8UHE

Structure of the far-red light-absorbing allophycocyanin core expressed during FaRLiP

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Protein Modification Annotation

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, E, G, M, O A, E, G, M, O, Q	PF00502	Phycobilisome protein (Phycobilisome)	Phycobilisome protein	-	Domain
B, D, F, H, L B, D, F, H, L, N, P, R	PF00502	Phycobilisome protein (Phycobilisome)	Phycobilisome protein	-	Domain
C	PF00502	Phycobilisome protein (Phycobilisome)	Phycobilisome protein	-	Domain
I	PF00502	Phycobilisome protein (Phycobilisome)	Phycobilisome protein	-	Domain
J	PF00502	Phycobilisome protein (Phycobilisome)	Phycobilisome protein	-	Domain
K	PF00502	Phycobilisome protein (Phycobilisome)	Phycobilisome protein	-	Domain
K	PF00427	Phycobilisome Linker polypeptide (PBS_linker_poly)	Phycobilisome Linker polypeptide	-	Family
S	PF01383	CpcD/allophycocyanin linker domain (CpcD)	CpcD/allophycocyanin linker domain	-	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, E, G, M, O A, E, G, M, O, Q	ApcD5	-	photosynthesis cellular metabolic process metabolic process cellular process	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane plasma membrane-derived chromatophore cellular anatomical entity thylakoid membrane intracellular organelle cell periphery plasma membrane-derived thylakoid membrane organelle intracellular non-membrane-bounded organelle plasma membrane region bacterial thylakoid intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane plasma membrane-derived chromatophore cellular anatomical entity thylakoid membrane intracellular organelle cell periphery plasma membrane-derived thylakoid membrane organelle intracellular non-membrane-bounded organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid non-membrane-bounded organelle protein-containing complex membrane protein complex light-harvesting complex phycobilisome
B, D, F, H, L B, D, F, H, L, N, P, R	ApcB2	-	photosynthesis cellular metabolic process metabolic process cellular process	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane plasma membrane-derived chromatophore cellular anatomical entity thylakoid membrane intracellular organelle cell periphery plasma membrane-derived thylakoid membrane organelle intracellular non-membrane-bounded organelle plasma membrane region bacterial thylakoid intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane plasma membrane-derived chromatophore cellular anatomical entity thylakoid membrane intracellular organelle cell periphery plasma membrane-derived thylakoid membrane organelle intracellular non-membrane-bounded organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid non-membrane-bounded organelle protein-containing complex membrane protein complex light-harvesting complex phycobilisome
C	ApcD3	-	photosynthesis cellular metabolic process metabolic process cellular process	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane plasma membrane-derived chromatophore cellular anatomical entity thylakoid membrane intracellular organelle cell periphery plasma membrane-derived thylakoid membrane organelle intracellular non-membrane-bounded organelle plasma membrane region bacterial thylakoid intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane plasma membrane-derived chromatophore cellular anatomical entity thylakoid membrane intracellular organelle cell periphery plasma membrane-derived thylakoid membrane organelle intracellular non-membrane-bounded organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid non-membrane-bounded organelle protein-containing complex membrane protein complex light-harvesting complex phycobilisome
I	ApcD2	-	photosynthesis cellular metabolic process metabolic process cellular process	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane plasma membrane-derived chromatophore cellular anatomical entity thylakoid membrane intracellular organelle cell periphery plasma membrane-derived thylakoid membrane organelle intracellular non-membrane-bounded organelle plasma membrane region bacterial thylakoid intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane plasma membrane-derived chromatophore cellular anatomical entity thylakoid membrane intracellular organelle cell periphery plasma membrane-derived thylakoid membrane organelle intracellular non-membrane-bounded organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid non-membrane-bounded organelle protein-containing complex membrane protein complex light-harvesting complex phycobilisome
J	ApcF	-	photosynthesis cellular metabolic process metabolic process cellular process	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane plasma membrane-derived chromatophore cellular anatomical entity thylakoid membrane intracellular organelle cell periphery plasma membrane-derived thylakoid membrane organelle intracellular non-membrane-bounded organelle plasma membrane region bacterial thylakoid intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane plasma membrane-derived chromatophore cellular anatomical entity thylakoid membrane intracellular organelle cell periphery plasma membrane-derived thylakoid membrane organelle intracellular non-membrane-bounded organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid non-membrane-bounded organelle protein-containing complex membrane protein complex light-harvesting complex phycobilisome
K	ApcE2	lyase activity catalytic activity	photosynthesis cellular metabolic process metabolic process cellular process	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane plasma membrane-derived chromatophore cellular anatomical entity thylakoid membrane intracellular organelle cell periphery plasma membrane-derived thylakoid membrane organelle intracellular non-membrane-bounded organelle plasma membrane region bacterial thylakoid intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane plasma membrane-derived chromatophore cellular anatomical entity thylakoid membrane intracellular organelle cell periphery plasma membrane-derived thylakoid membrane organelle intracellular non-membrane-bounded organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid non-membrane-bounded organelle protein-containing complex membrane protein complex light-harvesting complex phycobilisome
S	ApcC	-	photosynthesis cellular metabolic process metabolic process cellular process	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane plasma membrane-derived chromatophore cellular anatomical entity thylakoid membrane intracellular organelle cell periphery plasma membrane-derived thylakoid membrane organelle intracellular non-membrane-bounded organelle plasma membrane region bacterial thylakoid intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane plasma membrane-derived chromatophore cellular anatomical entity thylakoid membrane intracellular organelle cell periphery plasma membrane-derived thylakoid membrane organelle intracellular non-membrane-bounded organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid non-membrane-bounded organelle protein-containing complex membrane protein complex light-harvesting complex phycobilisome

