8V84

60S ribosome biogenesis intermediate (Dbp10 catalytic structure - Overall map)


Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
G [auth A]PF04427Brix domain (Brix)Brix domain- Domain
G [auth A]PF00687Ribosomal protein L1p/L10e family (Ribosomal_L1)Ribosomal protein L1p/L10e familyThis family includes prokaryotic L1 and eukaryotic L10.Domain
H [auth B]PF17835NOG1 N-terminal helical domain (NOG1_N)NOG1 N-terminal helical domainThis domain is found at the N-terminus of NOG1 GTPase proteins.Domain
H [auth B]PF06858Nucleolar GTP-binding protein 1 (NOG1) (NOG1)Nucleolar GTP-binding protein 1 (NOG1)- Family
I [auth C]PF1437460S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)60S ribosomal protein L4 C-terminal domainThis family is found at the very C-terminal of 60 ribosomal L4 proteins.Domain
I [auth C]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
J [auth D]PF00270DEAD/DEAH box helicase (DEAD)DEAD/DEAH box helicaseMembers of this family include the DEAD and DEAH box helicases. Helicases are involved in unwinding nucleic acids. The DEAD box helicases are involved in various aspects of RNA metabolism, including nuclear transcription, pre mRNA splicing, ribosome ...Members of this family include the DEAD and DEAH box helicases. Helicases are involved in unwinding nucleic acids. The DEAD box helicases are involved in various aspects of RNA metabolism, including nuclear transcription, pre mRNA splicing, ribosome biogenesis, nucleocytoplasmic transport, translation, RNA decay and organellar gene expression.
Domain
J [auth D]PF13959Domain of unknown function (DUF4217) (DUF4217)Domain of unknown function (DUF4217)This short domain is found at the C-terminus of many helicase proteins.Domain
J [auth D]PF00271Helicase conserved C-terminal domain (Helicase_C)Helicase conserved C-terminal domainThe Prosite family is restricted to DEAD/H helicases, whereas this domain family is found in a wide variety of helicases and helicase related proteins. It may be that this is not an autonomously folding unit, but an integral part of the helicase.Domain
K [auth E]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
K [auth E]PF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family
L [auth F]PF08079Ribosomal L30 N-terminal domain (Ribosomal_L30_N)Ribosomal L30 N-terminal domainThis presumed domain is found at the N-terminus of Ribosomal L30 proteins and has been termed RL30NT or NUC018 [1].Domain
L [auth F]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
L [auth F]PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35Ae- Domain
N [auth H]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
N [auth H]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
Q [auth K]PF00687Ribosomal protein L1p/L10e family (Ribosomal_L1)Ribosomal protein L1p/L10e familyThis family includes prokaryotic L1 and eukaryotic L10.Domain
S [auth M]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
S [auth M]PF00467KOW motif (KOW)KOW motif- Family
T [auth N]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
U [auth O]PF00076RNA recognition motif (RRM_1)RNA recognition motifThe RRM motif (a.k.a. RRM, RBD, or RNP domain) is probably diagnostic of an RNA binding protein. RRMs are found in a variety of RNA binding proteins, including various hnRNP proteins, proteins implicated in regulation of alternative splicing, and pro ...The RRM motif (a.k.a. RRM, RBD, or RNP domain) is probably diagnostic of an RNA binding protein. RRMs are found in a variety of RNA binding proteins, including various hnRNP proteins, proteins implicated in regulation of alternative splicing, and protein components of snRNPs. The motif also appears in a few single stranded DNA binding proteins. The RRM structure consists of four strands and two helices arranged in an alpha/beta sandwich, with a third helix present during RNA binding in some cases The C-terminal beta strand (4th strand) and final helix are hard to align and have been omitted in the SEED alignment The LA proteins (Swiss:P05455) have an N terminal rrm which is included in the seed. There is a second region towards the C terminus that has some features characteristic of a rrm but does not appear to have the important structural core of a rrm. The LA proteins (Swiss:P05455) are one of the main autoantigens in Systemic lupus erythematosus (SLE), an autoimmune disease.
