8RWV | pdb_00008rwv

Human OCCM DNA licensing intermediate


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
G [auth B]SCOP2B SuperfamilyWinged helix DNA-binding domain 8090220 3000034 SCOP2B (2022-06-29)
L [auth G]SCOP2B SuperfamilyWinged helix DNA-binding domain 8057020 3000034 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth 2]PF00493MCM P-loop domain (MCM)MCM P-loop domainDomain
A [auth 2]PF14551MCM N-terminal domain (MCM_N)MCM N-terminal domainThis family contains the N-terminal domain of MCM proteins. Domain
A [auth 2]PF17855MCM AAA-lid domain (MCM_lid)MCM AAA-lid domainThis entry represents the AAA-lid domain found in MCM proteins. Domain
A [auth 2]PF17207MCM OB domain (MCM_OB)MCM OB domainThis family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2]. Domain
D [auth 6]PF00493MCM P-loop domain (MCM)MCM P-loop domainDomain
D [auth 6]PF14551MCM N-terminal domain (MCM_N)MCM N-terminal domainThis family contains the N-terminal domain of MCM proteins. Domain
D [auth 6]PF17855MCM AAA-lid domain (MCM_lid)MCM AAA-lid domainThis entry represents the AAA-lid domain found in MCM proteins. Domain
D [auth 6]PF17207MCM OB domain (MCM_OB)MCM OB domainThis family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2]. Domain
F [auth A]PF17872AAA lid domain (AAA_lid_10)AAA lid domainThis entry represents the alpha helical AAA+ lid domain that is found to the C-terminus of AAA domains. Domain
F [auth A]PF09079CDC6, C terminal winged helix domain (WHD_Cdc6)CDC6, C terminal winged helix domainThe C terminal domain of CDC6 assumes a winged helix fold, with a five alpha-helical bundle (alpha15-alpha19) structure, backed on one side by three beta strands (beta6-beta8). It has been shown that this domain acts as a DNA-localisation factor, how ...The C terminal domain of CDC6 assumes a winged helix fold, with a five alpha-helical bundle (alpha15-alpha19) structure, backed on one side by three beta strands (beta6-beta8). It has been shown that this domain acts as a DNA-localisation factor, however its exact function is, as yet, unknown. Putative functions include: (1) mediation of protein-protein interactions and (2) regulation of nucleotide binding and hydrolysis. Mutagenesis studies have shown that this domain is essential for appropriate Cdc6 activity [1].
Domain
F [auth A]PF00004ATPase family associated with various cellular activities (AAA) (AAA)ATPase family associated with various cellular activities (AAA)AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. Domain
H [auth C]PF19675Origin recognition complex subunit 3 insertion domain (ORC3_ins)Origin recognition complex subunit 3 insertion domain- Family
H [auth C]PF07034Origin recognition complex (ORC) subunit 3 N-terminus (ORC3_N)Origin recognition complex (ORC) subunit 3 N-terminusThis family represents the N-terminus (approximately 300 residues) of subunit 3 of the eukaryotic origin recognition complex (ORC). Origin recognition complex (ORC) is composed of six subunits that are essential for cell viability. They collectively ...This family represents the N-terminus (approximately 300 residues) of subunit 3 of the eukaryotic origin recognition complex (ORC). Origin recognition complex (ORC) is composed of six subunits that are essential for cell viability. They collectively bind to the autonomously replicating sequence (ARS) in a sequence-specific manner and lead to the chromatin loading of other replication factors that are essential for initiation of DNA replication [1]. This domain is predicted to contain an AAA+ fold but lack the residues important for ATP hydrolysis, thus, it is called AAA+ like [2].
