8UH4 | pdb_00008uh4

Cryo-EM structure of Maize Streak Virus (MSV) - single head Geminivirus

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	Serpin	e8uh4B1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
BA [auth b]	Serpin	e8uh4b1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
C	Serpin	e8uh4C1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
CA [auth c]	Serpin	e8uh4c1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
CB [auth 3]	Serpin	e8uh431	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
DB [auth 4]	Serpin	e8uh441	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
EA [auth e]	Serpin	e8uh4e1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
EB [auth 5]	Serpin	e8uh451	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
FB [auth 6]	Serpin	e8uh461	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
GA [auth g]	Serpin	e8uh4g1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
GB [auth 7]	Serpin	e8uh471	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
H	Serpin	e8uh4H1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
IA [auth i]	Serpin	e8uh4i1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
K	Serpin	e8uh4K1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
L	Serpin	e8uh4L1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
LA [auth l]	Serpin	e8uh4l1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
M	Serpin	e8uh4M1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
N	Serpin	e8uh4N1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
NA [auth n]	Serpin	e8uh4n1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
P	Serpin	e8uh4P1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
Q	Serpin	e8uh4Q1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
R	Serpin	e8uh4R1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
RA [auth r]	Serpin	e8uh4r1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
SA [auth s]	Serpin	e8uh4s1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
UA [auth u]	Serpin	e8uh4u1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
V	Serpin	e8uh4V1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
W	Serpin	e8uh4W1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
WA [auth w]	Serpin	e8uh4w1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
Y	Serpin	e8uh4Y1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
Z	Serpin	e8uh4Z1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
ZA [auth z]	Serpin	e8uh4z1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
YA [auth y]	Serpin	e8uh4y1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
XA [auth x]	Serpin	e8uh4x1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
X	Serpin	e8uh4X1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
VA [auth v]	Serpin	e8uh4v1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
U	Serpin	e8uh4U1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
TA [auth t]	Serpin	e8uh4t1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
T	Serpin	e8uh4T1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
S	Serpin	e8uh4S1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
QA [auth q]	Serpin	e8uh4q1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
PA [auth p]	Serpin	e8uh4p1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
OA [auth o]	Serpin	e8uh4o1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
O	Serpin	e8uh4O1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
MA [auth m]	Serpin	e8uh4m1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
KA [auth k]	Serpin	e8uh4k1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
JA [auth j]	Serpin	e8uh4j1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
J	Serpin	e8uh4J1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
I	Serpin	e8uh4I1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
HB [auth 8]	Serpin	e8uh481	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
HA [auth h]	Serpin	e8uh4h1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
G	Serpin	e8uh4G1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
FA [auth f]	Serpin	e8uh4f1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
F	Serpin	e8uh4F1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
E	Serpin	e8uh4E1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
DA [auth d]	Serpin	e8uh4d1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
D	Serpin	e8uh4D1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
BB [auth 2]	Serpin	e8uh421	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
