Annotations: 8QA5

MTHFR + SAH asymmetric dis-inhibited state

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	zf-C2H2_16	e8qa5B1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: zf-C2H2_16	ECOD (v295.2)
A	zf-C2H2_16	e8qa5A1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: zf-C2H2_16	ECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF21895	MTHFR, SAM-binding regulatory domain (MTHFR_C)	MTHFR, SAM-binding regulatory domain	This is the C-terminal SAM-binding regulatory domain of 5,10-methylenetetrahydrofolate reductase (MTHFR) that follows the catalytic domain and is unique to eukaryotes. This domain provides the required interface for MTHFR homo-dimerization, thus posi ...	This is the C-terminal SAM-binding regulatory domain of 5,10-methylenetetrahydrofolate reductase (MTHFR) that follows the catalytic domain and is unique to eukaryotes. This domain provides the required interface for MTHFR homo-dimerization, thus positioning the N-terminal serine-rich phosphorylation region near the SAM-binding site. The core of this domain comprises two mixed beta-sheets, one of which flanked with helices. This regulatory domain represents distinct architecture from the classical SAM-dependent methyltransferases and non-methyltransferases [1].	Domain
A, B	PF02219	Methylenetetrahydrofolate reductase (MTHFR)	Methylenetetrahydrofolate reductase	This family includes the 5,10-methylenetetrahydrofolate reductase EC:1.7.99.5 from bacteria and methylenetetrahydrofolate reductase EC: 1.5.1.20 from eukaryotes. The structure for this domain is known [1] to be a TIM barrel.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Methylenetetrahydrofolate reductase (NADPH)	protein-containing complex binding binding FAD binding flavin adenine dinucleotide binding nucleoside phosphate binding ion binding anion binding nucleotide binding heterocyclic compound binding small molecule binding oxidoreductase activity oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor oxidoreductase activity, acting on the CH-NH group of donors methylenetetrahydrofolate reductase [NAD(P)H] activity protein-containing complex binding binding FAD binding flavin adenine dinucleotide binding nucleoside phosphate binding ion binding anion binding nucleotide binding heterocyclic compound binding small molecule binding oxidoreductase activity oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor oxidoreductase activity, acting on the CH-NH group of donors methylenetetrahydrofolate reductase [NAD(P)H] activity catalytic activity methylenetetrahydrofolate reductase (NADPH) activity modified amino acid binding	response to acid chemical response to stimulus response to chemical response to amino acid response to xenobiotic stimulus multicellular organismal process embryonic epithelial tube formation chordate embryonic development tube formation embryo development multicellular organism development epithelial tube formation tube morphogenesis primary neural tube formation response to acid chemical response to stimulus response to chemical response to amino acid response to xenobiotic stimulus multicellular organismal process embryonic epithelial tube formation chordate embryonic development tube formation embryo development multicellular organism development epithelial tube formation tube morphogenesis primary neural tube formation embryo development ending in birth or egg hatching anatomical structure development epithelial tube morphogenesis system development developmental process morphogenesis of embryonic epithelium epithelium development neural tube development tube development embryonic morphogenesis morphogenesis of an epithelium nervous system development tissue development anatomical structure morphogenesis tissue morphogenesis neural tube closure neural tube formation anatomical structure formation involved in morphogenesis tube closure animal gross anatomical part developmental process small molecule biosynthetic process oxoacid metabolic process sulfur amino acid metabolic process aspartate family amino acid biosynthetic process carboxylic acid metabolic process amino acid metabolic process primary metabolic process L-methionine metabolic process carboxylic acid biosynthetic process proteinogenic amino acid metabolic process amino acid biosynthetic process sulfur compound biosynthetic process biosynthetic process proteinogenic amino acid biosynthetic