8UBT | pdb_00008ubt

Structure of SCF-FBXL17-BACH1BTB E3 ligase complex


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
DSCOP2B SuperfamilyPOZ domain 8080931 3000894 SCOP2B (2022-06-29)
BSCOP2B SuperfamilySkp1 dimerisation domain-like 8038683 3000564 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyPOZ domain 8035033 3000894 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyCullin repeat-like 8003460 3000059 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00651BTB/POZ domain (BTB)BTB/POZ domainThe BTB (for BR-C, ttk and bab) [1] or POZ (for Pox virus and Zinc finger) [2] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family o ...The BTB (for BR-C, ttk and bab) [1] or POZ (for Pox virus and Zinc finger) [2] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [2]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [3]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [4,5,6]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Domain
PF13516Leucine Rich repeat (LRR_6)Leucine Rich repeat- Repeat
PF12937F-box-like (F-box-like)F-box-likeThis is an F-box-like family. Domain
PF01466Skp1 family, dimerisation domain (Skp1)Skp1 family, dimerisation domainDomain
PF03931Skp1 family, tetramerisation domain (Skp1_POZ)Skp1 family, tetramerisation domainDomain
PF00888Cullin alpha solenoid domain (Cullin)Cullin alpha solenoid domain- Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Transcription regulator protein BACH1
F-box/LRR-repeat protein 17-
S-phase kinase-associated protein 1
Cullin-1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR050457Zinc finger and BTB domain-containingFamily
IPR004827Basic-leucine zipper domainDomain
IPR000210BTB/POZ domainDomain
IPR008917Transcription factor, Skn-1-like, DNA-binding domain superfamilyHomologous Superfamily
IPR004826Basic leucine zipper domain, Maf-typeDomain
IPR043321BACH, basic leucine zipper (bZIP) domainDomain
IPR046347Basic-leucine zipper domain superfamilyHomologous Superfamily
IPR011333SKP1/BTB/POZ domain superfamilyHomologous Superfamily
IPR036047F-box-like domain superfamilyHomologous Superfamily
IPR001611Leucine-rich repeatRepeat
IPR001810F-box domainDomain
IPR050648F-box/Leucine-rich repeatFamily
IPR032675Leucine-rich repeat domain superfamilyHomologous Superfamily
IPR006553Leucine-rich repeat, cysteine-containing subtypeRepeat
IPR016073SKP1 component, POZ domainDomain
IPR001232S-phase kinase-associated protein 1-likeFamily
IPR036296SKP1-like, dimerisation domain superfamilyHomologous Superfamily
IPR016072SKP1 component, dimerisationDomain
IPR011333SKP1/BTB/POZ domain superfamilyHomologous Superfamily
IPR016897S-phase kinase-associated protein 1Family
IPR045093CullinFamily
IPR016158Cullin homology domainDomain
IPR016157Cullin, conserved siteConserved Site
IPR001373Cullin, N-terminalDomain
IPR019559Cullin, neddylation domainDomain
IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
IPR036317Cullin homology domain superfamilyHomologous Superfamily
IPR016159Cullin repeat-like-containing domain superfamilyHomologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
PharosO14867
PharosQ9UF56
PharosP63208
PharosQ13616