Domain
H [auth C]PF18137Origin recognition complex winged helix C-terminal (WHD_ORC)Origin recognition complex winged helix C-terminalThis is the C-terminal winged-helix (WH) DNA-binding domain of the origin recognition complex present in Drosophila melanogaster. The WH domain is responsible for recognizing origin sequences [1]. Domain
I [auth D]PF13191AAA ATPase domain (AAA_16)AAA ATPase domainThis family of domains contain a P-loop motif that is characteristic of the AAA superfamily. Domain
I [auth D]PF14629Origin recognition complex (ORC) subunit 4 C-terminus (ORC4_C)Origin recognition complex (ORC) subunit 4 C-terminus- Family
J [auth E]PF13191AAA ATPase domain (AAA_16)AAA ATPase domainThis family of domains contain a P-loop motif that is characteristic of the AAA superfamily. Domain
J [auth E]PF21639ORC5, lid domain (ORC5_lid)ORC5, lid domainORC5 is a component of the origin recognition complex (ORC) that binds origins of replication. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. This is the lid domain, which with the N-terminal RecA-fold ...ORC5 is a component of the origin recognition complex (ORC) that binds origins of replication. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. This is the lid domain, which with the N-terminal RecA-fold domain, constitutes the well-known AAA+ domain [1].
Domain
J [auth E]PF14630Origin recognition complex (ORC) subunit 5 C-terminus (ORC5_C)Origin recognition complex (ORC) subunit 5 C-terminusThis entry represents the C-terminus of origin recognition complex subunit 5 [1,2], which consists of a winged helix domain (WHD). Domain
K [auth F]PF13191AAA ATPase domain (AAA_16)AAA ATPase domainThis family of domains contain a P-loop motif that is characteristic of the AAA superfamily. Domain
K [auth F]PF09079CDC6, C terminal winged helix domain (WHD_Cdc6)CDC6, C terminal winged helix domainThe C terminal domain of CDC6 assumes a winged helix fold, with a five alpha-helical bundle (alpha15-alpha19) structure, backed on one side by three beta strands (beta6-beta8). It has been shown that this domain acts as a DNA-localisation factor, how ...The C terminal domain of CDC6 assumes a winged helix fold, with a five alpha-helical bundle (alpha15-alpha19) structure, backed on one side by three beta strands (beta6-beta8). It has been shown that this domain acts as a DNA-localisation factor, however its exact function is, as yet, unknown. Putative functions include: (1) mediation of protein-protein interactions and (2) regulation of nucleotide binding and hydrolysis. Mutagenesis studies have shown that this domain is essential for appropriate Cdc6 activity [1].
Domain
K [auth F]PF22606Cdc6/ORC-like, ATPase lid domain (Cdc6-ORC-like_ATPase_lid)Cdc6/ORC-like, ATPase lid domainThis entry represents the AAA+ ATPase lid domain of eukaryotic Cdc6/ORC proteins and its homologues from archaea [1-5]. Domain
L [auth G]PF08839DNA replication factor CDT1 like (CDT1)DNA replication factor CDT1 likeCDT1 is a component of the replication licensing system and promotes the loading of the mini-chromosome maintenance complex onto chromatin. Geminin is an inhibitor of CDT1 and prevents inappropriate re-initiation of replication on an already fired o ...CDT1 is a component of the replication licensing system and promotes the loading of the mini-chromosome maintenance complex onto chromatin. Geminin is an inhibitor of CDT1 and prevents inappropriate re-initiation of replication on an already fired origin. This region of CDT1 binds to Geminin [1].