Domain
U [auth O]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
V [auth P]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
Y [auth S]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A.Domain
Z [auth T]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
AA [auth V]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
AA [auth V]PF09420Ribosome biogenesis protein Nop16 (Nop16)Ribosome biogenesis protein Nop16- Family
CA [auth Y]PF01912eIF-6 family (eIF-6)eIF-6 family- Family
CA [auth Y]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
CA [auth Y]PF00467KOW motif (KOW)KOW motif- Family
DA [auth Z]PF04427Brix domain (Brix)Brix domain- Domain
M [auth G]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
R [auth L]PF03657UPF0113 PUA domain (UPF0113)UPF0113 PUA domain- Domain
R [auth L]PF17833UPF0113 Pre-PUA domain (UPF0113_N)UPF0113 Pre-PUA domain- Domain
W [auth Q]PF17135Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)Ribosomal protein 60S L18 and 50S L18e- Family
X [auth R]PF01778Ribosomal L28e protein family (Ribosomal_L28e)Ribosomal L28e protein family- Family
X [auth R]PF04874Mak16 protein C-terminal region (Mak16)Mak16 protein C-terminal region- Family
X [auth R]PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family
BA [auth W]PF17777Insertion domain in 60S ribosomal protein L10P (RL10P_insert)Insertion domain in 60S ribosomal protein L10PThis domain is found in prokaryotic and archaeal ribosomal L10 protein [1].Domain
BA [auth W]PF00466Ribosomal protein L10 (Ribosomal_L10)Ribosomal protein L10- Family
BA [auth W]PF05997Nucleolar protein,Nop52 (Nop52)Nucleolar protein,Nop52- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 1]Saccharomyces cerevisiae 25S ribosomal RNA---
B [auth 2]Saccharomyces cerevisiae 5.8S ribosomal RNA---
C [auth 3]ATP-dependent RNA helicase DBP10
D [auth 6]ITS2 RNA---
E [auth 7]60S ribosomal subunit assembly/export protein LOC1
F [auth 8]Ribosomal RNA-processing protein 14
G [auth A]Ribosome biogenesis protein BRX1
H [auth B]Large ribosomal subunit protein uL3
I [auth C]60S ribosomal protein L4-A
J [auth D]ATP-dependent RNA helicase HAS1
K [auth E]60S ribosomal protein L6-A
L [auth F]60S ribosomal protein L7-A
N [auth H]Large ribosomal subunit protein uL6A
O [auth I]Ribosome biogenesis protein NSA1-
Q [auth K]Proteasome-interacting protein CIC1
S [auth M]60S ribosomal protein L14-A
T [auth N]Large ribosomal subunit protein eL15A
U [auth O]Large ribosomal subunit protein uL13A
V [auth P]60S ribosomal protein L17-A
Y [auth S]Large ribosomal subunit protein eL20A
Z [auth T]Ribosomal RNA-processing protein 15-
AA [auth V]60S ribosomal protein L23-A
CA [auth Y]60S ribosomal protein L26-A
DA [auth Z]Ribosome biogenesis protein SSF1
EA [auth a]Large ribosomal subunit protein uL1A
GA [auth e]60S ribosomal protein L32
HA [auth f]60S ribosomal protein L33-A
IA [auth h]60S ribosomal protein L35-A
KA [auth j]60S ribosomal protein L37-A
LA [auth l]60S ribosome subunit biogenesis protein NIP7
NA [auth n]Pescadillo homolog
OA [auth o]Ribosome biogenesis protein 15
QA [auth r]Ribosome biogenesis protein NSA2-
RA [auth t]Ribosome biogenesis protein RLP7
SA [auth u]Ribosome biogenesis protein RLP24
TA [auth v]Nucleolar protein 16-
UA [auth w]Ribosomal RNA-processing protein 1-
VA [auth x]Ribosome production factor 1
WA [auth y]Eukaryotic translation initiation factor 6
M [auth G]Large ribosomal subunit protein eL8A
P [auth J]rRNA-processing protein EBP2
R [auth L]60S ribosomal protein L13-A
W [auth Q]60S ribosomal protein L18-A
X [auth R]Protein MAK16-
BA [auth W]Ribosome assembly factor MRT4
FA [auth b]Nucleolar GTP-binding protein 1
JA [auth i]60S ribosomal protein L36-A
MA [auth m]Ribosome biogenesis protein ERB1
PA [auth q]25S rRNA (cytosine(2870)-C(5))-methyltransferase

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
