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Data API
8VM1
|
pdb_00008vm1
Structural Elucidation of the Mesothelin Mucin16 CA125 Interaction
External Resource: Annotation
Domain Annotation: SCOP2 Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations
Domain Annotation: SCOP2 Classification
SCOP2 Database Homepage
Chains
Type
Family Name
Domain Identifier
Family Identifier
Provenance Source (Version)
A
SCOP2B Superfamily
Mesothelin-like
8104137
3002829
SCOP2B (2022-06-29)
Protein Family Annotation
Pfam Database Homepage
Chains
Accession
Name
Description
Comments
Source
A
PF01390
SEA domain (SEA)
SEA domain
Domain found in Sea urchin sperm protein, Enterokinase, Agrin (SEA). Proposed function of regulating or binding carbohydrate side chains. Recently a proteolytic activity has been shown for a SEA domain [4].
Domain
Gene Ontology: Gene Product Annotation
Gene Ontology Database Homepage
Chains
Polymer
Molecular Function
Biological Process
Cellular Component
A
Mesothelin, cleaved form,Mucin-16
-
cell adhesion
cell-matrix adhesion
cell-substrate adhesion
cellular process
cell surface
cellular anatomical structure
membrane
side of membrane
cell periphery
plasma membrane
membrane-bounded organelle
intracellular organelle
intracellular anatomical structure
Golgi apparatus
organelle
cytoplasm
intracellular membrane-bounded organelle
endomembrane system
cell surface
cellular anatomical structure
membrane
side of membrane
cell periphery
plasma membrane
membrane-bounded organelle
intracellular organelle
intracellular anatomical structure
Golgi apparatus
organelle
cytoplasm
intracellular membrane-bounded organelle
endomembrane system
membrane-enclosed lumen
intracellular organelle lumen
endoplasmic reticulum lumen
organelle lumen
endoplasmic reticulum
extracellular region
Golgi lumen
external side of plasma membrane
vesicle
extracellular exosome
extracellular vesicle
extracellular organelle
extracellular space
extracellular membrane-bounded organelle
Less
InterPro: Protein Family Classification
InterPro Database Homepage
Chains
Accession
Name
Type
A
IPR026664
Stereocilin-related
Family
A
IPR010335
Mesothelin
Family
A
IPR036364
SEA domain superfamily
Homologous Superfamily
A
IPR028850
Mucin-16
Family
A
IPR000082
SEA domain
Domain
Pharos: Disease Associations
Pharos Homepage Annotation
Chains
Drug Target  
Associated Disease
A
Pharos
: 
Q8WXI7
pleural disease
cholangiocarcinoma
malignant mesothelioma
pancreatic ductal adenocarcinoma
cancer
Lymphatic Metastasis
mesothelial neoplasm
adenocarcinoma
intrahepatic cholangiocarcinoma
granular cell carcinoma
malignant pancreatic neoplasm
ovarian cancer
tubular adenocarcinoma
hereditary diffuse gastric adenocarcinoma
ovarian disease
pleural disease
cholangiocarcinoma
malignant mesothelioma
pancreatic ductal adenocarcinoma
cancer
Lymphatic Metastasis
mesothelial neoplasm
adenocarcinoma
intrahepatic cholangiocarcinoma
granular cell carcinoma
malignant pancreatic neoplasm
ovarian cancer
tubular adenocarcinoma
hereditary diffuse gastric adenocarcinoma
ovarian disease
attention deficit hyperactivity disorder, inattentive type
pancreatic intraductal papillary-mucinous neoplasm
bile duct cancer
cystic fibrosis
esophageal adenocarcinoma
gastric neoplasm
mesothelioma
non-small cell lung carcinoma
ovarian neoplasm
benign mesothelioma
pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia
bone disease
psoriasis
cribriform carcinoma
endometrial carcinoma
lung carcinoma
nasopharyngeal carcinoma
benign neoplasm
pancreatic neoplasm
cribriform carcinoma of breast
endometrioid adenocarcinoma
gastric cancer
ovarian cancer
proteinuria
cystic fibrosis
malignant pancreatic neoplasm
ovarian disease
psoriasis
lung adenocarcinoma
nasopharyngeal carcinoma
ovarian neoplasm
Malignant neoplasm of ovary
Less
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