Crystal structure of Epstein-Barr virus gp42 in complex with antibody 4C12


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
LSCOP2B SuperfamilyC-type lectin-like 8040257 3001261 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyC-type lectin-like 8040257 3001261 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyC-type lectin-like 8040257 3001261 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyC-type lectin-like 8040257 3001261 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
LCoV_NSP10e8tooL1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: CoV_NSP10ECOD (v295)
KCoV_NSP10e8tooK1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: CoV_NSP10ECOD (v295)
JCoV_NSP10e8tooJ1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: CoV_NSP10ECOD (v295)
Ie8tooI01 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
HCoV_NSP10e8tooH1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: CoV_NSP10ECOD (v295)
GCoV_NSP10e8tooG1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: CoV_NSP10ECOD (v295)
DCoV_NSP10e8tooD1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: CoV_NSP10ECOD (v295)
Be8tooB01 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
FCoV_NSP10e8tooF1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: CoV_NSP10ECOD (v295)
ECoV_NSP10e8tooE1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: CoV_NSP10ECOD (v295)
CCoV_NSP10e8tooC1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: CoV_NSP10ECOD (v295)
Ae8tooA01 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
B, D, G, H
Heavy ChainIGHV1 -glycoprotein 42SAbDab (2026-06-26)
A, C, E, F
Light ChainIGKV10 Kappaglycoprotein 42SAbDab (2026-06-26)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I, J, K, L
Glycoprotein 42 -
B, D, G, H
4C12 heavy chain---
A, C, E, F
4C12 light chain---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
I, J, K, L
IPR016186C-type lectin-like/link domain superfamilyHomologous Superfamily
I, J, K, L
IPR016187C-type lectin foldHomologous Superfamily