Conformational Landscape of the Type V-K CRISPR-associated TransposonIntegration Assembly CAST V-K TnsB domain local-refinement map
External Resource: Annotation
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| J [auth U] | WD40 | e8rkvU1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| I [auth T] | WD40 | e8rkvT1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| H [auth S] | WD40 | e8rkvS1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| G [auth R] | WD40 | e8rkvR1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| G [auth R], H [auth S], I [auth T], J [auth U] | TnsB | - | ||
| F [auth 7] | Target strand | - | - | - |
| E [auth 6] | Non-target strand - RE | - | - | - |
| D [auth 5] | RE | - | - | - |
| C [auth 4] | LE | - | - | - |
| B [auth 3] | Target strand - LE | - | - | - |
| A [auth 2] | Non-target strand - LE | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| G [auth R], H [auth S], I [auth T], J [auth U] | IPR036397 | Ribonuclease H superfamily | Homologous Superfamily |
| G [auth R], H [auth S], I [auth T], J [auth U] | IPR009057 | Homedomain-like superfamily | Homologous Superfamily |
| G [auth R], H [auth S], I [auth T], J [auth U] | IPR009004 | Transposase, Mu, C-terminal | Homologous Superfamily |
| G [auth R], H [auth S], I [auth T], J [auth U] | IPR001584 | Integrase, catalytic core | Domain |
| G [auth R], H [auth S], I [auth T], J [auth U] | IPR012337 | Ribonuclease H-like superfamily | Homologous Superfamily |
| G [auth R], H [auth S], I [auth T], J [auth U] | IPR015378 | Transposase-like, Mu, C-terminal | Domain |














