8VOA | pdb_00008voa

Cryo-EM structure of fascin crosslinked F-actin (Eigen_right)


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
GSCOP2B SuperfamilyActin-like ATPases 8043436 3000092 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyActin-like ATPases 8043438 3000092 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyActin-like ATPases 8043438 3000092 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyActin-like ATPases 8043436 3000092 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyActin-like ATPases 8043438 3000092 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyActin-like ATPases 8043436 3000092 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyActin-like ATPases 8043438 3000092 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyActin-like ATPases 8043436 3000092 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyActin-like ATPases 8043438 3000092 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyActin-like ATPases 8043436 3000092 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyActin-like ATPases 8043436 3000092 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyActin-like ATPases 8043438 3000092 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyActin-crosslinking proteins 8042040 3000731 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyActin-crosslinking proteins 8042039 3000731 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyActin-crosslinking proteins 8042041 3000731 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyActin-crosslinking proteins 8042042 3000731 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
B, C, D, E, F
PF00022Actin (Actin)Actin- Family
PF06268Fascin domain (Fascin)Fascin domainThis family consists of several eukaryotic fascin or singed proteins. The fascins are a structurally unique and evolutionarily conserved group of actin cross-linking proteins. Fascins function in the organisation of two major forms of actin-based st ...This family consists of several eukaryotic fascin or singed proteins. The fascins are a structurally unique and evolutionarily conserved group of actin cross-linking proteins. Fascins function in the organisation of two major forms of actin-based structures: dynamic, cortical cell protrusions and cytoplasmic microfilament bundles. The cortical structures, which include filopodia, spikes, lamellipodial ribs, oocyte microvilli and the dendrites of dendritic cells, have roles in cell-matrix adhesion, cell interactions and cell migration, whereas the cytoplasmic actin bundles appear to participate in cell architecture [1]. Dictyostelium hisactophilin, another actin-binding protein, is a submembranous pH sensor that signals slight changes of the H+ concentration to actin by inducing actin polymerisation and binding to microfilaments only at pH values below seven [1]. Members of this family are histidine rich, typically contain the repeated motif of HHXH [3].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B, C, D, E, F
Actin, alpha skeletal muscle
Fascin

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
B, C, D, E, F
IPR020902Actin/actin-like conserved siteConserved Site
B, C, D, E, F
IPR004001Actin, conserved siteConserved Site
B, C, D, E, F
IPR043129ATPase, nucleotide binding domainHomologous Superfamily
B, C, D, E, F
IPR004000Actin familyFamily
IPR024703Fascin, metazoansFamily
IPR010431FascinFamily
IPR022768Fascin-like domainDomain
IPR008999Actin-crosslinkingHomologous Superfamily

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
B, C, D, E, F
HIC Parent Component: HIS

RESIDAA0317

PSI-MOD :  1'-methyl-L-histidine MOD:00322