8WLN | pdb_00008wln

Cryo-EM structure of the MS ring with export apparatus and proximal rod within the motor-hook complex in the CCW state

External Resource: Annotation


Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF08345Flagellar M-ring protein C-terminal (YscJ_FliF_C)Flagellar M-ring protein C-terminalThis is the RBM3/beta-collar domain found in bacterial flagellar M-ring (FliF) proteins [1] which also have the YscJ/FliF domain (Pfam:PF01514) at the N-terminal. Domain
PF02049Flagellar hook-basal body complex protein FliE (FliE)Flagellar hook-basal body complex protein FliE- Family
TB [auth A],
UB [auth B],
VB [auth C],
WB [auth D]		PF00460Flagella basal body rod protein (Flg_bb_rod)Flagella basal body rod protein- Family
TB [auth A],
UB [auth B],
VB [auth C],
WB [auth D]		PF06429Flagellar basal body rod FlgEFG protein C-terminal (Flg_bbr_C)Flagellar basal body rod FlgEFG protein C-terminalThis family consists of a number of C-terminal domains of unknown function. This domain seems to be specific to flagellar basal-body rod and flagellar hook proteins in which Pfam:PF00460 is often present at the extreme N terminus. Domain
TB [auth A],
UB [auth B],
VB [auth C],
WB [auth D]		PF01313Bacterial export proteins, family 3 (Bac_export_3)Bacterial export proteins, family 3- Family
XB [auth E]PF01311Bacterial export proteins, family 1 (Bac_export_1)Bacterial export proteins, family 1- Family
AC [auth H],
BC [auth I],
CC [auth J],
YB [auth F],
ZB [auth G]		PF00813FliP family (FliP)FliP family- Family
DC [auth Q],
EC [auth R],
FC [auth S],
GC [auth T],
HC [auth U]		PF00460Flagella basal body rod protein (Flg_bb_rod)Flagella basal body rod protein- Family
PF00460Flagella basal body rod protein (Flg_bb_rod)Flagella basal body rod protein- Family
PF06429Flagellar basal body rod FlgEFG protein C-terminal (Flg_bbr_C)Flagellar basal body rod FlgEFG protein C-terminalThis family consists of a number of C-terminal domains of unknown function. This domain seems to be specific to flagellar basal-body rod and flagellar hook proteins in which Pfam:PF00460 is often present at the extreme N terminus. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Flagellar M-ring protein
Flagellar hook-basal body complex protein FliE
TB [auth A],
UB [auth B],
VB [auth C],
WB [auth D]		Flagellar biosynthetic protein FliQ-
XB [auth E]Flagellar biosynthetic protein FliR-
AC [auth H],
BC [auth I],
CC [auth J],
YB [auth F],
ZB [auth G]		Flagellar biosynthetic protein FliP-
DC [auth Q],
EC [auth R],
FC [auth S],
GC [auth T],
HC [auth U]		Flagellar basal body rod protein FlgB-
Flagellar basal-body rod protein FlgC-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR045851AMP-binding enzyme, C-terminal domain superfamilyHomologous Superfamily
IPR006182Flagellar M-ring, N-terminalDomain
IPR013556Flagellar M-ring C-terminalDomain
IPR043427Lipoprotein YscJ/Flagellar M-ring proteinFamily
IPR000067Flagellar M-ring protein FliFFamily
IPR001624Flagellar hook-basal body complex protein FliEFamily
TB [auth A],
UB [auth B],
VB [auth C],
WB [auth D]		IPR006305Flagellar biosynthesis protein FliQFamily
TB [auth A],
UB [auth B],
VB [auth C],
WB [auth D]		IPR002191Bacterial export protein family 3Family
XB [auth E]IPR002010Type III secretion system inner membrane R proteinFamily
XB [auth E]IPR006303Flagellar biosynthesis protein FliRFamily
AC [auth H],
BC [auth I],
CC [auth J],
YB [auth F],
ZB [auth G]		IPR005838Type III secretion system inner membrane P proteinFamily
AC [auth H],
BC [auth I],
CC [auth J],
YB [auth F],
ZB [auth G]		IPR005837Flagellar transport protein FliPFamily
DC [auth Q],
EC [auth R],
FC [auth S],
GC [auth T],
HC [auth U]		IPR019776Flagellar basal body rod protein, conserved siteConserved Site
DC [auth Q],
EC [auth R],
FC [auth S],
GC [auth T],
HC [auth U]		IPR001444Flagellar basal body rod protein, N-terminalDomain
DC [auth Q],
EC [auth R],
FC [auth S],
GC [auth T],
HC [auth U]		IPR006300Flagellar basal-body rod protein FlgBFamily
IPR019776Flagellar basal body rod protein, conserved siteConserved Site
IPR006299Flagellar basal-body rod protein FlgCFamily
IPR010930Flagellar basal-body/hook protein, C-terminal domainDomain
IPR001444Flagellar basal body rod protein, N-terminalDomain

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

ChainsResource LinkGroupSubgroupProtein
mpstrucTRANSMEMBRANE PROTEINS: ALPHA-HELICALFlagellar Motor Proteinsintact flagellar motor-hook complex, CW state