8Q5I

Structure of Candida albicans 80S ribosome in complex with cephaeline


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
E [auth j]PF00181e8q5ij2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00181ECOD (1.6)
E [auth j]PF03947e8q5ij1 A: beta barrelsX: SH3H: SH3T: SH3F: PF03947ECOD (1.6)
F [auth k]PF00297e8q5ik1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF00297ECOD (1.6)
G [auth l]PF00573e8q5il2 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: PF00573ECOD (1.6)
G [auth l]PF14374e8q5il1 A: extended segmentsX: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)H: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)T: C-terminal helical region in 60S ribosomal protein L4 (L4p)F: PF14374ECOD (1.6)
H [auth m]PF14204,PF17144e8q5im1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF14204,PF17144ECOD (1.6)
I [auth n]PF01159e8q5in1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01159ECOD (1.6)
J [auth o]PF00327,PF08079e8q5io1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: PF00327,PF08079ECOD (1.6)
K [auth p]PF01248e8q5ip1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
L [auth q]PF00347e8q5iq1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: PF00347ECOD (1.6)
M [auth r]PF00252e8q5ir1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: PF00252ECOD (1.6)
N [auth s]PF00281,PF00673e8q5is1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: PF00281,PF00673ECOD (1.6)
O [auth t]PF01294e8q5it1 A: extended segmentsX: RPL13 (From Topology)H: RPL13 (From Topology)T: RPL13F: PF01294ECOD (1.6)
P [auth u]PF01929e8q5iu1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01929ECOD (1.6)
Q [auth v]PF00827e8q5iv1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00827ECOD (1.6)
R [auth w]PF00572e8q5iw1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: PF00572ECOD (1.6)
S [auth x]PF00237e8q5ix1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: PF00237ECOD (1.6)
T [auth y]PF17135e8q5iy1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF17135ECOD (1.6)
U [auth z]PF01280e8q5iz1 A: alpha arraysX: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) N-terminal domainF: PF01280ECOD (1.6)
U [auth z]PF01280e8q5iz2 A: alpha bundlesX: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) C-terminal domainF: PF01280ECOD (1.6)
V [auth 0]F_UNCLASSIFIEDe8q5i01 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: F_UNCLASSIFIEDECOD (1.6)
V [auth 0]PF01775e8q5i02 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: PF01775ECOD (1.6)
W [auth 2]PF01157e8q5i21 A: beta barrelsX: SH3H: SH3T: SH3F: PF01157ECOD (1.6)
X [auth 5]PF01776e8q5i51 A: a+b two layersX: Ribosomal protein L22e (From Topology)H: Ribosomal protein L22e (From Topology)T: Ribosomal protein L22eF: PF01776ECOD (1.6)
Y [auth 6]PF00238e8q5i61 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF00238ECOD (1.6)
Z [auth 7]PF01246e8q5i71 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF01246ECOD (1.6)
AA [auth 8]PF00276,PF03939e8q5i81 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00276,PF03939ECOD (1.6)
BA [auth 9]PF16906e8q5i91 A: beta barrelsX: SH3H: SH3T: SH3F: PF16906ECOD (1.6)
CA [auth AA]PF01777e8q5iAA1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01777ECOD (1.6)
DA [auth AB]PF00828e8q5iAB1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF00828ECOD (1.6)
EA [auth AC]PF01779e8q5iAC1 A: extended segmentsX: RPL29 (From Topology)H: RPL29 (From Topology)T: RPL29F: PF01779ECOD (1.6)
FA [auth AD]PF01248e8q5iAD1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
GA [auth AE]PF01198e8q5iAE1 A: a+b two layersX: Ribosomal protein L31e-likeH: Ribosomal protein L31e/gp120 outer domain (From Topology)T: Ribosomal protein L31e/gp120 outer domainF: PF01198ECOD (1.6)
HA [auth AF]PF01655e8q5iAF1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L32e (From Topology)T: Ribosomal protein L32eF: PF01655ECOD (1.6)
IA [auth AG]PF01247e8q5iAG1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF01247ECOD (1.6)
JA [auth AH]PF01199e8q5iAH1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: RPL34 (From Topology)T: RPL34F: PF01199ECOD (1.6)
KA [auth AI]PF00831e8q5iAI1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: PF00831ECOD (1.6)
LA [auth AJ]PF01158e8q5iAJ1 A: alpha arraysX: 60S ribosomal protein rpL36 (L36e) (From Topology)H: 60S ribosomal protein rpL36 (L36e) (From Topology)T: 60S ribosomal protein rpL36 (L36e)F: PF01158ECOD (1.6)
MA [auth AK]PF01907e8q5iAK1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01907ECOD (1.6)
NA [auth AL]PF01781e8q5iAL1 A: a+b two layersX: SRP9/14-likeH: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)T: Signal recognition particle alu RNA binding heterodimer SRP9/14-relatedF: PF01781ECOD (1.6)
OA [auth AM]PF00832e8q5iAM1 A: extended segmentsX: Ribosomal protein L39e (From Topology)H: Ribosomal protein L39e (From Topology)T: Ribosomal protein L39eF: PF00832ECOD (1.6)
