Structure of ESRRB nucleosome bound OCT4 at site c
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| K [auth D] | SCOP2B Superfamily | Core histone-like | 8066283 | 3001387 | SCOP2B (2022-06-29) |
| G [auth H] | SCOP2B Superfamily | Core histone-like | 8066283 | 3001387 | SCOP2B (2022-06-29) |
| J [auth C] | SCOP2B Superfamily | Core histone-like | 8099192 | 3001387 | SCOP2B (2022-06-29) |
| F [auth G] | SCOP2B Superfamily | Core histone-like | 8099192 | 3001387 | SCOP2B (2022-06-29) |
| I [auth B] | SCOP2B Superfamily | Core histone-like | 8070545 | 3001387 | SCOP2B (2022-06-29) |
| E [auth F] | SCOP2B Superfamily | Core histone-like | 8070545 | 3001387 | SCOP2B (2022-06-29) |
| H [auth A] | SCOP2B Superfamily | Core histone-like | 8039340 | 3001387 | SCOP2B (2022-06-29) |
| D [auth E] | SCOP2B Superfamily | Core histone-like | 8039340 | 3001387 | SCOP2B (2022-06-29) |
| C [auth L] | SCOP2B Superfamily | lambda C1 repressor DNA-binding domain-like | 8094725 | 3000119 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| M [auth K] | zf-C2H2_16 | e8spuK1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: zf-C2H2_16 | ECOD (v294.1) |
| L [auth N] | zf-C2H2_16 | e8spuN1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: zf-C2H2_16 | ECOD (v294.1) |
| K [auth D] | zf-C2H2_16 | e8spuD1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: zf-C2H2_16 | ECOD (v294.1) |
| G [auth H] | zf-C2H2_16 | e8spuH1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: zf-C2H2_16 | ECOD (v294.1) |
| J [auth C] | zf-C2H2_16 | e8spuC1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: zf-C2H2_16 | ECOD (v294.1) |
| F [auth G] | zf-C2H2_16 | e8spuG1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: zf-C2H2_16 | ECOD (v294.1) |
| I [auth B] | zf-C2H2_16 | e8spuB1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: zf-C2H2_16 | ECOD (v294.1) |
| E [auth F] | zf-C2H2_16 | e8spuF1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: zf-C2H2_16 | ECOD (v294.1) |
| H [auth A] | zf-C2H2_16 | e8spuA1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: zf-C2H2_16 | ECOD (v294.1) |
| D [auth E] | zf-C2H2_16 | e8spuE1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: zf-C2H2_16 | ECOD (v294.1) |
| C [auth L] | zf-C2H2_16 | e8spuL1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: zf-C2H2_16 | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| M [auth K] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
| L [auth N] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| F [auth G], J [auth C] | PF16211 | C-terminus of histone H2A (Histone_H2A_C) | C-terminus of histone H2A | - | Family |
| E [auth F], I [auth B] | PF15511 | Centromere kinetochore component CENP-T histone fold (CENP-T_C) | Centromere kinetochore component CENP-T histone fold | CENP-T is a family of vertebral kinetochore proteins that associates directly with CENP-W. The N-terminus of CENP-T proteins interacts directly with the Ndc80 complex in the outer kinetochore. Importantly, the CENP-T-W complex does not directly asso ... | Domain |
| D [auth E], H [auth A] | PF00125 | Core histone H2A/H2B/H3/H4 domain (Histone) | Core histone H2A/H2B/H3/H4 domain | Domain | |
| C [auth L] | PF00157 | Pou domain - N-terminal to homeobox domain (Pou) | Pou domain - N-terminal to homeobox domain | Domain | |














