8WB4 | pdb_00008wb4

Structure of PSII-ACPII supercomplex from cryptophyte algae


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
J [auth D]Cytochrom_B559ae8wb4D01 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cytochrom_B559aECOD (v295)
CA [auth d]e8wb4d1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
ZA [auth a]e8wb4a1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
I [auth A]Cytochrom_B559ae8wb4A01 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cytochrom_B559aECOD (v295)
YA [auth P]e8wb4P1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
H [auth 6]Cytochrom_B559ae8wb4601 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cytochrom_B559aECOD (v295)
G [auth 5]Cytochrom_B559ae8wb4501 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cytochrom_B559aECOD (v295)
BB [auth p]e8wb4p1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
RA [auth 0]e8wb401 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
F [auth 4]Cytochrom_B559ae8wb4401 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cytochrom_B559aECOD (v295)
UA [auth 9]e8wb491 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
E [auth 3]Cytochrom_B559ae8wb4301 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cytochrom_B559aECOD (v295)
HB [auth W]e8wb4W1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
GB [auth w]e8wb4w01 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
TA [auth 8]e8wb481 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
D [auth 2]Cytochrom_B559ae8wb4201 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cytochrom_B559aECOD (v295)
XA [auth L]e8wb4L1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
JA [auth l]e8wb4l01 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
FB [auth B]e8wb4B2 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
AA [auth b]Cytochrom_B559ae8wb4b02 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cytochrom_B559aECOD (v295)
ZChloroa_b-binde8wb4Z01 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Chloroa_b-bindECOD (v295)
QA [auth z]LRRNT,LRR_8e8wb4z1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: LRRNT,LRR_8ECOD (v295)
YChloroa_b-binde8wb4Y01 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Chloroa_b-bindECOD (v295)
PA [auth y]e8wb4y1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
Xe8wb4X01 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
OA [auth x]e8wb4x1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
W [auth V]e8wb4V01 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
NA [auth v]e8wb4v1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
U [auth T]e8wb4T01 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
EB [auth t]e8wb4t1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
SA [auth 7]e8wb471 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
C [auth 1]Cytochrom_B559ae8wb4101 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cytochrom_B559aECOD (v295)
Q [auth O]e8wb4O01 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
KA [auth o]e8wb4o1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
P [auth K]e8wb4K01 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
IA [auth k]e8wb4k1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
O [auth J]e8wb4J01 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
HA [auth j]e8wb4j1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
N [auth I]e8wb4I01 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
GA [auth i]e8wb4i1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
M [auth H]e8wb4H01 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
AB [auth h]e8wb4h1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
L [auth F]e8wb4F01 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
EA [auth f]e8wb4f1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
K [auth E]Cytochrom_B559ae8wb4E01 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cytochrom_B559aECOD (v295)
DA [auth e]e8wb4e1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
B [auth M]e8wb4M1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
A [auth m]e8wb4m01 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
CA [auth d],
J [auth D]
Photosystem II D2 protein
I [auth A],
ZA [auth a]
Photosystem II protein D1
H [auth 6],
YA [auth P]
ACPII-6---
BB [auth p],
G [auth 5]
ACPII-5---
F [auth 4],
RA [auth 0]
ACPII-4---
E [auth 3],
UA [auth 9]
ACPII-3---
GB [auth w],
HB [auth W]
Photosystem II reaction center protein W---
D [auth 2],
TA [auth 8]
ACPII-2---
JA [auth l],
XA [auth L]
Photosystem II reaction center protein L-
FA [auth g],
WA [auth G]
Photosystem II reaction center protein G---
BA [auth c],
VA [auth C]
Photosystem II CP43 reaction center protein
AA [auth b],
FB [auth B]
Photosystem II CP47 reaction center protein
QA [auth z],
Z
Photosystem II reaction center protein Z-
PA [auth y],
Y
Photosystem II reaction center protein Ycf12-
OA [auth x],
X
Photosystem II reaction center X protein-
NA [auth v],
