8TRT | pdb_00008trt

Structure of the EphA2 CRD bound to FabS1CE_C1, monoclinic form

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
C [auth B]Helicase_Ce8trtB1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Helicase_CECOD (v294.1)
AHelicase_Ce8trtA1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Helicase_CECOD (v294.1)
D [auth C]Helicase_Ce8trtC1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Helicase_CECOD (v294.1)
B [auth G]Helicase_Ce8trtG1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Helicase_CECOD (v294.1)
F [auth D]Helicase_Ce8trtD1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Helicase_CECOD (v294.1)
EHelicase_Ce8trtE1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Helicase_CECOD (v294.1)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
A,
C [auth B]		Heavy ChainIGHV3 -ephrin type-a receptor 2SAbDab (2026-04-10)
B [auth G],
D [auth C]		Light ChainIGKV1 Kappaephrin type-a receptor 2SAbDab (2026-04-10)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
E,
F [auth D]		PF25599Ephrin cysteine rich domain (Ephrin_CRD)Ephrin cysteine rich domainThis entry represents the cysteine-rich domain found in ephrin proteins. Ephrins are important cell surface proteins that act as ligands for Eph receptor tyrosine kinases Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
C [auth B]		S1CE variant of Fab C1 heavy chain---
B [auth G],
D [auth C]		S1CE variant of Fab C1 light chain---
E,
F [auth D]		Ephrin type-A receptor 2

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
E,
F [auth D]		IPR001426Tyrosine-protein kinase, receptor class V, conserved siteConserved Site
E,
F [auth D]		IPR008266Tyrosine-protein kinase, active siteActive Site
E,
F [auth D]		IPR001090Ephrin, ligand binding domainDomain
E,
F [auth D]		IPR020635Tyrosine-protein kinase, catalytic domainDomain
E,
F [auth D]		IPR000719Protein kinase domainDomain
E,
F [auth D]		IPR016257Ephrin receptor type-A /type-BFamily
E,
F [auth D]		IPR013783Immunoglobulin-like foldHomologous Superfamily
E,
F [auth D]		IPR027936Ephrin, transmembrane domainDomain
E,
F [auth D]		IPR001660Sterile alpha motif domainDomain
E,
F [auth D]		IPR034263Ephrin type-A receptor 2, ligand binding domainDomain
E,
F [auth D]		IPR017441Protein kinase, ATP binding siteBinding Site
E,
F [auth D]		IPR008979Galactose-binding-like domain superfamilyHomologous Superfamily
E,
F [auth D]		IPR050449Ephrin receptor tyrosine kinasesFamily
E,
F [auth D]		IPR001245Serine-threonine/tyrosine-protein kinase, catalytic domainDomain
E,
F [auth D]		IPR013761Sterile alpha motif/pointed domain superfamilyHomologous Superfamily
E,
F [auth D]		IPR003961Fibronectin type IIIDomain
E,
F [auth D]		IPR011009Protein kinase-like domain superfamilyHomologous Superfamily
E,
F [auth D]		IPR009030Growth factor receptor cysteine-rich domain superfamilyHomologous Superfamily
E,
F [auth D]		IPR036116Fibronectin type III superfamilyHomologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
E,
F [auth D]		Pharos:  P29317