C [auth 3]IPR001650Helicase, C-terminal domain-likeDomain
C [auth 3]IPR000629ATP-dependent RNA helicase DEAD-box, conserved siteConserved Site
C [auth 3]IPR014001Helicase superfamily 1/2, ATP-binding domainDomain
C [auth 3]IPR012541DBP10, C-terminalDomain
C [auth 3]IPR033517DDX54/DBP10 family, DEAD-box helicase domainDomain
C [auth 3]IPR014014RNA helicase, DEAD-box type, Q motifDomain
C [auth 3]IPR011545DEAD/DEAH box helicase domainDomain
C [auth 3]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
E [auth 7]IPR03765060S ribosomal subunit assembly/export protein Loc1Family
F [auth 8]IPR029190Ribosomal RNA-processing protein 14/surfeit locus protein 6, C-terminal domainDomain
F [auth 8]IPR029188Ribosomal RNA-processing protein 14, N-terminalDomain
F [auth 8]IPR007019Surfeit locus 6Family
G [auth A]IPR026532Ribosome biogenesis protein BRX1Family
G [auth A]IPR007109Brix domainDomain
H [auth B]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
H [auth B]IPR045077Large ribosomal subunit protein uL3, archaeal/eukaryotic-typeFamily
H [auth B]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
H [auth B]IPR000597Large ribosomal subunit protein uL3Family
H [auth B]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
I [auth C]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
I [auth C]IPR002136Large ribosomal subunit protein uL4Family
I [auth C]IPR013000Large ribosomal subunit protein uL4, eukaryotic/archaeal, conserved siteConserved Site
I [auth C]IPR045240Large ribosomal subunit protein uL4, eukaryotic and archaeal typeFamily
I [auth C]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
J [auth D]IPR000629ATP-dependent RNA helicase DEAD-box, conserved siteConserved Site
J [auth D]IPR014014RNA helicase, DEAD-box type, Q motifDomain
J [auth D]IPR025313ATP-dependent rRNA helicase SPB4-like, C-terminal extensionDomain
J [auth D]IPR011545DEAD/DEAH box helicase domainDomain
J [auth D]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
J [auth D]IPR001650Helicase, C-terminal domain-likeDomain
J [auth D]IPR014001Helicase superfamily 1/2, ATP-binding domainDomain
J [auth D]IPR044773DDX18/Has1, DEAD-box helicase domainDomain
K [auth E]IPR049633Large ribosomal subunit protein eL6, conserved siteConserved Site
K [auth E]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
K [auth E]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
K [auth E]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
K [auth E]IPR000915Large ribosomal subunit protein eL6Family
L [auth F]IPR035808Large ribosomal subunit protein uL30, eukaryotic/archaealDomain
L [auth F]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
L [auth F]IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotesDomain
L [auth F]IPR039699Large ribosomal subunit protein uL30Family
L [auth F]IPR005998Large ribosomal subunit protein uL30, eukaryoticFamily
L [auth F]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
L [auth F]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
N [auth H]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
N [auth H]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
N [auth H]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
N [auth H]IPR000702Large ribosomal subunit protein uL6-likeFamily
O [auth I]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
O [auth I]IPR037379WDR74/Nsa1Family
Q [auth K]IPR023674Ribosomal protein uL1-likeHomologous Superfamily
Q [auth K]IPR028364Ribosomal protein uL1/ribosomal biogenesis proteinFamily
S [auth M]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
S [auth M]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
S [auth M]IPR039660Large ribosomal subunit protein eL14Family
S [auth M]IPR041985Large ribosomal subunit protein eL14, KOW motifDomain
S [auth M]IPR002784Large ribosomal subunit protein eL14 domainDomain
