Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyMHC antigen-recognition domain8034484 3000521 SCOP2B (2021-05-27)
BSCOP2B SuperfamilyImmunoglobulin (Ig) domain-like8055664 3000071 SCOP2B (2021-05-27)
ESCOP2B SuperfamilyMHC antigen-recognition domain8034484 3000521 SCOP2B (2021-05-27)
ESCOP2B SuperfamilyImmunoglobulin (Ig) domain-like8055664 3000071 SCOP2B (2021-05-27)
HSCOP2B SuperfamilyImmunoglobulin (Ig) domain-like8055664 3000071 SCOP2B (2021-05-27)
HSCOP2B SuperfamilyMHC antigen-recognition domain8034484 3000521 SCOP2B (2021-05-27)
ASCOP2B SuperfamilyImmunoglobulin (Ig) domain-like8054679 3000071 SCOP2B (2021-05-27)
ASCOP2B SuperfamilyMHC antigen-recognition domain8041502 3000521 SCOP2B (2021-05-27)
DSCOP2B SuperfamilyImmunoglobulin (Ig) domain-like8054679 3000071 SCOP2B (2021-05-27)
DSCOP2B SuperfamilyMHC antigen-recognition domain8041502 3000521 SCOP2B (2021-05-27)
GSCOP2B SuperfamilyImmunoglobulin (Ig) domain-like8054679 3000071 SCOP2B (2021-05-27)
GSCOP2B SuperfamilyMHC antigen-recognition domain8041502 3000521 SCOP2B (2021-05-27)
CSCOP2B SuperfamilyCLIP-like8051846 3002039 SCOP2B (2021-05-27)
FSCOP2B SuperfamilyCLIP-like8051846 3002039 SCOP2B (2021-05-27)
ISCOP2B SuperfamilyCLIP-like8051846 3002039 SCOP2B (2021-05-27)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
B, E, H
PF00969Class II histocompatibility antigen, beta domain (MHC_II_beta)Class II histocompatibility antigen, beta domain- Domain
B, E, H
PF07654Immunoglobulin C1-set domain (C1-set)Immunoglobulin C1-set domain- Domain
A, D, G
PF07654Immunoglobulin C1-set domain (C1-set)Immunoglobulin C1-set domain- Domain
A, D, G
PF00993Class II histocompatibility antigen, alpha domain (MHC_II_alpha)Class II histocompatibility antigen, alpha domain- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B, E, H
HLA class II histocompatibility antigen, DQ beta 1 chain
A, D, G
HLA class II histocompatibility antigen, DQ alpha 1 chain
C, F, I
HLA class II histocompatibility antigen gamma chain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
B, E, H
IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
B, E, H
IPR003597Immunoglobulin C1-setDomain
B, E, H
IPR011162MHC classes I/II-like antigen recognition proteinHomologous Superfamily
B, E, H
IPR003006Immunoglobulin/major histocompatibility complex, conserved siteConserved Site
B, E, H
IPR000353MHC class II, beta chain, N-terminalDomain
B, E, H
IPR014745MHC class II, alpha/beta chain, N-terminalHomologous Superfamily
B, E, H
IPR013783Immunoglobulin-like foldHomologous Superfamily
B, E, H
IPR007110Immunoglobulin-like domainDomain
A, D, G
IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
A, D, G
IPR003597Immunoglobulin C1-setDomain
A, D, G
IPR011162MHC classes I/II-like antigen recognition proteinHomologous Superfamily
A, D, G
IPR003006Immunoglobulin/major histocompatibility complex, conserved siteConserved Site
A, D, G
IPR014745MHC class II, alpha/beta chain, N-terminalHomologous Superfamily
A, D, G
IPR013783Immunoglobulin-like foldHomologous Superfamily
A, D, G
IPR007110Immunoglobulin-like domainDomain
A, D, G
IPR001003MHC class II, alpha chain, N-terminalDomain
C, F, I
IPR022339MHC class II-associated invariant chainFamily
C, F, I
IPR000716Thyroglobulin type-1Domain
C, F, I
IPR043530HLA class II histocompatibility antigen, gamma subunitFamily
C, F, I
IPR015386MHC class II-associated invariant chain/CLIP, MHC II-interactingDomain
C, F, I
IPR036613MHC class II-associated invariant chain, trimerisation domain superfamilyHomologous Superfamily
C, F, I
IPR036857Thyroglobulin type-1 superfamilyHomologous Superfamily
C, F, I
IPR011988MHC class II-associated invariant chain, trimerisationDomain

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
B, E, H
PharosP01920
A, D, G
PharosP01909
C, F, I
PharosP04233

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

ChainsExternal LinkComment
A, B, C, D, E
PDBTMAnnotated as membrane protein by PDBTM