8SLP | pdb_00008slp

Cryo-EM structure of the rat TRPM5 channel in 2mM calcium, high-2

External Resource: Annotation


Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth D],
B [auth A],
C [auth B],
D [auth C]		PF18139SLOG in TRPM (LSDAT_euk)SLOG in TRPMFamily in the SLOG superfamily, found in several eukaryotic channels including diverse ciliate channels and the TRPM class of animal ion channels. Positioned near the N-terminus of all TRPM channels, it is predicted to play a regulatory role for the ...Family in the SLOG superfamily, found in several eukaryotic channels including diverse ciliate channels and the TRPM class of animal ion channels. Positioned near the N-terminus of all TRPM channels, it is predicted to play a regulatory role for the channel in potentially recognizing a universal nucleotide or nucleotide-derived ligand [1].
Domain
A [auth D],
B [auth A],
C [auth B],
D [auth C]		PF00520Ion transport protein (Ion_trans)Ion transport protein- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth D],
B [auth A],
C [auth B],
D [auth C]		Transient receptor potential cation channel subfamily M member 5

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth D],
B [auth A],
C [auth B],
D [auth C]		IPR005821Ion transport domainDomain
A [auth D],
B [auth A],
C [auth B],
D [auth C]		IPR057366TRPM-like domainDomain
A [auth D],
B [auth A],
C [auth B],
D [auth C]		IPR041491TRPM, SLOG domainDomain
A [auth D],
B [auth A],
C [auth B],
D [auth C]		IPR050927Transient receptor potential cation channel MFamily

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

ChainsExternal LinkComment
PDBTMAnnotated as membrane protein by PDBTM