Domain
L [auth G]PF16679DNA replication factor Cdt1 C-terminal domain (CDT1_C)DNA replication factor Cdt1 C-terminal domainThis is the C-terminal domain of DNA replication factor Cdt1. This domain binds the MCM complex [1]. Domain
E [auth 7]PF00493MCM P-loop domain (MCM)MCM P-loop domainDomain
E [auth 7]PF14551MCM N-terminal domain (MCM_N)MCM N-terminal domainThis family contains the N-terminal domain of MCM proteins. Domain
E [auth 7]PF17855MCM AAA-lid domain (MCM_lid)MCM AAA-lid domainThis entry represents the AAA-lid domain found in MCM proteins. Domain
E [auth 7]PF17207MCM OB domain (MCM_OB)MCM OB domainThis family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2]. Domain
C [auth 4]PF00493MCM P-loop domain (MCM)MCM P-loop domainDomain
C [auth 4]PF14551MCM N-terminal domain (MCM_N)MCM N-terminal domainThis family contains the N-terminal domain of MCM proteins. Domain
C [auth 4]PF17855MCM AAA-lid domain (MCM_lid)MCM AAA-lid domainThis entry represents the AAA-lid domain found in MCM proteins. Domain
C [auth 4]PF17207MCM OB domain (MCM_OB)MCM OB domainThis family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2]. Domain
B [auth 3]PF00493MCM P-loop domain (MCM)MCM P-loop domainDomain
B [auth 3]PF14551MCM N-terminal domain (MCM_N)MCM N-terminal domainThis family contains the N-terminal domain of MCM proteins. Domain
B [auth 3]PF17855MCM AAA-lid domain (MCM_lid)MCM AAA-lid domainThis entry represents the AAA-lid domain found in MCM proteins. Domain
B [auth 3]PF17207MCM OB domain (MCM_OB)MCM OB domainThis family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2]. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 2]DNA replication licensing factor MCM2
D [auth 6]DNA replication licensing factor MCM6
F [auth A]Origin recognition complex subunit 1
G [auth B]Origin recognition complex subunit 2
H [auth C]Isoform 2 of Origin recognition complex subunit 3
I [auth D]Origin recognition complex subunit 4
J [auth E]Origin recognition complex subunit 5
K [auth F]Cell division control protein 6 homolog
L [auth G]DNA replication factor Cdt1
M [auth H]DNA---
N [auth J]DNA---
E [auth 7]DNA replication licensing factor MCM7
C [auth 4]DNA replication licensing factor MCM4
B [auth 3]Isoform 2 of DNA replication licensing factor MCM3

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth 2]IPR031327Mini-chromosome maintenance proteinFamily
A [auth 2]IPR018525Mini-chromosome maintenance, conserved siteConserved Site
A [auth 2]IPR001208MCM domainDomain
A [auth 2]IPR041562MCM, AAA-lid domainDomain
A [auth 2]IPR008045DNA replication licensing factor Mcm2Family
A [auth 2]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
A [auth 2]IPR027925MCM, N-terminal domainDomain
A [auth 2]IPR033762MCM OB domainDomain
A [auth 2]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
D [auth 6]IPR008049DNA replication licensing factor Mcm6Family
D [auth 6]IPR041024Mcm6, C-terminal winged-helix domainDomain
D [auth 6]IPR031327Mini-chromosome maintenance proteinFamily
D [auth 6]IPR018525Mini-chromosome maintenance, conserved siteConserved Site
D [auth 6]IPR001208MCM domainDomain
D [auth 6]IPR041562MCM, AAA-lid domainDomain
D [auth 6]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
D [auth 6]IPR027925MCM, N-terminal domainDomain
D [auth 6]IPR033762MCM OB domainDomain
D [auth 6]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
F [auth A]IPR041083AAA lid domainDomain
F [auth A]IPR043151Bromo adjacent homology (BAH) domain superfamilyHomologous Superfamily
F [auth A]IPR001025Bromo adjacent homology (BAH) domainDomain
F [auth A]IPR015163Cdc6, C-terminalDomain
F [auth A]IPR003593AAA+ ATPase domainDomain
F [auth A]IPR003959ATPase, AAA-type, coreDomain
F [auth A]IPR050311Origin recognition complex 1/Cell division control protein 6Family
F [auth A]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
G [auth B]IPR007220Origin recognition complex, subunit 2Family