PA [auth AN]PF01020e8q5iAN1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01020ECOD (1.6)
QA [auth AO]PF05162e8q5iAO1 A: extended segmentsX: Ribosomal protein L41-A (From Topology)H: Ribosomal protein L41-A (From Topology)T: Ribosomal protein L41-AF: PF05162ECOD (1.6)
RA [auth AP]PF00935e8q5iAP1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF00935ECOD (1.6)
SA [auth AQ]PF01780e8q5iAQ1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01780ECOD (1.6)
UA [auth B]PF00318e8q5iB1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: PF00318ECOD (1.6)
VA [auth C]PF01015e8q5iC2 A: beta barrelsX: Ribosomal protein L25-likeH: 40S ribosomal protein S3A N-terminal domain (From Topology)T: 40S ribosomal protein S3A N-terminal domainF: PF01015ECOD (1.6)
VA [auth C]PF01015e8q5iC1 A: a+b two layersX: T-foldH: 40S ribosomal protein S3A C-terminal domain (From Topology)T: 40S ribosomal protein S3A C-terminal domainF: PF01015ECOD (1.6)
WA [auth D]PF03719e8q5iD2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF03719ECOD (1.6)
WA [auth D]PF00333e8q5iD3 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: PF00333ECOD (1.6)
WA [auth D]PF00333e8q5iD1 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: PF00333ECOD (1.6)
XA [auth E]PF00189e8q5iE2 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: PF00189ECOD (1.6)
XA [auth E]PF07650e8q5iE1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: PF07650ECOD (1.6)
YA [auth F]PF00900e8q5iF3 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00900ECOD (1.6)
YA [auth F]PF00467,PF16121e8q5iF2 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF16121ECOD (1.6)
YA [auth F]PF00900,PF01479,PF08071e8q5iF1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: PF00900,PF01479,PF08071ECOD (1.6)
ZA [auth G]PF00177e8q5iG1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: PF00177ECOD (1.6)
AB [auth H]PF01092e8q5iH1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: PF01092ECOD (1.6)
BB [auth I]PF01251e8q5iI1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: PF01251ECOD (1.6)
CB [auth J]PF01201e8q5iJ1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF01201ECOD (1.6)
DB [auth K]PF00163,PF01479e8q5iK1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: PF00163,PF01479ECOD (1.6)
EB [auth L]PF03501e8q5iL1 A: alpha arraysX: HTHH: HTHT: wingedF: PF03501ECOD (1.6)
FB [auth M]PF00366,PF16205e8q5iM1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00366,PF16205ECOD (1.6)
GB [auth O]PF08069e8q5iO1 A: alpha arraysX: HTHH: 40S ribosomal protein S13 N-terminal domain (From Topology)T: 40S ribosomal protein S13 N-terminal domainF: PF08069ECOD (1.6)
GB [auth O]PF00312e8q5iO2 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: PF00312ECOD (1.6)
HB [auth P]PF00411e8q5iP1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00411ECOD (1.6)
IB [auth Q]PF00203e8q5iQ1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: PF00203ECOD (1.6)
JB [auth R]PF00380e8q5iR1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF00380ECOD (1.6)
KB [auth S]PF00833e8q5iS1 A: alpha arraysX: HTHH: HTHT: FF domainF: PF00833ECOD (1.6)
LB [auth T]PF00416e8q5iT1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: PF00416ECOD (1.6)
MB [auth U]PF01090e8q5iU1 A: alpha arraysX: HTHH: HTHT: wingedF: PF01090ECOD (1.6)
NB [auth V]PF00338e8q5iV1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: PF00338ECOD (1.6)
OB [auth W]PF01249e8q5iW1 A: a+b two layersX: 40S ribosomal protein rpS21 (S21e) (From Topology)H: 40S ribosomal protein rpS21 (S21e) (From Topology)T: 40S ribosomal protein rpS21 (S21e)F: PF01249ECOD (1.6)
PB [auth X]PF00410e8q5iX1 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: PF00410ECOD (1.6)
PB [auth X]PF00410e8q5iX2 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: PF00410ECOD (1.6)
QB [auth Y]PF00164e8q5iY1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00164ECOD (1.6)
RB [auth Z]PF01282e8q5iZ1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF01282ECOD (1.6)
SB [auth b]PF01283e8q5ib1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF01283ECOD (1.6)
TB [auth c]PF01667e8q5ic1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01667ECOD (1.6)
UB [auth d]PF01200e8q5id1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF01200ECOD (1.6)
VB [auth e]PF00253e8q5ie1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF00253ECOD (1.6)
WB [auth f]PF04758e8q5if1 A: extended segmentsX: 40S ribosomal protein S30 (S30e) (From Topology)H: 40S ribosomal protein S30 (S30e) (From Topology)T: 40S ribosomal protein S30 (S30e)F: PF04758ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
V [auth 0]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A.Domain
Y [auth 6]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
