Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
C [auth L]SCOP2B Superfamilylambda C1 repressor DNA-binding domain-like8094725 3000119 SCOP2B (2022-06-29)
D [auth A]SCOP2B SuperfamilyCore histone-like8039340 3001387 SCOP2B (2022-06-29)
H [auth E]SCOP2B SuperfamilyCore histone-like8039340 3001387 SCOP2B (2022-06-29)
E [auth B]SCOP2B SuperfamilyCore histone-like8070545 3001387 SCOP2B (2022-06-29)
I [auth F]SCOP2B SuperfamilyCore histone-like8070545 3001387 SCOP2B (2022-06-29)
J [auth G]SCOP2B SuperfamilyCore histone-like8099192 3001387 SCOP2B (2022-06-29)
F [auth C]SCOP2B SuperfamilyCore histone-like8099192 3001387 SCOP2B (2022-06-29)
G [auth D]SCOP2B SuperfamilyCore histone-like8066283 3001387 SCOP2B (2022-06-29)
K [auth H]SCOP2B SuperfamilyCore histone-like8066283 3001387 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
C [auth L]PF00157e8spsL1 A: alpha arraysX: HTHH: HTHT: tetra-helical, lambda repressor-likeF: PF00157ECOD (1.6)
N [auth M]PF00046e8spsM1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF00046ECOD (1.6)
D [auth A]PF00125e8spsA1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: PF00125ECOD (1.6)
H [auth E]PF00125e8spsE1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: PF00125ECOD (1.6)
E [auth B]PF15511e8spsB1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: PF15511ECOD (1.6)
I [auth F]PF15511e8spsF1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: PF15511ECOD (1.6)
J [auth G]PF00125,PF16211e8spsG1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: PF00125,PF16211ECOD (1.6)
F [auth C]PF00125,PF16211e8spsC1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: PF00125,PF16211ECOD (1.6)
G [auth D]PF00125e8spsD1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: PF00125ECOD (1.6)
K [auth H]PF00125e8spsH1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: PF00125ECOD (1.6)
L [auth K]PF07686e8spsK1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07686ECOD (1.6)
M [auth N]PF07686e8spsN1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07686ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
C [auth L],
N [auth M]
PF00046Homeodomain (Homeodomain)Homeodomain- Domain
C [auth L],
N [auth M]
PF00157Pou domain - N-terminal to homeobox domain (Pou)Pou domain - N-terminal to homeobox domain- Domain
D [auth A],
H [auth E]
PF00125Core histone H2A/H2B/H3/H4 (Histone)Core histone H2A/H2B/H3/H4- Domain
E [auth B],
I [auth F]
PF15511Centromere kinetochore component CENP-T histone fold (CENP-T_C)Centromere kinetochore component CENP-T histone foldCENP-T is a family of vertebral kinetochore proteins that associates directly with CENP-W. The N-terminus of CENP-T proteins interacts directly with the Ndc80 complex in the outer kinetochore. Importantly, the CENP-T-W complex does not directly asso ...CENP-T is a family of vertebral kinetochore proteins that associates directly with CENP-W. The N-terminus of CENP-T proteins interacts directly with the Ndc80 complex in the outer kinetochore. Importantly, the CENP-T-W complex does not directly associate with CENP-A, but with histone H3 in the centromere region. CENP-T and -W form a hetero-tetramer with CENP-S and -X and bind to a ~100 bp region of nucleosome-free DNA forming a nucleosome-like structure. The DNA-CENP-T-W-S-X complex is likely to be associated with histone H3-containing nucleosomes rather than with CENP-nucleosomes. This domain is the C-terminal histone fold domain of CENP-T, which associates with chromatin [2-3].
Domain
F [auth C],
J [auth G]
PF16211C-terminus of histone H2A (Histone_H2A_C)C-terminus of histone H2A- Family
F [auth C],
J [auth G]
PF00125Core histone H2A/H2B/H3/H4 (Histone)Core histone H2A/H2B/H3/H4- Domain
G [auth D],
K [auth H]
PF00125Core histone H2A/H2B/H3/H4 (Histone)Core histone H2A/H2B/H3/H4- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth I]DNA (168-MER)---
B [auth J]DNA (168-MER)---
C [auth L],
N [auth M]
Maltodextrin-binding protein,POU domain, class 5, transcription factor 1
D [auth A],
H [auth E]
Histone H3.1
E [auth B],
I [auth F]
Histone H4
F [auth C],
J [auth G]
Histone H2A type 2-C -
G [auth D],
K [auth H]
Histone H2B type 2-E
L [auth K],
M [auth N]
ScFv---

InterPro: Protein Family Classification InterPro Database Homepage

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
C [auth L],
N [auth M]
PharosQ01860
D [auth A],
H [auth E]
PharosP68431
E [auth B],
I [auth F]
PharosP62805
F [auth C],
J [auth G]
PharosQ16777
G [auth D],
K [auth H]
PharosQ16778