8SUP | pdb_00008sup

Structure of the 48S translation initiation complex assembled on the encephalomyocarditis virus IRES


Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B [auth p]Eukaryotic translation initiation factor 3 subunit C
E [auth s]Eukaryotic translation initiation factor 3 subunit H
F [auth t]Eukaryotic translation initiation factor 3 subunit K
I [auth 2]18S rRNA---
J [auth 3]EMCV mRNA---
K [auth A]Eukaryotic translation initiation factor 1A, X-chromosomal
L [auth B]uS2 (SA)
N [auth D]40S ribosomal protein S2---
O [auth E]uS3
P [auth F]eS4 (S4 X isoform)
Q [auth G]uS7
S [auth I]eS7
T [auth J]eS8
V [auth L]eS10 -
X [auth N]eS12
AA [auth Q]uS19
BA [auth R]uS9
CA [auth S]eS17
DA [auth T]uS13
EA [auth U]eS19
JA [auth Z]eS24
LA [auth b]eS26
MA [auth c]eS27
NA [auth d]eS28
OA [auth e]uS14
PA [auth f]eS30
QA [auth g]eS31
RA [auth h]Receptor for Activated C Kinase 1 (RACK1)
SA [auth i]Met-tRNAiMet---
UA [auth n]eL41
H [auth v]Eukaryotic translation initiation factor 3 subunit M
G [auth u]Eukaryotic translation initiation factor 3 subunit L
TA [auth j]Eukaryotic translation initiation factor 2 subunit 1---
D [auth r]Eukaryotic translation initiation factor 3 subunit F
KA [auth a]eS25
IA [auth Y]uS12
HA [auth X]uS8
GA [auth W]eS21
FA [auth V]uS10
C [auth q]Eukaryotic translation initiation factor 3 subunit E
Z [auth P]Small ribosomal subunit protein uS11
Y [auth O]uS15
W [auth M]uS17
U [auth K]uS4
R [auth H]eS6
M [auth C]eS1
A [auth o]Eukaryotic translation initiation factor 3 subunit A

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
B [auth p]IPR008905Eukaryotic translation initiation factor 3 subunit C, N-terminal domainDomain
B [auth p]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
B [auth p]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
B [auth p]IPR027516Eukaryotic translation initiation factor 3 subunit CFamily
B [auth p]IPR000717Proteasome component (PCI) domainDomain
B [auth p]IPR058999EIF3CL-like, C-terminal domainDomain
E [auth s]IPR037518MPN domainDomain
E [auth s]IPR027524Eukaryotic translation initiation factor 3 subunit HFamily
E [auth s]IPR045810eIF3h, C-terminalDomain
E [auth s]IPR050242JAMM/MPN+ metalloenzymes, peptidase M67AFamily
E [auth s]IPR000555JAB1/MPN/MOV34 metalloenzyme domainDomain
F [auth t]IPR016024Armadillo-type foldHomologous Superfamily
F [auth t]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
F [auth t]IPR033464CSN8/PSMD8/EIF3KDomain
F [auth t]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
F [auth t]IPR016020Translation initiation factor 3, subunit 12, N-terminal, eukaryoticHomologous Superfamily
F [auth t]IPR000717Proteasome component (PCI) domainDomain
F [auth t]IPR009374Eukaryotic translation initiation factor 3 subunit KFamily
K [auth A]IPR018104Translation initiation factor 1A (eIF-1A), conserved siteConserved Site
K [auth A]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
K [auth A]IPR006196RNA-binding domain, S1, IF1 typeDomain
K [auth A]IPR001253Translation initiation factor 1A (eIF-1A)Family
L [auth B]IPR032281Small ribosomal subunit protein uS2, C-terminal domainDomain
L [auth B]IPR027498Small ribosomal subunit protein uS2, eukaryotaFamily
L [auth B]IPR027504Small ribosomal subunit protein uS2, vertebratesFamily
L [auth B]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
L [auth B]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
L [auth B]IPR001865Small ribosomal subunit protein uS2Family
L [auth B]IPR005707Small ribosomal subunit protein uS2, eukaryota/archaeaFamily
O [auth E]IPR005703Small ribosomal subunit protein uS3, eukaryota/archaealFamily
O [auth E]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
O [auth E]IPR057258Small ribosomal subunit protein uS3Family
O [auth E]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
O [auth E]IPR004044K Homology domain, type 2Domain
O [auth E]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
O [auth E]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
O [auth E]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
P [auth F]IPR018199Small ribosomal subunit protein eS4, N-terminal, conserved siteConserved Site
P [auth F]IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
P [auth F]IPR032277Small ribosomal subunit protein eS4, C-terminal domainDomain
P [auth F]IPR002942RNA-binding S4 domainDomain
P [auth F]IPR013845Small ribosomal subunit protein eS4, central regionDomain
P [auth F]IPR000876Small ribosomal subunit protein eS4Family
P [auth F]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