Z [auth 7]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24e- Domain
AA [auth 8]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
BA [auth 9]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
CA [auth AA]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
DA [auth AB]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
EA [auth AC]PF01779Ribosomal L29e protein family (Ribosomal_L29e)Ribosomal L29e protein family- Family
GA [auth AE]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
HA [auth AF]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
IA [auth AG]PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35Ae- Domain
KA [auth AI]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
LA [auth AJ]PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
MA [auth AK]PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
NA [auth AL]PF01781Ribosomal L38e protein family (Ribosomal_L38e)Ribosomal L38e protein family- Family
OA [auth AM]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
PA [auth AN]PF01020Ribosomal L40e family (Ribosomal_L40e)Ribosomal L40e family- Family
QA [auth AO]PF05162Ribosomal protein L41 (Ribosomal_L41)Ribosomal protein L41- Family
RA [auth AP]PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
SA [auth AQ]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
UA [auth B]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
VA [auth C]PF01667Ribosomal protein S27 (Ribosomal_S27e)Ribosomal protein S27- Family
WA [auth D]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
WA [auth D]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
XA [auth E]PF07650KH domain (KH_2)KH domain- Domain
XA [auth E]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
XA [auth E]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
YA [auth F]PF00900Ribosomal family S4e (Ribosomal_S4e)Ribosomal family S4e- Family
YA [auth F]PF1612140S ribosomal protein S4 C-terminus (40S_S4_C)40S ribosomal protein S4 C-terminus- Family
YA [auth F]PF08071RS4NT (NUC023) domain (RS4NT)RS4NT (NUC023) domainThis is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1].Domain
YA [auth F]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
YA [auth F]PF00467KOW motif (KOW)KOW motif- Family
ZA [auth G]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
AB [auth H]PF01092Ribosomal protein S6e (Ribosomal_S6e)Ribosomal protein S6e- Family
BB [auth I]PF01251Ribosomal protein S7e (Ribosomal_S7e)Ribosomal protein S7e- Family
CB [auth J]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
CB [auth J]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
CB [auth J]PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family
DB [auth K]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
DB [auth K]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
EB [auth L]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
EB [auth L]PF03501Plectin/S10 domain (S10_plectin)Plectin/S10 domainThis presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding.Domain
FB [auth M]PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
FB [auth M]PF16205Ribosomal_S17 N-terminal (Ribosomal_S17_N)Ribosomal_S17 N-terminal- Family
FB [auth M]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
GB [auth O]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
GB [auth O]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
HB [auth P]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
HB [auth P]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
IB [auth Q]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
IB [auth Q]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
JB [auth R]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
JB [auth R]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
KB [auth S]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
KB [auth S]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
LB [auth T]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
LB [auth T]PF01294Ribosomal protein L13e (Ribosomal_L13e)Ribosomal protein L13e- Family
MB [auth U]PF01090Ribosomal protein S19e (Ribosomal_S19e)Ribosomal protein S19e- Family
MB [auth U]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
NB [auth V]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
NB [auth V]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
OB [auth W]PF01249Ribosomal protein S21e (Ribosomal_S21e)Ribosomal protein S21e- Family
OB [auth W]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
PB [auth X]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
PB [auth X]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
QB [auth Y]PF17135Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)Ribosomal protein 60S L18 and 50S L18e- Family
QB [auth Y]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
