8Q7V

Structure of the recycling U5 snRNP bound to chaperones CD2BP2 and TSSC4 (State 1)


Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 5]U5 snRNA---
J [auth b]Small nuclear ribonucleoprotein-associated proteins B and B'
K [auth c]Small nuclear ribonucleoprotein Sm D2
L [auth d]Small nuclear ribonucleoprotein Sm D3
M [auth e]Small nuclear ribonucleoprotein E
N [auth f]Small nuclear ribonucleoprotein F
O [auth g]Small nuclear ribonucleoprotein G
B [auth A]Pre-mRNA-processing-splicing factor 8
C [auth B]U5 small nuclear ribonucleoprotein 200 kDa helicase
D [auth C]116 kDa U5 small nuclear ribonucleoprotein component
E [auth D]U5 small nuclear ribonucleoprotein 40 kDa protein
Pre-mRNA-processing factor 6
CD2 antigen cytoplasmic tail-binding protein 2
Protein TSSC4
I [auth a]Small nuclear ribonucleoprotein Sm D1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
J [auth b]IPR001163Sm domain, eukaryotic/archaea-typeDomain
J [auth b]IPR017131Small ribonucleoprotein associated, SmB/SmNFamily
J [auth b]IPR047575Sm domainDomain
J [auth b]IPR010920LSM domain superfamilyHomologous Superfamily
K [auth c]IPR001163Sm domain, eukaryotic/archaea-typeDomain
K [auth c]IPR047575Sm domainDomain
K [auth c]IPR027248Small nuclear ribonucleoprotein Sm D2Family
K [auth c]IPR010920LSM domain superfamilyHomologous Superfamily
L [auth d]IPR027141Like-Sm (LSM) domain containing protein, LSm4/SmD1/SmD3Family
L [auth d]IPR034099Small nuclear ribonucleoprotein Sm D3Family
L [auth d]IPR001163Sm domain, eukaryotic/archaea-typeDomain
L [auth d]IPR047575Sm domainDomain
L [auth d]IPR010920LSM domain superfamilyHomologous Superfamily
M [auth e]IPR027078Small nuclear ribonucleoprotein EFamily
M [auth e]IPR001163Sm domain, eukaryotic/archaea-typeDomain
M [auth e]IPR047575Sm domainDomain
M [auth e]IPR010920LSM domain superfamilyHomologous Superfamily
N [auth f]IPR016487Sm-like protein Lsm6/SmFFamily
N [auth f]IPR034100Small nuclear ribonucleoprotein FFamily
N [auth f]IPR001163Sm domain, eukaryotic/archaea-typeDomain
N [auth f]IPR047575Sm domainDomain
N [auth f]IPR010920LSM domain superfamilyHomologous Superfamily
O [auth g]IPR044641Sm-like protein Lsm7/SmGFamily
O [auth g]IPR034098Small nuclear ribonucleoprotein GFamily
O [auth g]IPR001163Sm domain, eukaryotic/archaea-typeDomain
O [auth g]IPR047575Sm domainDomain
O [auth g]IPR010920LSM domain superfamilyHomologous Superfamily
B [auth A]IPR012984PROCT domainDomain
B [auth A]IPR012591PRO8NT domainDomain
B [auth A]IPR019580Pre-mRNA-processing-splicing factor 8, U6-snRNA-bindingDomain
B [auth A]IPR027652Pre-mRNA-processing-splicing factor 8Family
B [auth A]IPR043172Prp8 RNase domain IV, palm regionHomologous Superfamily
B [auth A]IPR012592PROCN domainDomain
B [auth A]IPR012337Ribonuclease H-like superfamilyHomologous Superfamily
B [auth A]IPR043173Prp8 RNase domain IV, fingers regionHomologous Superfamily
B [auth A]IPR021983PRP8 domain IV coreDomain
B [auth A]IPR019581Pre-mRNA-processing-splicing factor 8, U5-snRNA-bindingDomain
B [auth A]IPR037518MPN domainDomain
B [auth A]IPR019582RNA recognition motif, spliceosomal PrP8Domain
B [auth A]IPR042516Pre-mRNA-processing-splicing factor 8, U5-snRNA-binding domain superfamilyHomologous Superfamily
B [auth A]IPR000555JAB1/MPN/MOV34 metalloenzyme domainDomain
C [auth B]IPR048863Pre-mRNA-splicing helicase BRR2-like, plug domainDomain
C [auth B]IPR041094Brr2, N-terminal helicase PWI domainDomain
C [auth B]IPR004179Sec63 domainDomain
C [auth B]IPR014756Immunoglobulin E-setHomologous Superfamily
C [auth B]IPR011545DEAD/DEAH box helicase domainDomain
C [auth B]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
C [auth B]IPR001650Helicase, C-terminal domain-likeDomain
C [auth B]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
C [auth B]IPR014001Helicase superfamily 1/2, ATP-binding domainDomain
C [auth B]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
C [auth B]IPR035892C2 domain superfamilyHomologous Superfamily
D [auth C]IPR005517Translation elongation factor EFG/EF2, domain IVDomain
D [auth C]IPR000795Translational (tr)-type GTP-binding domainDomain
D [auth C]IPR035647EF-G domain III/V-likeHomologous Superfamily
D [auth C]IPR035655116kDa U5 small nuclear ribonucleoprotein component, C-terminalDomain
D [auth C]IPR041095Elongation Factor G, domain IIDomain
D [auth C]IPR004161Translation elongation factor EFTu-like, domain 2Domain
D [auth C]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
D [auth C]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
D [auth C]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
D [auth C]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
D [auth C]IPR031950116kDa U5 small nuclear ribonucleoprotein component, N-terminalDomain
D [auth C]IPR000640Elongation factor EFG, domain V-likeDomain
D [auth C]IPR044121Snu114, GTP-binding domainDomain
D [auth C]IPR005225Small GTP-binding protein domainDomain
E [auth D]IPR019775WD40 repeat, conserved siteConserved Site
E [auth D]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
E [auth D]IPR001680WD40 repeatRepeat
E [auth D]IPR020472G-protein beta WD-40 repeatRepeat
E [auth D]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
IPR010491PRP1 splicing factor, N-terminalDomain
IPR003107HAT (Half-A-TPR) repeatRepeat
IPR045075Pre-mRNA-splicing factor Syf1-likeFamily
IPR019734Tetratricopeptide repeatRepeat
IPR003169GYF domainDomain
IPR035445GYF-like domain superfamilyHomologous Superfamily
IPR039905CD2 antigen cytoplasmic tail-binding protein 2/Lin1Family
IPR029338Tumour suppressing sub-chromosomal transferable candidate 4Family
I [auth a]IPR027141Like-Sm (LSM) domain containing protein, LSm4/SmD1/SmD3Family
I [auth a]IPR034102Small nuclear ribonucleoprotein D1Domain
I [auth a]IPR001163Sm domain, eukaryotic/archaea-typeDomain
I [auth a]IPR047575Sm domainDomain
I [auth a]IPR010920LSM domain superfamilyHomologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
J [auth b]PharosP14678
K [auth c]PharosP62316
L [auth d]PharosP62318
M [auth e]PharosP62304
N [auth f]PharosP62306
O [auth g]PharosP62308
B [auth A]PharosQ6P2Q9
C [auth B]PharosO75643
D [auth C]PharosQ15029
E [auth D]PharosQ96DI7
PharosO94906
PharosO95400
PharosQ9Y5U2
I [auth a]PharosP62314