AB [auth 1]	Serpin	e8uh411	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
AA [auth a]	Serpin	e8uh4a1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)
A	Serpin	e8uh4A1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Serpin	ECOD (v295)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, AA [auth a], AB [auth 1], B, BA [auth b], A, AA [auth a], AB [auth 1], B, BA [auth b], BB [auth 2], C, CA [auth c], CB [auth 3], D, DA [auth d], DB [auth 4], E, EA [auth e], EB [auth 5], F, FA [auth f], FB [auth 6], G, GA [auth g], GB [auth 7], H, HA [auth h], HB [auth 8], I, IA [auth i], J, JA [auth j], K, KA [auth k], L, LA [auth l], M, MA [auth m], N, NA [auth n], O, OA [auth o], P, PA [auth p], Q, QA [auth q], R, RA [auth r], S, SA [auth s], T, TA [auth t], U, UA [auth u], V, VA [auth v], W, WA [auth w], X, XA [auth x], Y, YA [auth y], Z, ZA [auth z]	Capsid protein	DNA binding binding nucleic acid binding structural molecule activity	biological process involved in interspecies interaction between organisms viral penetration into host nucleus intracellular transport of virus viral process viral life cycle transport of virus biological process involved in symbiotic interaction symbiont entry into host cell symbiont entry into host biological process involved in interaction with host	host cellular component cellular anatomical structure host cell other organism part viral capsid icosahedral viral capsid virion component T=1 icosahedral viral capsid host intracellular membrane-bounded organelle host intracellular part host cell part host intracellular region host cell nucleus host intracellular organelle
AC [auth AS], AD [auth As], BC [auth AT], BD [auth At], CC [auth AU], AC [auth AS], AD [auth As], BC [auth AT], BD [auth At], CC [auth AU], CD [auth Au], DC [auth AV], DD [auth Av], EC [auth AW], ED [auth Aw], FC [auth AX], FD [auth Ax], GC [auth AY], GD [auth Ay], HC [auth AZ], HD [auth Az], IB [auth AA], IC [auth Aa], ID [auth A1], JB [auth AB], JC [auth Ab], JD [auth A2], KB [auth AC], KC [auth Ac], KD [auth A3], LB [auth AD], LC [auth Ad], LD [auth A4], MB [auth AE], MC [auth Ae], MD [auth A5], NB [auth AF], NC [auth Af], ND [auth A6], OB [auth AG], OC [auth Ag], OD [auth A7], PB [auth AH], PC [auth Ah], PD [auth A8], QB [auth AI], QC [auth Ai], RB [auth AJ], RC [auth Aj], SB [auth AK], SC [auth Ak], TB [auth AL], TC [auth Al], UB [auth AM], UC [auth Am], VB [auth AN], VC [auth An], WB [auth AO], WC [auth Ao], XB [auth AP], XC [auth Ap], YB [auth AQ], YC [auth Aq], ZB [auth AR], ZC [auth Ar]	genomic DNA	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, AA [auth a], AB [auth 1], B, BA [auth b], A, AA [auth a], AB [auth 1], B, BA [auth b], BB [auth 2], C, CA [auth c], CB [auth 3], D, DA [auth d], DB [auth 4], E, EA [auth e], EB [auth 5], F, FA [auth f], FB [auth 6], G, GA [auth g], GB [auth 7], H, HA [auth h], HB [auth 8], I, IA [auth i], J, JA [auth j], K, KA [auth k], L, LA [auth l], M, MA [auth m], N, NA [auth n], O, OA [auth o], P, PA [auth p], Q, QA [auth q], R, RA [auth r], S, SA [auth s], T, TA [auth t], U, UA [auth u], V, VA [auth v], W, WA [auth w], X, XA [auth x], Y, YA [auth y], Z, ZA [auth z]	IPR000263	Geminivirus AR1/BR1 coat protein	Family
A, AA [auth a], AB [auth 1], B, BA [auth b], A, AA [auth a], AB [auth 1], B, BA [auth b], BB [auth 2], C, CA [auth c], CB [auth 3], D, DA [auth d], DB [auth 4], E, EA [auth e], EB [auth 5], F, FA [auth f], FB [auth 6], G, GA [auth g], GB [auth 7], H, HA [auth h], HB [auth 8], I, IA [auth i], J, JA [auth j], K, KA [auth k], L, LA [auth l], M, MA [auth m], N, NA [auth n], O, OA [auth o], P, PA [auth p], Q, QA [auth q], R, RA [auth r], S, SA [auth s], T, TA [auth t], U, UA [auth u], V, VA [auth v], W, WA [auth w], X, XA [auth x], Y, YA [auth y], Z, ZA [auth z]	IPR029053	Viral coat protein subunit	Homologous Superfamily
A, AA [auth a], AB [auth 1], B, BA [auth b], A, AA [auth a], AB [auth 1], B, BA [auth b], BB [auth 2], C, CA [auth c], CB [auth 3], D, DA [auth d], DB [auth 4], E, EA [auth e], EB [auth 5], F, FA [auth f], FB [auth 6], G, GA [auth g], GB [auth 7], H, HA [auth h], HB [auth 8], I, IA [auth i], J, JA [auth j], K, KA [auth k], L, LA [auth l], M, MA [auth m], N, NA [auth n], O, OA [auth o], P, PA [auth p], Q, QA [auth q], R, RA [auth r], S, SA [auth s], T, TA [auth t], U, UA [auth u], V, VA [auth v], W, WA [auth w], X, XA [auth x], Y, YA [auth y], Z, ZA [auth z]	IPR000143	Geminivirus MSV 27Kd coat protein	Family

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.