RB [auth Z]PF01280Ribosomal protein L19e (Ribosomal_L19e)Ribosomal protein L19e- Family
RB [auth Z]PF01282Ribosomal protein S24e (Ribosomal_S24e)Ribosomal protein S24e- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 1]25S rRNA---
B [auth 3]5S---
C [auth 4]5.8S rRNA---
D [auth 10]Mixture of endogenous E-tRNAs---
E [auth j]60S ribosomal protein L2-B
F [auth k]60S ribosomal protein L3
G [auth l]60S ribosomal protein L4-B
H [auth m]60S ribosomal protein L5
I [auth n]60S ribosomal protein L6
J [auth o]60S ribosomal protein L7-A
K [auth p]60S ribosomal protein L8
L [auth q]60S ribosomal protein L9-B
M [auth r]60S ribosomal protein L10
N [auth s]60S ribosomal protein L11-B
O [auth t]60S ribosomal protein L13
P [auth u]60S ribosomal protein L14-B
Q [auth v]60S ribosomal protein L15-A
R [auth w]Ribosomal protein L13
S [auth x]Ribosomal protein L22
T [auth y]60S ribosomal protein L18-A
U [auth z]60S ribosomal protein L19-A
V [auth 0]60S ribosomal protein L20
W [auth 2]60S ribosomal protein L21-A
X [auth 5]60S ribosomal protein L22-B
Y [auth 6]60S ribosomal protein L23-A
Z [auth 7]60S ribosomal protein L24-A
AA [auth 8]60S ribosomal protein L25
BA [auth 9]Ribosomal protein L24
CA [auth AA]60S ribosomal protein L27
DA [auth AB]60S ribosomal protein L28
EA [auth AC]60S ribosomal protein L29
FA [auth AD]60S ribosomal protein L30
GA [auth AE]60S ribosomal protein L31-B
HA [auth AF]60S ribosomal protein L32
IA [auth AG]60S ribosomal protein L33-A
JA [auth AH]60S ribosomal protein L34-B
KA [auth AI]Ribosomal protein L29
LA [auth AJ]60S ribosomal protein L36
MA [auth AK]60S ribosomal protein L37-B
NA [auth AL]60S ribosomal protein L38
OA [auth AM]60S ribosomal protein L39
PA [auth AN]60S ribosomal protein L40-B
QA [auth AO]60S ribosomal protein L41
RA [auth AP]60S ribosomal protein L42-B
SA [auth AQ]60S ribosomal protein L43-A
TA [auth A]18S ribosomal RNA---
UA [auth B]40S ribosomal protein S0
VA [auth C]40S ribosomal protein S1
WA [auth D]Ribosomal protein S5
XA [auth E]Ribosomal protein S3
YA [auth F]40S ribosomal protein S4
ZA [auth G]Ribosomal protein S7
AB [auth H]40S ribosomal protein S6
BB [auth I]40S ribosomal protein S7
CB [auth J]40S ribosomal protein S8
DB [auth K]Ribosomal protein S4
EB [auth L]40S ribosomal protein S10-A -
FB [auth M]40S ribosomal protein S11A
GB [auth O]40S ribosomal protein S13
HB [auth P]40S ribosomal protein S14-A
IB [auth Q]40S ribosomal protein S15
JB [auth R]40S ribosomal protein S16
KB [auth S]40S ribosomal protein S17-B
LB [auth T]40S ribosomal protein S18-B
MB [auth U]40S ribosomal protein S19-A
NB [auth V]Ribosomal protein S10
OB [auth W]40S ribosomal protein S21
PB [auth X]40S ribosomal protein S22-A
QB [auth Y]Ribosomal protein S23 (S12)
RB [auth Z]40S ribosomal protein S24
SB [auth b]40S ribosomal protein S26
TB [auth c]40S ribosomal protein S27
UB [auth d]40S ribosomal protein S28-B
VB [auth e]40S ribosomal protein S29A
WB [auth f]40S ribosomal protein S30
XB [auth g]DNA (5'-R(P*GP*GP*CP*AP*G)-3')---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
E [auth j]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
E [auth j]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
E [auth j]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
E [auth j]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
E [auth j]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
E [auth j]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
E [auth j]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
E [auth j]IPR002171Large ribosomal subunit protein uL2Family
F [auth k]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
F [auth k]IPR045077Large ribosomal subunit protein uL3, archaeal/eukaryotic-typeFamily
F [auth k]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
F [auth k]IPR000597Large ribosomal subunit protein uL3Family
F [auth k]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
G [auth l]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
G [auth l]IPR002136Large ribosomal subunit protein uL4Family
G [auth l]IPR013000Large ribosomal subunit protein uL4, eukaryotic/archaeal, conserved siteConserved Site
G [auth l]IPR045240Large ribosomal subunit protein uL4, eukaryotic and archaeal typeFamily
G [auth l]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
H [auth m]IPR005485Large ribosomal subunit protein uL18 eukaryotic/archaealFamily
H [auth m]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
I [auth n]IPR049633Large ribosomal subunit protein eL6, conserved siteConserved Site
I [auth n]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
I [auth n]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
I [auth n]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
I [auth n]IPR000915Large ribosomal subunit protein eL6Family
J [auth o]IPR035808Large ribosomal subunit protein uL30, eukaryotic/archaealDomain