G [auth B]IPR056773Origin recognition complex subunit 2, winged-helix domainDomain
G [auth B]IPR056772Origin recognition complex subunit 2, RecA-like domainDomain
H [auth C]IPR020795Origin recognition complex, subunit 3Family
H [auth C]IPR045663Origin recognition complex subunit 3, insertion domainDomain
H [auth C]IPR040855Origin recognition complex subunit 3, winged helix C-terminalDomain
H [auth C]IPR045667Origin recognition complex subunit 3, N-terminalDomain
I [auth D]IPR041664Orc1-like, AAA ATPase domainDomain
I [auth D]IPR032705Origin recognition complex subunit 4, C-terminalDomain
I [auth D]IPR003593AAA+ ATPase domainDomain
I [auth D]IPR016527Origin recognition complex subunit 4Family
I [auth D]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
J [auth E]IPR048866ORC5, lid domainDomain
J [auth E]IPR047088Origin recognition complex subunit 5, C-terminalDomain
J [auth E]IPR041664Orc1-like, AAA ATPase domainDomain
J [auth E]IPR020796Origin recognition complex, subunit 5Family
J [auth E]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
K [auth F]IPR015163Cdc6, C-terminalDomain
K [auth F]IPR003593AAA+ ATPase domainDomain
K [auth F]IPR016314Cell division protein Cdc6/18Family
K [auth F]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
K [auth F]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
K [auth F]IPR054425Cdc6/ORC1-like, ATPase lid domainDomain
K [auth F]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
K [auth F]IPR041664Orc1-like, AAA ATPase domainDomain
K [auth F]IPR050311Origin recognition complex 1/Cell division control protein 6Family
L [auth G]IPR038090DNA replication factor Cdt1, C-terminal WH domain superfamilyHomologous Superfamily
L [auth G]IPR032054DNA replication factor Cdt1, C-terminalDomain
L [auth G]IPR045173DNA replication factor Cdt1Family
L [auth G]IPR014939CDT1 Geminin-binding domain-likeDomain
L [auth G]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
E [auth 7]IPR031327Mini-chromosome maintenance proteinFamily
E [auth 7]IPR008050DNA replication licensing factor Mcm7Family
E [auth 7]IPR018525Mini-chromosome maintenance, conserved siteConserved Site
E [auth 7]IPR003593AAA+ ATPase domainDomain
E [auth 7]IPR001208MCM domainDomain
E [auth 7]IPR041562MCM, AAA-lid domainDomain
E [auth 7]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
E [auth 7]IPR027925MCM, N-terminal domainDomain
E [auth 7]IPR033762MCM OB domainDomain
E [auth 7]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
C [auth 4]IPR027925MCM, N-terminal domainDomain
C [auth 4]IPR031327Mini-chromosome maintenance proteinFamily
C [auth 4]IPR008047Mini-chromosome maintenance complex protein 4Family
C [auth 4]IPR018525Mini-chromosome maintenance, conserved siteConserved Site
C [auth 4]IPR033762MCM OB domainDomain
C [auth 4]IPR001208MCM domainDomain
C [auth 4]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
C [auth 4]IPR041562MCM, AAA-lid domainDomain
C [auth 4]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
B [auth 3]IPR031327Mini-chromosome maintenance proteinFamily
B [auth 3]IPR018525Mini-chromosome maintenance, conserved siteConserved Site
B [auth 3]IPR003593AAA+ ATPase domainDomain
B [auth 3]IPR001208MCM domainDomain
B [auth 3]IPR041562MCM, AAA-lid domainDomain
B [auth 3]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
B [auth 3]IPR027925MCM, N-terminal domainDomain
B [auth 3]IPR056575MCM3-like, winged helix domainDomain
B [auth 3]IPR008046DNA replication licensing factor Mcm3Family
B [auth 3]IPR033762MCM OB domainDomain
B [auth 3]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A [auth 2]PharosP49736
D [auth 6]PharosQ14566
F [auth A]PharosQ13415
G [auth B]PharosQ13416
H [auth C]PharosQ9UBD5
I [auth D]PharosO43929
J [auth E]PharosO43913
K [auth F]PharosQ99741
L [auth G]PharosQ9H211
E [auth 7]PharosP33993
C [auth 4]PharosP33991
B [auth 3]PharosP25205