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 8X9Z | pdb_00008x9z

P-hexon capsomer of the VZV C-Capsid

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
C [auth F]e8x9zF4 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF:ECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
G [auth J]PF03122Herpes virus major capsid protein (Herpes_MCP)Herpes virus major capsid protein- Family
B [auth E]PF03122Herpes virus major capsid protein (Herpes_MCP)Herpes virus major capsid protein- Family
A,
C [auth F],
D [auth G],
E [auth H],
F [auth I]		PF03122Herpes virus major capsid protein (Herpes_MCP)Herpes virus major capsid protein- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
S [auth P],
T [auth a]		Tri2A---
Q [auth n],
R [auth o]		Large tegument protein deneddylase
P [auth m]Capsid vertex component 2-
O [auth l]Capsid vertex component 2-
N [auth k]CVC1---
Small capsomere-interacting protein-
G [auth J]Major capsid protein -
B [auth E]Major capsid protein -
W [auth c],
X [auth h]		Tri1---
U [auth V],
V [auth b]		Tri2A---
A,
C [auth F],
D [auth G],
E [auth H],
F [auth I]		Major capsid protein -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
Q [auth n],
R [auth o]		IPR005210Herpesvirus large tegument protein deneddylaseDomain
Q [auth n],
R [auth o]		IPR006928Herpesvirus large tegument protein, USP domainDomain
Q [auth n],
R [auth o]		IPR034702Large tegument protein deneddylaseFamily
Q [auth n],
R [auth o]		IPR038765Papain-like cysteine peptidase superfamilyHomologous Superfamily
P [auth m]IPR002493Capsid vertex component 2Family
O [auth l]IPR002493Capsid vertex component 2Family
IPR007584Herpesvirus UL35Family
G [auth J]IPR000912Herpesvirus major capsid proteinFamily
G [auth J]IPR023233Herpesvirus major capsid protein, upper domain superfamilyHomologous Superfamily
B [auth E]IPR000912Herpesvirus major capsid proteinFamily
B [auth E]IPR023233Herpesvirus major capsid protein, upper domain superfamilyHomologous Superfamily
A,
C [auth F],
D [auth G],
E [auth H],
F [auth I]		IPR000912Herpesvirus major capsid proteinFamily
A,
C [auth F],
D [auth G],
E [auth H],
F [auth I]		IPR023233Herpesvirus major capsid protein, upper domain superfamilyHomologous Superfamily