8TIE

Double nuclear outer ring of Nup84-complexes from the yeast NPC


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
B [auth b]SCOP2B SuperfamilyCoat and nuclear envelope proteins8054123 3002276 SCOP2B (2022-06-29)
I [auth m]SCOP2B SuperfamilyCoat and nuclear envelope proteins8054123 3002276 SCOP2B (2022-06-29)
C [auth c]SCOP2B SuperfamilyCoat and nuclear envelope proteins8054129 3002276 SCOP2B (2022-06-29)
J [auth n]SCOP2B SuperfamilyCoat and nuclear envelope proteins8054129 3002276 SCOP2B (2022-06-29)
A [auth a]SCOP2B SuperfamilyScaffolding nucleoporins8090980 3002255 SCOP2B (2022-06-29)
A [auth a]SCOP2B SuperfamilyNucleoporin beta-propeller domain8090978 3000456 SCOP2B (2022-06-29)
H [auth l]SCOP2B SuperfamilyNucleoporin beta-propeller domain8090978 3000456 SCOP2B (2022-06-29)
H [auth l]SCOP2B SuperfamilyScaffolding nucleoporins8090980 3002255 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
B [auth b]PF07575e8tieb1 A: alpha superhelicesX: Repetitive alpha hairpinsH: Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain (From Topology)T: Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domainF: PF07575ECOD (1.6)
I [auth m]PF07575e8tiem1 A: alpha superhelicesX: Repetitive alpha hairpinsH: Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain (From Topology)T: Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domainF: PF07575ECOD (1.6)
D [auth d]PF00400e8tied1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: PF00400ECOD (1.6)
K [auth o]PF00400e8tieo1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: PF00400ECOD (1.6)
E [auth e]PF00400e8tiee1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: PF00400ECOD (1.6)
L [auth p]PF00400e8tiep1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: PF00400ECOD (1.6)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B [auth b],
I [auth m]
Nucleoporin NUP85
C [auth c],
J [auth n]
NUP145 isoform 1
D [auth d],
K [auth o]
Protein transport protein SEC13
A [auth a],
H [auth l]
Nucleoporin NUP120
E [auth e],
L [auth p]
Nucleoporin Seh1
F [auth f],
M [auth q]
Nucleoporin NUP84
G [auth g],
N [auth r]
NUP133 isoform 1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
B [auth b],
I [auth m]
IPR011502Nucleoporin Nup85-likeFamily
C [auth c],
J [auth n]
IPR025574Nucleoporin FG repeatRepeat
C [auth c],
J [auth n]
IPR037665Nucleoporin peptidase S59-likeFamily
C [auth c],
J [auth n]
IPR036903Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain superfamilyHomologous Superfamily
C [auth c],
J [auth n]
IPR007230Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domainDomain
C [auth c],
J [auth n]
IPR021967Nuclear pore complex protein NUP96, C-terminal domainDomain
D [auth d],
K [auth o]
IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
D [auth d],
K [auth o]
IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
D [auth d],
K [auth o]
IPR037363Sec13/Seh1 familyFamily
D [auth d],
K [auth o]
IPR001680WD40 repeatRepeat
A [auth a],
H [auth l]
IPR021717Nucleoporin Nup120/160Family
E [auth e],
L [auth p]
IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
E [auth e],
L [auth p]
IPR037363Sec13/Seh1 familyFamily
E [auth e],
L [auth p]
IPR001680WD40 repeatRepeat
E [auth e],
L [auth p]
IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
F [auth f],
M [auth q]
IPR007252Nuclear pore protein 84/107Family
G [auth g],
N [auth r]
IPR037624Nuclear pore complex protein Nup133-likeFamily
G [auth g],
N [auth r]
IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
G [auth g],
N [auth r]
IPR014908Nucleoporin, Nup133/Nup155-like, N-terminalDomain
G [auth g],
N [auth r]
IPR007187Nucleoporin, Nup133/Nup155-like, C-terminalDomain