W [auth V]
Photosystem II cytochrome c550
MA [auth u],
V [auth U]
Photosystem II reaction center protein U---
EB [auth t],
U [auth T]
Photosystem II reaction center protein T-
C [auth 1],
SA [auth 7]
ACPII-1---
DB [auth s],
T [auth S]
CCPII-S---
LA [auth r],
S [auth R]
Photosystem II reaction center protein R---
CB [auth q],
R [auth Q]
Photosystem II reaction center protein Q---
KA [auth o],
Q [auth O]
Photosystem II reaction center protein O---
IA [auth k],
P [auth K]
Photosystem II reaction center protein K-
HA [auth j],
O [auth J]
Photosystem II reaction center protein J-
GA [auth i],
N [auth I]
Photosystem II reaction center protein I-
AB [auth h],
M [auth H]
Photosystem II reaction center protein H
EA [auth f],
L [auth F]
Cytochrome b559 subunit beta
DA [auth e],
K [auth E]
Cytochrome b559 subunit alpha
A [auth m],
B [auth M]
Photosystem II reaction center M-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
CA [auth d],
J [auth D]
IPR005868Photosystem II D2Family
CA [auth d],
J [auth D]
IPR036854Photosystem II protein D1/D2 superfamilyHomologous Superfamily
CA [auth d],
J [auth D]
IPR000484Photosynthetic reaction centre, L/MFamily
CA [auth d],
J [auth D]
IPR055265Photosynthetic reaction centre, L/M, conserved siteConserved Site
CA [auth d],
J [auth D]
IPR055266Photosystem II protein D1/D2Family
I [auth A],
ZA [auth a]
IPR036854Photosystem II protein D1/D2 superfamilyHomologous Superfamily
I [auth A],
ZA [auth a]
IPR005867Photosystem II protein D1Family
I [auth A],
ZA [auth a]
IPR000484Photosynthetic reaction centre, L/MFamily
I [auth A],
ZA [auth a]
IPR055265Photosynthetic reaction centre, L/M, conserved siteConserved Site
I [auth A],
ZA [auth a]
IPR055266Photosystem II protein D1/D2Family
JA [auth l],
XA [auth L]
IPR003372Photosystem II PsbLFamily
JA [auth l],
XA [auth L]
IPR037266Photosystem II PsbL superfamilyHomologous Superfamily
BA [auth c],
VA [auth C]
IPR036001Photosystem antenna protein-like superfamilyHomologous Superfamily
BA [auth c],
VA [auth C]
IPR000932Photosystem antenna protein-likeFamily
BA [auth c],
VA [auth C]
IPR005869Photosystem II CP43 reaction centre proteinFamily
BA [auth c],
VA [auth C]
IPR044900Photosystem II CP43 reaction centre protein superfamilyHomologous Superfamily
AA [auth b],
FB [auth B]
IPR036001Photosystem antenna protein-like superfamilyHomologous Superfamily
AA [auth b],
FB [auth B]
IPR000932Photosystem antenna protein-likeFamily
AA [auth b],
FB [auth B]
IPR017486Photosystem II CP47 reaction centre proteinFamily
QA [auth z],
Z
IPR036512Photosystem II PsbZ superfamilyHomologous Superfamily
QA [auth z],
Z
IPR002644Photosystem II PsbZ, reaction centreFamily
PA [auth y],
Y
IPR010284Photosystem II reaction center protein Ycf12Family
OA [auth x],
X
IPR009518Photosystem II PsbXFamily
OA [auth x],
X
IPR023431Photosystem II PsbX, type 1 subfamilyFamily
NA [auth v],
W [auth V]
IPR017851Photosystem II extrinsic protein V, cytochrome c-550 precursorFamily
NA [auth v],
W [auth V]
IPR016003Photosystem II extrinsic protein V, cytochrome c-550 precursor-likeFamily
NA [auth v],
W [auth V]
IPR036909Cytochrome c-like domain superfamilyHomologous Superfamily
NA [auth v],
W [auth V]
IPR009056Cytochrome c-like domainDomain
NA [auth v],
W [auth V]
IPR029490Cytochrome c-550 domainDomain
EB [auth t],
U [auth T]
IPR001743Photosystem II PsbTFamily
EB [auth t],
U [auth T]
IPR037268Photosystem II PsbT superfamilyHomologous Superfamily
IA [auth k],
P [auth K]
IPR037270Photosystem II PsbK superfamilyHomologous Superfamily
IA [auth k],
P [auth K]
IPR003687Photosystem II PsbKFamily
HA [auth j],
O [auth J]
IPR002682Photosystem II PsbJFamily
HA [auth j],
O [auth J]
IPR037267Photosystem II PsbJ superfamilyHomologous Superfamily
GA [auth i],
N [auth I]
IPR037271Photosystem II PsbI superfamilyHomologous Superfamily
GA [auth i],
N [auth I]
IPR003686Photosystem II PsbIFamily
AB [auth h],
M [auth H]
IPR036863Photosystem II reaction centre protein H superfamilyHomologous Superfamily
AB [auth h],
M [auth H]
IPR001056Photosystem II reaction centre protein HFamily
EA [auth f],
L [auth F]
IPR006241Photosystem II cytochrome b559, beta subunitFamily
EA [auth f],
L [auth F]
IPR013081Photosystem II cytochrome b559, N-terminalDomain
EA [auth f],
L [auth F]
IPR006216Photosystem II cytochrome b559, conserved siteConserved Site
DA [auth e],
K [auth E]
IPR013081Photosystem II cytochrome b559, N-terminalDomain
DA [auth e],
K [auth E]
IPR006217Photosystem II cytochrome b559, alpha subunitFamily
DA [auth e],
K [auth E]
IPR013082Photosystem II cytochrome b559, alpha subunit, lumenal regionDomain
DA [auth e],
K [auth E]
IPR037025Photosystem II cytochrome b559, alpha subunit superfamilyHomologous Superfamily
DA [auth e],
K [auth E]
IPR006216Photosystem II cytochrome b559, conserved siteConserved Site
A [auth m],
B [auth M]
IPR007826Photosystem II PsbMFamily
A [auth m],
B [auth M]
IPR037269Photosystem II PsbM superfamilyHomologous Superfamily