8TRV | pdb_00008trv

Structure of the EphA2 LBDCRD bound to FabS1C_C1

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B Superfamilygalactose-binding domain-like 8082078 3000087 SCOP2B (2022-06-29)
F [auth B]SCOP2B Superfamilygalactose-binding domain-like 8082078 3000087 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
B [auth C]F5_F8_type_Ce8trvC01 A: a/b three-layered sandwichesX: ATP-grasp_6H: ATP-grasp_6T: ATP-grasp_6F: F5_F8_type_CECOD (v294.1)
AF5_F8_type_Ce8trvA01 A: a/b three-layered sandwichesX: ATP-grasp_6H: ATP-grasp_6T: ATP-grasp_6F: F5_F8_type_CECOD (v294.1)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
B [auth C],
D		Heavy ChainIGHV3 -ephrin type-a receptor 2SAbDab (2026-03-27)
C [auth G],
E		Light ChainIGKV1 Kappaephrin type-a receptor 2SAbDab (2026-03-27)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
F [auth B]		PF01404Ephrin receptor ligand binding domain (Ephrin_lbd)Ephrin receptor ligand binding domainThe Eph receptors, which bind to ephrins Pfam:PF00812 are a large family of receptor tyrosine kinases. This family represents the amino terminal domain which binds the ephrin ligand [1]. Domain
A,
F [auth B]		PF25599Ephrin cysteine rich domain (Ephrin_CRD)Ephrin cysteine rich domainThis entry represents the cysteine-rich domain found in ephrin proteins. Ephrins are important cell surface proteins that act as ligands for Eph receptor tyrosine kinases Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B [auth C],
D		S1C variant of Fab_C1 heavy chain---
C [auth G],
E		S1C variant of Fab_C1 light chain---
A,
F [auth B]		Ephrin type-A receptor 2

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A,
F [auth B]		IPR001426Tyrosine-protein kinase, receptor class V, conserved siteConserved Site
A,
F [auth B]		IPR008266Tyrosine-protein kinase, active siteActive Site
A,
F [auth B]		IPR001090Ephrin, ligand binding domainDomain
A,
F [auth B]		IPR020635Tyrosine-protein kinase, catalytic domainDomain
A,
F [auth B]		IPR000719Protein kinase domainDomain
A,
F [auth B]		IPR016257Ephrin receptor type-A /type-BFamily
A,
F [auth B]		IPR013783Immunoglobulin-like foldHomologous Superfamily
A,
F [auth B]		IPR027936Ephrin, transmembrane domainDomain
A,
F [auth B]		IPR001660Sterile alpha motif domainDomain
A,
F [auth B]		IPR034263Ephrin type-A receptor 2, ligand binding domainDomain
A,
F [auth B]		IPR017441Protein kinase, ATP binding siteBinding Site
A,
F [auth B]		IPR008979Galactose-binding-like domain superfamilyHomologous Superfamily
A,
F [auth B]		IPR050449Ephrin receptor tyrosine kinasesFamily
A,
F [auth B]		IPR001245Serine-threonine/tyrosine-protein kinase, catalytic domainDomain
A,
F [auth B]		IPR013761Sterile alpha motif/pointed domain superfamilyHomologous Superfamily
A,
F [auth B]		IPR003961Fibronectin type IIIDomain
A,
F [auth B]		IPR011009Protein kinase-like domain superfamilyHomologous Superfamily
A,
F [auth B]		IPR009030Growth factor receptor cysteine-rich domain superfamilyHomologous Superfamily
A,
F [auth B]		IPR036116Fibronectin type III superfamilyHomologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A,
F [auth B]		Pharos:  P29317