S [auth M]IPR005824KOWDomain
T [auth N]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
T [auth N]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
T [auth N]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
T [auth N]IPR000439Large ribosomal subunit protein eL15Family
U [auth O]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
U [auth O]IPR005822Large ribosomal subunit protein uL13Family
U [auth O]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
U [auth O]IPR005755Large ribosomal subunit protein uL13, eukaryotic/archaealFamily
V [auth P]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
V [auth P]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
V [auth P]IPR001063Large ribosomal subunit protein uL22Family
V [auth P]IPR005721Large ribosomal subunit protein uL22, eukaryotic/archaealFamily
Y [auth S]IPR028877Large ribosomal subunit protein eL20Family
Y [auth S]IPR023573Large ribosomal subunit protein eL20 domainDomain
Y [auth S]IPR021138Large ribosomal subunit protein eL20, eukaryotesFamily
Z [auth T]IPR012459Ribosomal RNA-processing protein 15Family
AA [auth V]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
AA [auth V]IPR000218Large ribosomal subunit protein uL14Family
AA [auth V]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
CA [auth Y]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
CA [auth Y]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
CA [auth Y]IPR005824KOWDomain
CA [auth Y]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
CA [auth Y]IPR005756Large ribosomal subunit protein uL24, eukaryotic/archaealFamily
CA [auth Y]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
DA [auth Z]IPR007109Brix domainDomain
DA [auth Z]IPR045112Protein Peter Pan-likeFamily
EA [auth a]IPR023673Large ribosomal subunit protein uL1, conserved siteConserved Site
EA [auth a]IPR016095Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainHomologous Superfamily
EA [auth a]IPR023674Ribosomal protein uL1-likeHomologous Superfamily
EA [auth a]IPR002143Large ribosomal subunit protein uL1Family
EA [auth a]IPR028364Ribosomal protein uL1/ribosomal biogenesis proteinFamily
GA [auth e]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
GA [auth e]IPR001515Large ribosomal subunit protein eL32Family
GA [auth e]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
HA [auth f]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
HA [auth f]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
HA [auth f]IPR001780Large ribosomal subunit protein eL33Family
HA [auth f]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
IA [auth h]IPR045059Large ribosomal subunit protein uL29, eukaryotesFamily
IA [auth h]IPR001854Large ribosomal subunit protein uL29Family
IA [auth h]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
IA [auth h]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
KA [auth j]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
KA [auth j]IPR001569Large ribosomal subunit protein eL37Family
KA [auth j]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
KA [auth j]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
LA [auth l]IPR015947PUA-like superfamilyHomologous Superfamily
LA [auth l]IPR005155UPF0113, PUA domainDomain
LA [auth l]IPR016686Ribosome biogenesis factor, NIP7Family
LA [auth l]IPR036974PUA domain superfamilyHomologous Superfamily
LA [auth l]IPR04059860S ribosome subunit biogenesis protein NIP7, pre-PUA domainDomain
LA [auth l]IPR002478PUA domainDomain
NA [auth n]IPR010613PescadilloFamily
NA [auth n]IPR001357BRCT domainDomain
NA [auth n]IPR036420BRCT domain superfamilyHomologous Superfamily
OA [auth o]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
OA [auth o]IPR000504RNA recognition motif domainDomain
OA [auth o]IPR034469Ribosome biogenesis protein 15, RNA recognition motifDomain
