8TP3
H1 hemagglutinin (NC99) in complex with RBS-targeting Fab 1-1-1F05
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00509 | e8tp3A1 | A: beta sandwiches | X: jelly-roll | H: Viral protein domain (From Topology) | T: Viral protein domain | F: PF00509 | ECOD (1.6) |
C | PF00509 | e8tp3C1 | A: beta sandwiches | X: jelly-roll | H: Viral protein domain (From Topology) | T: Viral protein domain | F: PF00509 | ECOD (1.6) |
E [auth G] | PF00509 | e8tp3G1 | A: beta sandwiches | X: jelly-roll | H: Viral protein domain (From Topology) | T: Viral protein domain | F: PF00509 | ECOD (1.6) |
B | PF00509 | e8tp3B1 | A: alpha bundles | X: Hemagglutinin HA2 chain (From Topology) | H: Hemagglutinin HA2 chain (From Topology) | T: Hemagglutinin HA2 chain | F: PF00509 | ECOD (1.6) |
D | PF00509 | e8tp3D1 | A: alpha bundles | X: Hemagglutinin HA2 chain (From Topology) | H: Hemagglutinin HA2 chain (From Topology) | T: Hemagglutinin HA2 chain | F: PF00509 | ECOD (1.6) |
F [auth I] | PF00509 | e8tp3I1 | A: alpha bundles | X: Hemagglutinin HA2 chain (From Topology) | H: Hemagglutinin HA2 chain (From Topology) | T: Hemagglutinin HA2 chain | F: PF00509 | ECOD (1.6) |
G [auth H] | PF07686 | e8tp3H1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
H [auth L] | PF07686 | e8tp3L1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
SAbDab Antibody Annotation SAbDab Database Homepage
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
---|---|---|---|---|---|
G [auth H] | Heavy Chain | IGHV4 | - | hemagglutinin ha1 chain | SAbDab (2024-05-31) |
H [auth L] | Light Chain | IGKV3 | Kappa | hemagglutinin ha1 chain | SAbDab (2024-05-31) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, C, E [auth G] | IPR001364 | Haemagglutinin, influenzavirus A/B | Family |
A, C, E [auth G] | IPR008980 | Viral capsid/haemagglutinin protein | Homologous Superfamily |
A, C, E [auth G] | IPR000149 | Haemagglutinin, influenzavirus A | Family |
A, C, E [auth G] | IPR013828 | Haemagglutinin, HA1 chain, alpha/beta domain superfamily | Homologous Superfamily |
B, D, F [auth I] | IPR001364 | Haemagglutinin, influenzavirus A/B | Family |
B, D, F [auth I] | IPR008980 | Viral capsid/haemagglutinin protein | Homologous Superfamily |
B, D, F [auth I] | IPR000149 | Haemagglutinin, influenzavirus A | Family |
B, D, F [auth I] | IPR013828 | Haemagglutinin, HA1 chain, alpha/beta domain superfamily | Homologous Superfamily |