P [auth F]IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
P [auth F]IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
P [auth F]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
P [auth F]IPR005824KOWDomain
Q [auth G]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
Q [auth G]IPR000235Small ribosomal subunit protein uS7Family
Q [auth G]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
Q [auth G]IPR023798Small ribosomal subunit protein uS7 domainDomain
Q [auth G]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
S [auth I]IPR000554Small ribosomal subunit protein eS7Family
S [auth I]IPR047861Small ribosomal subunit protein eS7, conserved siteConserved Site
T [auth J]IPR001047Small ribosomal subunit protein eS8Family
T [auth J]IPR042563Small ribosomal subunit protein eS8 subdomain, eukaryotaHomologous Superfamily
T [auth J]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
T [auth J]IPR018283Small ribosomal subunit protein eS8, conserved siteConserved Site
V [auth L]IPR037447Small ribosomal subunit protein eS10Family
V [auth L]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
V [auth L]IPR005326Plectin/eS10, N-terminalDomain
X [auth N]IPR000530Small ribosomal subunit protein eS12Family
X [auth N]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
X [auth N]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
X [auth N]IPR047860Small ribosomal subunit protein eS12, conserved siteConserved Site
AA [auth Q]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
AA [auth Q]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
AA [auth Q]IPR002222Small ribosomal subunit protein uS19Family
AA [auth Q]IPR005713Small ribosomal subunit protein uS19, eukaryota/archaeaFamily
BA [auth R]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
BA [auth R]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
BA [auth R]IPR000754Small ribosomal subunit protein uS9Family
BA [auth R]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
CA [auth S]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
CA [auth S]IPR001210Small ribosomal subunit protein eS17Family
CA [auth S]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
DA [auth T]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
DA [auth T]IPR001892Small ribosomal subunit protein uS13Family
DA [auth T]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
DA [auth T]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
EA [auth U]IPR001266Small ribosomal subunit protein eS19Family
EA [auth U]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
EA [auth U]IPR018277Small ribosomal subunit protein eS19, conserved siteConserved Site
EA [auth U]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
JA [auth Z]IPR053709Eukaryotic Ribosomal Protein eS24Homologous Superfamily
JA [auth Z]IPR001976Small ribosomal subunit protein eS24Family
JA [auth Z]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
JA [auth Z]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
LA [auth b]IPR038551Ribosomal protein eS26 superfamilyHomologous Superfamily
LA [auth b]IPR000892Small ribosomal subunit protein eS26Family
LA [auth b]IPR047864Ribosomal protein eS26, conserved siteConserved Site
MA [auth c]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
MA [auth c]IPR000592Small ribosomal subunit protein eS27Family
MA [auth c]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
NA [auth d]IPR028626Ribosomal protein eS28 conserved siteConserved Site
NA [auth d]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
NA [auth d]IPR000289Small ribosomal subunit protein eS28Family
OA [auth e]IPR001209Small ribosomal subunit protein uS14Family
OA [auth e]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
OA [auth e]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
OA [auth e]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
PA [auth f]IPR039415Ubiquitin-like protein FUBIDomain
PA [auth f]IPR019956Ubiquitin domainDomain
PA [auth f]IPR019954Ubiquitin conserved siteConserved Site
PA [auth f]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
PA [auth f]IPR000626Ubiquitin-like domainDomain
PA [auth f]IPR006846Small ribosomal subunit protein eS30Family
QA [auth g]IPR019954Ubiquitin conserved siteConserved Site
QA [auth g]IPR000626Ubiquitin-like domainDomain
QA [auth g]IPR038582Small ribosomal subunit protein eS31 eukaryotic superfamilyHomologous Superfamily
QA [auth g]IPR002906Small ribosomal subunit protein eS31Domain
QA [auth g]IPR019956Ubiquitin domainDomain
QA [auth g]IPR050158Ubiquitin and ubiquitin-likeFamily