OA [auth o]IPR035979RNA-binding domain superfamilyHomologous Superfamily
QA [auth r]IPR039411Ribosomal biogenesis NSA2 familyFamily
QA [auth r]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
RA [auth t]IPR035808Large ribosomal subunit protein uL30, eukaryotic/archaealDomain
RA [auth t]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
RA [auth t]IPR039699Large ribosomal subunit protein uL30Family
RA [auth t]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
RA [auth t]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
SA [auth u]IPR011017TRASH domainDomain
SA [auth u]IPR000988Large ribosomal subunit protein eL24-relatedFamily
SA [auth u]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
TA [auth v]IPR019002Ribosome biogenesis protein Nop16Family
UA [auth w]IPR010301Ribosomal RNA processing protein 1Family
VA [auth x]IPR044281U3 snoRNP protein/Ribosome production factor 1Family
VA [auth x]IPR007109Brix domainDomain
WA [auth y]IPR002769Translation initiation factor IF6Family
M [auth G]IPR001921Large ribosomal subunit protein eL8Family
M [auth G]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
M [auth G]IPR004037Large ribosomal subunit protein eL8-like, conserved siteConserved Site
M [auth G]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
M [auth G]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
P [auth J]IPR008610Eukaryotic rRNA processingFamily
R [auth L]IPR001380Large ribosomal subunit protein eL13Family
R [auth L]IPR018256Large ribosomal subunit protein eL13, conserved siteConserved Site
W [auth Q]IPR021131Large ribosomal subunit protein uL15/eL18Domain
W [auth Q]IPR021132Large ribosomal subunit protein eL18, conserved siteConserved Site
W [auth Q]IPR000039Large ribosomal subunit protein eL18Family
W [auth Q]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
X [auth R]IPR006958Mak16 proteinFamily
X [auth R]IPR029004Ribosomal eL28/Mak16Domain
BA [auth W]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
BA [auth W]IPR001790Large ribosomal subunit protein uL10Family
BA [auth W]IPR043164Large ribosomal subunit protein uL10-like, insertion domain superfamilyHomologous Superfamily
BA [auth W]IPR040637Large ribosomal subunit protein uL10-like, insertion domainDomain
BA [auth W]IPR033867Ribosome assembly factor Mrt4Family
FA [auth b]IPR024926Nucleolar GTP-binding protein 1Family
FA [auth b]IPR031167OBG-type guanine nucleotide-binding (G) domainDomain
FA [auth b]IPR012973NOG, C-terminalDomain
FA [auth b]IPR010674Nucleolar GTP-binding protein 1, Rossman-fold domainDomain
FA [auth b]IPR041623NOG1, N-terminal helical domainDomain
FA [auth b]IPR006073GTP binding domainDomain
FA [auth b]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
JA [auth i]IPR000509Large ribosomal subunit protein eL36Family
JA [auth i]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
MA [auth m]IPR019775WD40 repeat, conserved siteConserved Site
MA [auth m]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
MA [auth m]IPR028598WD repeat BOP1/Erb1Family
MA [auth m]IPR001680WD40 repeatRepeat
MA [auth m]IPR012953BOP1, N-terminal domainDomain
MA [auth m]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
PA [auth q]IPR001678SAM-dependent methyltransferase RsmB-F/NOP2-type domainDomain
PA [auth q]IPR029063S-adenosyl-L-methionine-dependent methyltransferase superfamilyHomologous Superfamily
PA [auth q]IPR023267RNA (C5-cytosine) methyltransferaseFamily
PA [auth q]IPR011023Nop2pDomain
PA [auth q]IPR018314Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved siteConserved Site
PA [auth q]IPR031341Ribosomal RNA small subunit methyltransferase F, N-terminalDomain
PA [auth q]IPR023273RNA (C5-cytosine) methyltransferase, NOP2Family
PA [auth q]IPR049560SAM-dependent methyltransferase RsmB-F/NOP2-type, catalytic coreDomain