxylase is a component of the acetyl-CoA carboxylase multi-component enzyme which catalyses the first committed step in fatty acid synthesis in animals, plants and bacteria. Most of the active site residues reported in reference [1] are in ...	Biotin carboxylase is a component of the acetyl-CoA carboxylase multi-component enzyme which catalyses the first committed step in fatty acid synthesis in animals, plants and bacteria. Most of the active site residues reported in reference [1] are in this C-terminal domain.	Domain
A [auth C], B [auth D]	PF08326	Acetyl-CoA carboxylase, central region (ACC_central)	Acetyl-CoA carboxylase, central region	-	Family
A [auth C], B [auth D]	PF01039	Carboxyl transferase domain (Carboxyl_trans)	Carboxyl transferase domain	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth C], B [auth D]	Acetyl-CoA carboxylase 1	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding CoA carboxylase activity acetyl-CoA carboxylase activity ligase activity, forming carbon-carbon bonds catalytic activity ligase activity cation binding metal ion binding identical protein binding protein binding	malonyl-CoA metabolic process nucleobase-containing compound metabolic process acyl-CoA metabolic process nucleobase-containing small molecule metabolic process purine-containing compound biosynthetic process acyl-CoA biosynthetic process malonyl-CoA biosynthetic process phosphate-containing compound metabolic process sulfur compound metabolic process small molecule metabolic process amide metabolic process phosphorus metabolic process nucleoside phosphate metabolic process primary metabolic process malonyl-CoA metabolic process nucleobase-containing compound metabolic process acyl-CoA metabolic process nucleobase-containing small molecule metabolic process purine-containing compound biosynthetic process acyl-CoA biosynthetic process malonyl-CoA biosynthetic process phosphate-containing compound metabolic process sulfur compound metabolic process small molecule metabolic process amide metabolic process phosphorus metabolic process nucleoside phosphate metabolic process primary metabolic process amide biosynthetic process nucleobase-containing compound biosynthetic process purine-containing compound metabolic process sulfur compound biosynthetic process biosynthetic process organophosphate metabolic process organophosphate biosynthetic process nucleoside phosphate biosynthetic process metabolic process cellular process chemical homeostasis homeostatic process lipid homeostasis protein-containing complex organization protein homotetramerization cellular component organization cellular component biogenesis cellular component assembly protein complex oligomerization protein tetramerization protein-containing complex assembly protein homooligomerization cellular component organization or biogenesis lipid biosynthetic process fatty-acyl-CoA biosynthetic process fatty-acyl-CoA metabolic process fatty acid derivative biosynthetic process fatty acid derivative metabolic process lipid metabolic process cellular response to stimulus response to ketone response to prostaglandin response to lipid response to stimulus response to endogenous stimulus response to alcohol cellular response to prostaglandin stimulus response to oxygen-containing compound cellular response to oxygen-containing compound cellular response to endogenous stimulus cellular response to prostaglandin E stimulus cellular response to chemical stimulus cellular response to alcohol response to hormone response to chemical cellular response to lipid response to prostaglandin E cellular response to ketone cellular response to hormone stimulus fatty acid metabolic process monocarboxylic acid biosynthetic process small molecule biosynthetic process oxoacid metabolic process carboxylic acid metabolic process organic acid biosynthetic process organic acid metabolic process fatty acid biosynthetic process carboxylic acid biosynthetic process monocarboxylic acid metabolic process multicellular organismal process multicellular organismal-level homeostasis anatomical structure homeostasis tissue homeostasis acetyl-CoA metabolic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle cytoskeleton membraneless organelle intracellular membraneless organelle actin cytoskeleton cytosol nucleus membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle cytoskeleton membraneless organelle intracellular membraneless organelle actin cytoskeleton cytosol nucleus membrane-enclosed lumen nucleolus intracellular organelle lumen organelle lumen fibrillar center nuclear lumen

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth C], B [auth D]	IPR011763	Acetyl-coenzyme A carboxyltransferase, C-terminal	Domain
A [auth C], B [auth D]	IPR029045	ClpP/crotonase-like domain superfamily	Homologous Superfamily
A [auth C], B [auth D]	IPR011762	Acetyl-coenzyme A carboxyltransferase, N-terminal	Domain
A [auth C], B [auth D]	IPR049074	Acetyl-CoA carboxylase, BT domain	Domain
A [auth C], B [auth D]	IPR011764	Biotin carboxylation domain	Domain
A [auth C], B [auth D]	IPR005479	Carbamoyl phosphate synthase, ATP-binding domain	Domain
A [auth C], B [auth D]	IPR034733	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta	Domain
A [auth C], B [auth D]	IPR049076	Acetyl-CoA carboxylase	Family
A [auth C], B [auth D]	IPR011054	Rudiment single hybrid motif	Homologous Superfamily
A [auth C], B [auth D]	IPR013537	Acetyl-CoA carboxylase, central domain	Domain
A [auth C], B [auth D]	IPR011053	Single hybrid motif	Homologous Superfamily
A [auth C], B [auth D]	IPR001882	Biotin-binding site	Binding Site
A [auth C], B [auth D]	IPR000089	Biotin/lipoyl attachment	Domain
A [auth C], B [auth D]	IPR005481	Biotin carboxylase-like, N-terminal domain	Domain
A [auth C], B [auth D]	IPR011761	ATP-grasp fold	Domain
A [auth C], B [auth D]	IPR013815	ATP-grasp fold, subdomain 1	Homologous Superfamily
A [auth C], B [auth D]	IPR005482	Biotin carboxylase, C-terminal	Domain
A [auth C], B [auth D]	IPR016185	Pre-ATP-grasp domain superfamily	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A [auth C], B [auth D]	Pharos: Q13085	acetyl-coa carboxylase deficiency congestive heart failure Heart Decompensation hepatocellular carcinoma malignant mesothelioma spina bifida colorectal cancer heart failure interstitial cystitis large cell medulloblastoma lung cancer pituitary cancer

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.