process small molecule metabolic process metabolic process cellular process sulfur compound metabolic process L-methionine biosynthetic process sulfur amino acid biosynthetic process homocysteine metabolic process non-proteinogenic amino acid metabolic process cellular component organization chromatin organization heterochromatin organization cellular component organization or biogenesis response to decreased oxygen levels response to hypoxia response to stress response to oxygen levels response to abiotic stimulus response to vitamin B2 response to nutrient levels response to nutrient response to oxygen-containing compound response to nitrogen compound response to vitamin S-adenosylmethionine metabolic process response to folic acid response to peptide response to cytokine response to interleukin-1 folic acid-containing compound biosynthetic process modified amino acid biosynthetic process modified amino acid metabolic process folic acid-containing compound metabolic process tetrahydrofolate interconversion pteridine-containing compound biosynthetic process tetrahydrofolate biosynthetic process pteridine-containing compound metabolic process tetrahydrofolate metabolic process one-carbon metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR004621	Methylenetetrahydrofolate reductase, catalytic domain, eukaryotes	Domain
A, B	IPR029041	FAD-linked oxidoreductase-like	Homologous Superfamily
A, B	IPR003171	Methylenetetrahydrofolate reductase-like, catalytic domain	Domain
A, B	IPR053806	MTHFR, SAM-binding regulatory domain	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B	: P42898	thrombophilia neural tube defect schizophrenia Down syndrome pulmonary embolism homocystinuria due to methylene tetrahydrofolate reductase deficiency rheumatoid arthritis spina bifida leukopenia Alzheimer disease Microvascular Angina homocystinuria hyperhomocysteinemia B-cell chronic lymphocytic leukemia follicular lymphoma thrombophilia neural tube defect schizophrenia Down syndrome pulmonary embolism homocystinuria due to methylene tetrahydrofolate reductase deficiency rheumatoid arthritis spina bifida leukopenia Alzheimer disease Microvascular Angina homocystinuria hyperhomocysteinemia B-cell chronic lymphocytic leukemia follicular lymphoma neutropenia thrombocytopenia vascular disease endogenous depression anencephaly Crohn disease spinal cord disease malignant colon neoplasm graft versus host disease cervical cancer thyrotoxicosis allergic disease myelomeningocele coronary restenosis male infertility neural tube defects, folate-sensitive inherited blood coagulation disorder bipolar disorder breast carcinoma tethered spinal cord syndrome diabetic peripheral angiopathy melancholia alopecia lymphoma urinary bladder cancer prostate cancer uterine cervix carcinoma in situ colorectal cancer anemia endometrial carcinoma nervous system disorder female infertility brain ischemia intracranial sinus thrombosis cardiovascular disease kidney disease cerebrovascular disorder hematologic disease liver disease clubfoot colorectal carcinoma inborn errors of metabolism reticulum cell sarcoma skin disease major depressive disorder autism benign colon neoplasm intellectual disability breast cancer non-Hodgkin lymphoma osteosarcoma peripheral nervous system disease leukoencephalopathy with vanishing white matter cleft lip colonic neoplasm drug-induced liver injury androgenetic alopecia endometrial cancer hypertensive disorder congenital heart disease inborn vitamin B12 deficiency Crohn's colitis neurotic disorder cystic fibrosis gastric cancer non-small cell lung carcinoma isolated anencephaly/exencephaly depressive disorder gastrointestinal mucositis ovarian cancer thrombophilia due to thrombin defect cervical intraepithelial neoplasia peripheral neuropathy digestive system disease hemochromatosis type 1 childhood acute lymphoblastic leukemia drug-induced hepatitis psoriasis myotonic dystrophy type 1 ileocolitis coronary artery disease lymphosarcoma atrial fibrillation craniorachischisis neurenteric cyst iniencephaly sudden sensorineural hearing loss acute kidney failure gastric neoplasm nutritional deficiency disease gastrointestinal stromal tumor pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia diastematomyelia thrombotic disease alopecia areata hemophilia B lung benign neoplasm urinary bladder neoplasm hereditary diffuse gastric adenocarcinoma