8Q6T | pdb_00008q6t

Helical reconstruction of the relaxed thick filament from FIB milled left ventricular mouse myofibrils


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
U [auth V]zf-C2H2_16e8q6tV1 A: alpha arraysX: RNase A-likeH: RNase A-likeT: RNase A-likeF: zf-C2H2_16ECOD (v295.2)
Pzf-C2H2_16e8q6tP1 A: alpha arraysX: RNase A-likeH: RNase A-likeT: RNase A-likeF: zf-C2H2_16ECOD (v295.2)
Izf-C2H2_16e8q6tI1 A: alpha arraysX: RNase A-likeH: RNase A-likeT: RNase A-likeF: zf-C2H2_16ECOD (v295.2)
T [auth U]zf-C2H2_16e8q6tU1 A: alpha arraysX: RNase A-likeH: RNase A-likeT: RNase A-likeF: zf-C2H2_16ECOD (v295.2)
Mzf-C2H2_16e8q6tM1 A: alpha arraysX: RNase A-likeH: RNase A-likeT: RNase A-likeF: zf-C2H2_16ECOD (v295.2)
Lzf-C2H2_16e8q6tL1 A: alpha arraysX: RNase A-likeH: RNase A-likeT: RNase A-likeF: zf-C2H2_16ECOD (v295.2)
Gzf-C2H2_16e8q6tG1 A: alpha arraysX: RNase A-likeH: RNase A-likeT: RNase A-likeF: zf-C2H2_16ECOD (v295.2)
Fzf-C2H2_16e8q6tF1 A: alpha arraysX: RNase A-likeH: RNase A-likeT: RNase A-likeF: zf-C2H2_16ECOD (v295.2)
Ezf-C2H2_16e8q6tE1 A: alpha arraysX: RNase A-likeH: RNase A-likeT: RNase A-likeF: zf-C2H2_16ECOD (v295.2)
Szf-C2H2_16e8q6tS1 A: alpha arraysX: RNase A-likeH: RNase A-likeT: RNase A-likeF: zf-C2H2_16ECOD (v295.2)
Rzf-C2H2_16e8q6tR1 A: alpha arraysX: RNase A-likeH: RNase A-likeT: RNase A-likeF: zf-C2H2_16ECOD (v295.2)
Kzf-C2H2_16e8q6tK1 A: alpha arraysX: RNase A-likeH: RNase A-likeT: RNase A-likeF: zf-C2H2_16ECOD (v295.2)
Jzf-C2H2_16e8q6tJ1 A: alpha arraysX: RNase A-likeH: RNase A-likeT: RNase A-likeF: zf-C2H2_16ECOD (v295.2)
Dzf-C2H2_16e8q6tD1 A: alpha arraysX: RNase A-likeH: RNase A-likeT: RNase A-likeF: zf-C2H2_16ECOD (v295.2)
Czf-C2H2_16e8q6tC1 A: alpha arraysX: RNase A-likeH: RNase A-likeT: RNase A-likeF: zf-C2H2_16ECOD (v295.2)
QDNA_topoisoIVe8q6tQ1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: DNA_topoisoIVECOD (v295.2)
ODNA_topoisoIVe8q6tO1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: DNA_topoisoIVECOD (v295.2)
NDNA_topoisoIVe8q6tN1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: DNA_topoisoIVECOD (v295.2)
HDNA_topoisoIVe8q6tH1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: DNA_topoisoIVECOD (v295.2)
BDNA_topoisoIVe8q6tB1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: DNA_topoisoIVECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
U [auth V]PF00041Fibronectin type III domain (fn3)Fibronectin type III domainDomain
U [auth V]PF07679Immunoglobulin I-set domain (I-set)Immunoglobulin I-set domainDomain
I, P
PF00041Fibronectin type III domain (fn3)Fibronectin type III domainDomain
I, P
PF07679Immunoglobulin I-set domain (I-set)Immunoglobulin I-set domainDomain
E,
F,
G,
L,
M,
PF13499EF-hand domain pair (EF-hand_7)EF-hand domain pairDomain
A, B, H, N, O
PF02736Myosin N-terminal SH3-like domain (Myosin_N)Myosin N-terminal SH3-like domainThis domain has an SH3-like fold. It is found at the N-terminus of many but not all myosins. The function of this domain is unknown. Domain
A, B, H, N, O
PF00063Myosin head (motor domain) (Myosin_head)Myosin head (motor domain)Domain
A, B, H, N, O
PF01576Myosin tail (Myosin_tail_1)Myosin tail- Coiled-coil

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
U [auth V]Myosin-binding protein C, cardiac-type
I, P
Titin
E,
F,
G,
L,
M,
Myosin regulatory light chain 2, ventricular/cardiac muscle isoform
C, D, J, K, R
Myosin light chain 3
A, B, H, N, O
Myosin-7

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
U [auth V]IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
U [auth V]IPR003598Immunoglobulin subtype 2Domain
U [auth V]IPR003961Fibronectin type IIIDomain
U [auth V]IPR050964Striated Muscle Structural and Regulatory ProteinFamily
U [auth V]IPR013783Immunoglobulin-like foldHomologous Superfamily
U [auth V]IPR040849MyBP-C, tri-helix bundle domainDomain
U [auth V]IPR003599Immunoglobulin domain subtypeDomain
U [auth V]IPR007110Immunoglobulin-like domainDomain
U [auth V]IPR013098Immunoglobulin I-setDomain
U [auth V]IPR036116Fibronectin type III superfamilyHomologous Superfamily
I, P
IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
I, P
IPR008266Tyrosine-protein kinase, active siteActive Site
I, P
IPR000719Protein kinase domainDomain
I, P
IPR013106Immunoglobulin V-set domainDomain
I, P
IPR003599Immunoglobulin domain subtypeDomain
I, P
IPR015129Titin, Z repeatRepeat
I, P
IPR013783Immunoglobulin-like foldHomologous Superfamily
I, P
IPR007110Immunoglobulin-like domainDomain
I, P
IPR004168PPAK motifRepeat
I, P
IPR003598Immunoglobulin subtype 2Domain
I, P
IPR040849MyBP-C, tri-helix bundle domainDomain
I, P
IPR013098Immunoglobulin I-setDomain
I, P
IPR003961Fibronectin type IIIDomain
I, P
IPR011009Protein kinase-like domain superfamilyHomologous Superfamily
I, P
IPR036116Fibronectin type III superfamilyHomologous Superfamily
E,
F,
G,
L,
M,
IPR002048EF-hand domainDomain
E,
F,
G,
L,
M,
IPR011992EF-hand domain pairHomologous Superfamily
E,
F,
G,
L,
M,
IPR050403Myosin regulatory light chainFamily
E,
F,
G,
L,
M,
IPR018247EF-Hand 1, calcium-binding siteBinding Site
C, D, J, K, R
IPR050230Calmodulin/Myosin light chain/Troponin C-likeFamily
C, D, J, K, R
IPR002048EF-hand domainDomain
C, D, J, K, R
IPR011992EF-hand domain pairHomologous Superfamily
A, B, H, N, O
IPR036961Kinesin motor domain superfamilyHomologous Superfamily
A, B, H, N, O
IPR001609Myosin head, motor domain-likeDomain
A, B, H, N, O
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
A, B, H, N, O
IPR004009Myosin, SH3 domainDomain
A, B, H, N, O
IPR014751DNA repair protein XRCC4-like, C-terminalHomologous Superfamily
A, B, H, N, O
IPR002928Myosin tailDomain
A, B, H, N, O
IPR008989Myosin S1 fragment, N-terminalHomologous Superfamily