Annotations: 8R5M

E-selectin complexed with glycomimetic ligand DS0567

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	C-type lectin-like	8035760	3001261	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	EGF/Laminin-like	8035761	3000412	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Rnf-Nqr	e8r5mA1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Rnf-Nqr	ECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF00008	EGF-like domain (EGF)	EGF-like domain	There is no clear separation between noise and signal. Pfam:PF00053 is very similar, but has 8 instead of 6 conserved cysteines. Includes some cytokine receptors. The EGF domain misses the N-terminus regions of the Ca2+ binding EGF domains (this is t ...	There is no clear separation between noise and signal. Pfam:PF00053 is very similar, but has 8 instead of 6 conserved cysteines. Includes some cytokine receptors. The EGF domain misses the N-terminus regions of the Ca2+ binding EGF domains (this is the main reason of discrepancy between swiss-prot domain start/end and Pfam). The family is hard to model due to many similar but different sub-types of EGF domains. Pfam certainly misses a number of EGF domains.	Domain
A	PF00084	Sushi repeat (SCR repeat) (Sushi)	Sushi repeat (SCR repeat)		Domain
A	PF00059	Lectin C-type domain (Lectin_C)	Lectin C-type domain	This family includes both long and short form C-type	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	E-selectin	sialic acid binding organic acid binding binding ion binding anion binding carboxylic acid binding carbohydrate derivative binding small molecule binding phospholipase binding protein binding enzyme binding oligosaccharide binding carbohydrate binding molecular transducer activity sialic acid binding organic acid binding binding ion binding anion binding carboxylic acid binding carbohydrate derivative binding small molecule binding phospholipase binding protein binding enzyme binding oligosaccharide binding carbohydrate binding molecular transducer activity transmembrane signaling receptor activity signaling receptor activity	leukocyte tethering or rolling leukocyte cell-cell adhesion leukocyte migration cell adhesion cell-cell adhesion immune system process leukocyte adhesion to vascular endothelial cell cellular extravasation cell migration cellular process cell motility regulation of localization import into cell regulation of cellular component organization leukocyte tethering or rolling leukocyte cell-cell adhesion leukocyte migration cell adhesion cell-cell adhesion immune system process leukocyte adhesion to vascular endothelial cell cellular extravasation cell migration cellular process cell motility regulation of localization import into cell regulation of cellular component organization regulation of cellular process positive regulation of cellular component organization receptor internalization transport positive regulation of biological process regulation of receptor internalization vesicle-mediated transport cellular component organization localization positive regulation of endocytosis cellular component organization or biogenesis positive regulation of receptor-mediated endocytosis positive regulation of cellular process regulation of endocytosis regulation of biological process regulation of transport regulation of receptor-mediated endocytosis biological regulation regulation of vesicle-mediated transport establishment of localization positive regulation of receptor internalization positive regulation of transport endocytosis receptor-mediated endocytosis response to peptide response to stimulus response to chemical response to cytokine response to interleukin-1 cellular response to stimulus signaling intracellular signal transduction cell communication calcium-mediated signaling intracellular signaling cassette signal transduction defense response response to stress inflammatory response leukocyte migration involved in inflammatory response actin filament-based process heterophilic cell-cell adhesion regulation of defense response regulation of response to external stimulus regulation of inflammatory response response to external stimulus regulation of response to stimulus regulation of response to stress regulation of cell motility positive regulation of leukocyte cell-cell adhesion regulation of leukocyte adhesion to vascular endothelial cell positive regulation of cell-cell adhesion positive regulation of leukocyte tethering or rolling regulation of cell migration regulation of cell-cell adhesion regulation of immune system process locomotion positive regulation of cell adhesion regulation of cell adhesion regulation of leukocyte migration positive regulation of leukocyte adhesion to vascular endothelial cell regulation of leukocyte tethering or rolling regulation of locomotion regulation of leukocyte cell-cell adhesion regulation of cellular extravasation phospholipase C-activating G protein-coupled receptor signaling pathway G protein-coupled receptor signaling pathway biological process involved in interspecies interaction between organisms response to lipid response to other organism response to oxygen-containing compound response to lipopolysaccharide response to biotic stimulus response to bacterium response to external biotic stimulus response to molecule of bacterial origin response to tumor necrosis factor	cell periphery cellular anatomical structure cell surface membrane plasma membrane external side of plasma membrane side of membrane clathrin-coated pit endomembrane system membrane microdomain membrane raft plasma membrane raft plasma membrane region caveola cell periphery cellular anatomical structure cell surface membrane plasma membrane external side of plasma membrane side of membrane clathrin-coated pit endomembrane system membrane microdomain membrane raft plasma membrane raft plasma membrane region caveola extracellular region intracellular anatomical structure perinuclear region of cytoplasm cytoplasm cell cortex cortical cytoskeleton intracellular membraneless organelle intracellular organelle cytoskeleton organelle membraneless organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR016187	C-type lectin fold	Homologous Superfamily
A	IPR001304	C-type lectin-like	Domain
A	IPR016186	C-type lectin-like/link domain superfamily	Homologous Superfamily
A	IPR000436	Sushi/SCR/CCP domain	Domain
A	IPR000742	EGF-like domain	Domain
A	IPR002396	Selectin superfamily	Family
A	IPR035976	Sushi/SCR/CCP superfamily	Homologous Superfamily
A	IPR033991	Selectin, C-type lectin-like domain	Domain
A	IPR018378	C-type lectin, conserved site	Conserved Site

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	: P16581	atrial fibrillation Hypercholesterolemia atopic eczema brain ischemia hypertensive disorder allergic contact dermatitis cardiovascular disease multiple sclerosis coronary artery disease urticaria inborn carbohydrate metabolic disorder lung adenocarcinoma acne pancreatic ductal adenocarcinoma peripheral nervous system disease atrial fibrillation Hypercholesterolemia atopic eczema brain ischemia hypertensive disorder allergic contact dermatitis cardiovascular disease multiple sclerosis coronary artery disease urticaria inborn carbohydrate metabolic disorder lung adenocarcinoma acne pancreatic ductal adenocarcinoma peripheral nervous system disease psoriasis cerebrovascular disorder type 2 diabetes mellitus cutaneous lupus erythematosus vascular disease ductal breast carcinoma in situ familial atrial fibrillation interstitial cystitis lung cancer myocardial ischemia peripheral neuropathy congestive heart failure ulcerative colitis dermatitis, atopic head and neck cancer IgA glomerulonephritis ischemia reperfusion injury non-small cell lung carcinoma atherosclerosis periodontitis autoimmune disease thrombotic disease essential hypertension