8V5L | pdb_00008v5l

Structure of the Varicella Zoster Virus (VZV) gI binding domain of glycoprotein E (gE) in complex with human Fab 1A2 and 1E12

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth H]HATPase_ce8v5lH01 A: alpha bundlesX: Helical bundle insertion in helicase domainsH: Helical bundle in Hef helicaseT: Helical bundle in Hef helicaseF: HATPase_cECOD (develop294)
B [auth L]HATPase_ce8v5lL02 A: alpha bundlesX: Helical bundle insertion in helicase domainsH: Helical bundle in Hef helicaseT: Helical bundle in Hef helicaseF: HATPase_cECOD (develop294)
E [auth C]HATPase_ce8v5lC01 A: alpha bundlesX: Helical bundle insertion in helicase domainsH: Helical bundle in Hef helicaseT: Helical bundle in Hef helicaseF: HATPase_cECOD (develop294)
D [auth B]HATPase_ce8v5lB01 A: alpha bundlesX: Helical bundle insertion in helicase domainsH: Helical bundle in Hef helicaseT: Helical bundle in Hef helicaseF: HATPase_cECOD (develop294)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
A [auth H]Heavy ChainIGHV1 -envelope glycoprotein eSAbDab (2026-03-20)
B [auth L]Light ChainIGKV1 Kappaenvelope glycoprotein eSAbDab (2026-03-20)
E [auth C]Light ChainIGLV1 Lambdaenvelope glycoprotein eSAbDab (2026-03-20)
D [auth B]Heavy ChainIGHV4 -envelope glycoprotein eSAbDab (2026-03-20)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth H]Fab 1A2 Heavy Chain---
B [auth L]Fab 1A2 Light Chain---
C [auth A]Envelope glycoprotein E- -
E [auth C]Fab 1E12 Light Chain---
D [auth B]Fab 1E12 Heavy Chain---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
C [auth A]IPR013783Immunoglobulin-like foldHomologous Superfamily
C [auth A]IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
C [auth A]IPR046463Envelope glycoprotein E, N-terminalDomain
C [auth A]IPR003404Envelope glycoprotein E, Fc-binding domainDomain