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, E, G, M, O A, E, G, M, O, Q	IPR038719	Phycobilisome, alpha/beta subunit superfamily	Homologous Superfamily
A, E, G, M, O A, E, G, M, O, Q	IPR009050	Globin-like superfamily	Homologous Superfamily
A, E, G, M, O A, E, G, M, O, Q	IPR012128	Phycobilisome, alpha/beta subunit	Family
B, D, F, H, L B, D, F, H, L, N, P, R	IPR038719	Phycobilisome, alpha/beta subunit superfamily	Homologous Superfamily
B, D, F, H, L B, D, F, H, L, N, P, R	IPR006245	Allophycocyanin, beta subunit	Family
B, D, F, H, L B, D, F, H, L, N, P, R	IPR009050	Globin-like superfamily	Homologous Superfamily
B, D, F, H, L B, D, F, H, L, N, P, R	IPR012128	Phycobilisome, alpha/beta subunit	Family
C	IPR038719	Phycobilisome, alpha/beta subunit superfamily	Homologous Superfamily
C	IPR009050	Globin-like superfamily	Homologous Superfamily
C	IPR012128	Phycobilisome, alpha/beta subunit	Family
I	IPR038719	Phycobilisome, alpha/beta subunit superfamily	Homologous Superfamily
I	IPR009050	Globin-like superfamily	Homologous Superfamily
I	IPR012128	Phycobilisome, alpha/beta subunit	Family
J	IPR038719	Phycobilisome, alpha/beta subunit superfamily	Homologous Superfamily
J	IPR006245	Allophycocyanin, beta subunit	Family
J	IPR009050	Globin-like superfamily	Homologous Superfamily
J	IPR012128	Phycobilisome, alpha/beta subunit	Family
K	IPR038719	Phycobilisome, alpha/beta subunit superfamily	Homologous Superfamily
K	IPR001297	Phycobilisome linker domain	Domain
K	IPR009050	Globin-like superfamily	Homologous Superfamily
K	IPR038255	Phycobilisome linker domain superfamily	Homologous Superfamily
K	IPR012128	Phycobilisome, alpha/beta subunit	Family
S	IPR011064	Allophycocyanin linker chain	Homologous Superfamily
S	IPR011134	Allophycocyanin linker protein	Family
S	IPR008213	CpcD-like domain	Domain

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
B, D, F, H, L B, D, F, H, L, N, P, R	MEN	Parent Component: ASN RESID: AA0070 PSI-MOD : N4-methyl-L-asparagine MOD:00079
J	MEN	Parent Component: ASN RESID: AA0070 , AA0070 PSI-MOD : N4-methyl-L-asparagine MOD:00079 , N4-methyl-L-asparagine MOD:00079

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.

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8UHE

Structure of the far-red light-absorbing allophycocyanin core expressed during FaRLiP

External Resource: Annotation

Protein Family Annotation Pfam Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage

Protein Modification Annotation