QA [auth g]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
QA [auth g]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
RA [auth h]IPR019775WD40 repeat, conserved siteConserved Site
RA [auth h]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
RA [auth h]IPR045223Small ribosomal subunit protein RACK1-likeFamily
RA [auth h]IPR020472PAC1/LIS1-like, WD-40 repeatRepeat
RA [auth h]IPR001680WD40 repeatRepeat
RA [auth h]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
UA [auth n]IPR007836Large ribosomal subunit protein eS32Family
H [auth v]IPR045237Eukaryotic translation initiation factor 3 subunit M eIF3m/COP9 signalosome complex subunit 7 COPS7Family
H [auth v]IPR000717Proteasome component (PCI) domainDomain
H [auth v]IPR016024Armadillo-type foldHomologous Superfamily
H [auth v]IPR040750eIF3 subunit M, C-terminal helix domainDomain
H [auth v]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
H [auth v]IPR027528Eukaryotic translation initiation factor 3 subunit MFamily
G [auth u]IPR000717Proteasome component (PCI) domainDomain
G [auth u]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
G [auth u]IPR019382Translation initiation factor 3 complex subunit LFamily
D [auth r]IPR027531Eukaryotic translation initiation factor 3 subunit FFamily
D [auth r]IPR024969EIF3F/CSN6-like, C-terminalDomain
D [auth r]IPR037518MPN domainDomain
D [auth r]IPR000555JAB1/MPN/MOV34 metalloenzyme domainDomain
KA [auth a]IPR004977Small ribosomal subunit protein eS25Family
KA [auth a]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
IA [auth Y]IPR006032Small ribosomal subunit protein uS12Family
IA [auth Y]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
IA [auth Y]IPR005680Small ribosomal subunit protein uS12, eukaryota/archaeaFamily
HA [auth X]IPR000630Small ribosomal subunit protein uS8Family
HA [auth X]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
HA [auth X]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
GA [auth W]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
GA [auth W]IPR018279Small ribosomal subunit protein eS21, conserved siteConserved Site
GA [auth W]IPR001931Small ribosomal subunit protein eS21Family
FA [auth V]IPR001848Small ribosomal subunit protein uS10Family
FA [auth V]IPR027486Small ribosomal subunit protein uS10 domainDomain
FA [auth V]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
FA [auth V]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
FA [auth V]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
C [auth q]IPR016650Eukaryotic translation initiation factor 3 subunit EFamily
C [auth q]IPR019010Eukaryotic translation initiation factor 3 subunit E, N-terminalDomain
C [auth q]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
C [auth q]IPR000717Proteasome component (PCI) domainDomain
Z [auth P]IPR001971Small ribosomal subunit protein uS11Family
Z [auth P]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
Z [auth P]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
Y [auth O]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
Y [auth O]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
Y [auth O]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotaFamily
Y [auth O]IPR000589Small ribosomal subunit protein uS15Family
W [auth M]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
W [auth M]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
W [auth M]IPR000266Small ribosomal subunit protein uS17Family
W [auth M]IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
W [auth M]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
U [auth K]IPR002942RNA-binding S4 domainDomain
U [auth K]IPR022801Small ribosomal subunit protein uS4Family
U [auth K]IPR005710Small ribosomal subunit protein uS4, eukaryota/archaeaFamily
U [auth K]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
U [auth K]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
U [auth K]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
R [auth H]IPR014401Small ribosomal subunit protein eS6-likeFamily
R [auth H]IPR001377Small ribosomal subunit protein eS6Family
R [auth H]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
M [auth C]IPR001593Small ribosomal subunit protein eS1Family
M [auth C]IPR018281Small ribosomal subunit protein eS1, conserved siteConserved Site
M [auth C]IPR027500Small ribosomal subunit protein eS1, eukaryotaFamily
A [auth o]IPR027512Eukaryotic translation initiation factor 3 subunit AFamily
A [auth o]IPR000717Proteasome component (PCI) domainDomain
A [auth o]IPR054711eIF3a, PCI domain, TPR-like regionDomain