Annotations: 8TZ1

Cryo-EM structure of bovine concentrative nucleoside transporter 3 in complex with Ribavirin

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: PDBTM
Membrane Protein Annotation: MemProtMD

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C [auth B]	WD40	e8tz1B1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
B [auth C]	WD40	e8tz1C1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
A	DNA_pol_lambd_f	e8tz1A01	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: DNA_pol_lambd_f	ECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B [auth C], C [auth B]	PF07670	Nucleoside recognition (Gate)	Nucleoside recognition	This region in the nucleoside transporter proteins are responsible for determining nucleoside specificity in the human CNT1 and CNT2 proteins (e.g Swiss:O00337) [1]. In the FeoB proteins (e.g. Swiss:O25396), which are believed to be Fe2+ transporter ...	This region in the nucleoside transporter proteins are responsible for determining nucleoside specificity in the human CNT1 and CNT2 proteins (e.g Swiss:O00337) [1]. In the FeoB proteins (e.g. Swiss:O25396), which are believed to be Fe2+ transporters, it includes the membrane pore region, so the function of this region is likely to be more general than just nucleoside specificity [2]. This family may represent the pore and gate, with a wide potential range of specificity. Hence its name 'Gate'.	Domain
A, B [auth C], C [auth B]	PF07662	Na+ dependent nucleoside transporter C-terminus (Nucleos_tra2_C)	Na+ dependent nucleoside transporter C-terminus	-	Family
A, B [auth C], C [auth B]	PF01773	Na+ dependent nucleoside transporter N-terminus (Nucleos_tra2_N)	Na+ dependent nucleoside transporter N-terminus	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B [auth C], C [auth B]	Sodium/nucleoside cotransporter	monoatomic cation transmembrane transporter activity purine-specific nucleoside:sodium symporter activity solute:sodium symporter activity solute:monoatomic cation symporter activity sodium ion transmembrane transporter activity secondary active transmembrane transporter activity active transmembrane transporter activity monoatomic ion transmembrane transporter activity transporter activity metal ion transmembrane transporter activity transmembrane transporter activity symporter activity carbohydrate derivative transmembrane transporter activity uridine transmembrane transporter activity monoatomic cation transmembrane transporter activity purine-specific nucleoside:sodium symporter activity solute:sodium symporter activity solute:monoatomic cation symporter activity sodium ion transmembrane transporter activity secondary active transmembrane transporter activity active transmembrane transporter activity monoatomic ion transmembrane transporter activity transporter activity metal ion transmembrane transporter activity transmembrane transporter activity symporter activity carbohydrate derivative transmembrane transporter activity uridine transmembrane transporter activity pyrimidine nucleoside transmembrane transporter activity nucleoside transmembrane transporter activity nucleobase-containing compound transmembrane transporter activity nucleobase transmembrane transporter activity pyrimidine nucleobase transmembrane transporter activity nucleoside:sodium symporter activity nucleobase:monoatomic cation symporter activity pyrimidine- and adenosine-specific:sodium symporter activity purine nucleobase transmembrane transporter activity	nitrogen compound transport transport nucleoside transmembrane transport nucleoside transport carbohydrate derivative transport establishment of localization transmembrane transport localization cellular process purine nucleoside transmembrane transport nucleobase-containing compound transport purine-containing compound transmembrane transport pyrimidine nucleoside transport	brush border membrane membrane plasma membrane cluster of actin-based cell projections plasma membrane bounded cell projection brush border cell periphery cell projection cellular anatomical structure apical part of cell plasma membrane region apical plasma membrane cell projection membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B [auth C], C [auth B]	IPR018270	Concentrative nucleoside transporter, metazoan/bacterial	Family
A, B [auth C], C [auth B]	IPR008276	Concentrative nucleoside transporter	Family
A, B [auth C], C [auth B]	IPR002668	Concentrative nucleoside transporter N-terminal domain	Domain
A, B [auth C], C [auth B]	IPR011657	Concentrative nucleoside transporter C-terminal domain	Domain
A, B [auth C], C [auth B]	IPR011642	Nucleoside transporter/FeoB GTPase, Gate domain	Domain

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

Chains	External Link	Comment
A, B [auth C], C [auth B]	PDBTM	Annotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

Chains	External Link	Comment
A, B [auth C], C [auth B]	MemProtMD	Annotated as membrane protein by MemProtMD

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8TZ1 | pdb_00008tz1