8SY7

E. coli DNA-directed RNA polymerase transcription elongation complex bound the unnatural dB-STP base pair in the active site


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyRBP11-like subunits of RNA polymerase8035907 3001655 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyRBP11-like subunits of RNA polymerase8035907 3001655 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyInsert subdomain of RNA polymerase alpha subunit8037279 3001500 SCOP2B (2022-06-29)
B [auth G]SCOP2B SuperfamilyRBP11-like subunits of RNA polymerase8035907 3001655 SCOP2B (2022-06-29)
B [auth G]SCOP2B SuperfamilyInsert subdomain of RNA polymerase alpha subunit8037279 3001500 SCOP2B (2022-06-29)
B [auth G]SCOP2B SuperfamilyRBP11-like subunits of RNA polymerase8035907 3001655 SCOP2B (2022-06-29)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
B [auth G]
DNA-directed RNA polymerase subunit alpha
C [auth I]DNA-directed RNA polymerase subunit beta
D [auth J]DNA-directed RNA polymerase subunit beta'
E [auth K]DNA-directed RNA polymerase subunit omega
F [auth N]Non-template single stranded DNA---
G [auth R]RNA oligomer---
H [auth T]Template single stranded DNA---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A,
B [auth G]
IPR011773DNA-directed RNA polymerase, alpha subunitFamily
A,
B [auth G]
IPR011260RNA polymerase, alpha subunit, C-terminalDomain
A,
B [auth G]
IPR011263DNA-directed RNA polymerase, RpoA/D/Rpb3-typeDomain
A,
B [auth G]
IPR036603RNA polymerase, RBP11-like subunitHomologous Superfamily
A,
B [auth G]
IPR011262DNA-directed RNA polymerase, insert domainDomain
A,
B [auth G]
IPR036643DNA-directed RNA polymerase, insert domain superfamilyHomologous Superfamily
C [auth I]IPR007120DNA-directed RNA polymerase, subunit 2, hybrid-binding domainDomain
C [auth I]IPR007121RNA polymerase, beta subunit, conserved siteConserved Site
C [auth I]IPR014724RNA polymerase Rpb2, OB-foldHomologous Superfamily
C [auth I]IPR007642RNA polymerase Rpb2, domain 2Domain
C [auth I]IPR015712DNA-directed RNA polymerase, subunit 2Family
C [auth I]IPR037033DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamilyHomologous Superfamily
C [auth I]IPR042107DNA-directed RNA polymerase, beta subunit, external 1 domain superfamilyHomologous Superfamily
C [auth I]IPR037034RNA polymerase Rpb2, domain 2 superfamilyHomologous Superfamily
C [auth I]IPR007645RNA polymerase Rpb2, domain 3Domain
C [auth I]IPR019462DNA-directed RNA polymerase, beta subunit, external 1 domainDomain
C [auth I]IPR010243DNA-directed RNA polymerase beta subunit, bacterial-typeFamily
C [auth I]IPR007644RNA polymerase, beta subunit, protrusionDomain
C [auth I]IPR007641RNA polymerase Rpb2, domain 7Domain
D [auth J]IPR007081RNA polymerase Rpb1, domain 5Domain
D [auth J]IPR045867DNA-directed RNA polymerase, subunit beta-primeFamily
D [auth J]IPR007083RNA polymerase Rpb1, domain 4Domain
D [auth J]IPR044893RNA polymerase Rpb1, clamp domain superfamilyHomologous Superfamily
D [auth J]IPR006592RNA polymerase, N-terminalDomain
D [auth J]IPR007066RNA polymerase Rpb1, domain 3Domain
D [auth J]IPR012754DNA-directed RNA polymerase, subunit beta-prime, bacterial typeFamily
D [auth J]IPR042102RNA polymerase Rpb1, domain 3 superfamilyHomologous Superfamily
D [auth J]IPR000722RNA polymerase, alpha subunitDomain
D [auth J]IPR038120RNA polymerase Rpb1, funnel domain superfamilyHomologous Superfamily
D [auth J]IPR007080RNA polymerase Rpb1, domain 1Domain
E [auth K]IPR006110RNA polymerase, subunit omega/Rpo6/RPB6Family
E [auth K]IPR036161RPB6/omega subunit-like superfamilyHomologous Superfamily
E [auth K]IPR003716DNA-directed RNA polymerase, omega subunitFamily