J [auth o]IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotesDomain
J [auth o]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
J [auth o]IPR039699Large ribosomal subunit protein uL30Family
J [auth o]IPR005998Large ribosomal subunit protein uL30, eukaryoticFamily
J [auth o]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
K [auth p]IPR001921Large ribosomal subunit protein eL8Family
K [auth p]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
K [auth p]IPR004037Large ribosomal subunit protein eL8-like, conserved siteConserved Site
K [auth p]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
K [auth p]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
L [auth q]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
L [auth q]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
L [auth q]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
L [auth q]IPR000702Large ribosomal subunit protein uL6-likeFamily
M [auth r]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
M [auth r]IPR001197Large ribosomal subunit protein uL16, eukaryotes/archaeaFamily
M [auth r]IPR016180Large ribosomal subunit protein uL16 domainDomain
M [auth r]IPR047873Large ribosomal subunit protein uL16Family
M [auth r]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryotes/archaeaConserved Site
N [auth s]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
N [auth s]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
N [auth s]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
N [auth s]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
N [auth s]IPR002132Large ribosomal subunit protein uL5Family
O [auth t]IPR001380Large ribosomal subunit protein eL13Family
O [auth t]IPR018256Large ribosomal subunit protein eL13, conserved siteConserved Site
P [auth u]IPR039660Large ribosomal subunit protein eL14Family
P [auth u]IPR041985Large ribosomal subunit protein eL14, KOW motifDomain
P [auth u]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
P [auth u]IPR002784Large ribosomal subunit protein eL14 domainDomain
P [auth u]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
Q [auth v]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
Q [auth v]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
Q [auth v]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
Q [auth v]IPR000439Large ribosomal subunit protein eL15Family
R [auth w]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
R [auth w]IPR005822Large ribosomal subunit protein uL13Family
R [auth w]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
R [auth w]IPR005755Large ribosomal subunit protein uL13, eukaryotic/archaealFamily
S [auth x]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
S [auth x]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
S [auth x]IPR001063Large ribosomal subunit protein uL22Family
S [auth x]IPR005721Large ribosomal subunit protein uL22, eukaryotic/archaealFamily
T [auth y]IPR021131Large ribosomal subunit protein uL15/eL18Domain
T [auth y]IPR021132Large ribosomal subunit protein eL18, conserved siteConserved Site
T [auth y]IPR000039Large ribosomal subunit protein eL18Family
T [auth y]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
U [auth z]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
U [auth z]IPR039547Large ribosomal subunit protein eL19Family
U [auth z]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
U [auth z]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
U [auth z]IPR000196Large ribosomal subunit protein eL19 domainDomain
U [auth z]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
V [auth 0]IPR028877Large ribosomal subunit protein eL20Family
V [auth 0]IPR023573Large ribosomal subunit protein eL20 domainDomain
V [auth 0]IPR021138Large ribosomal subunit protein eL20, eukaryotesFamily
W [auth 2]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
W [auth 2]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
W [auth 2]IPR001147Large ribosomal subunit protein eL21Family
W [auth 2]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
X [auth 5]IPR002671Large ribosomal subunit protein eL22Family
X [auth 5]IPR038526Large ribosomal subunit protein eL22 superfamilyHomologous Superfamily
Y [auth 6]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
Y [auth 6]IPR000218Large ribosomal subunit protein uL14Family
Y [auth 6]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
Z [auth 7]IPR000988Large ribosomal subunit protein eL24-relatedFamily
Z [auth 7]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
Z [auth 7]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
AA [auth 8]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
AA [auth 8]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
AA [auth 8]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
AA [auth 8]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
AA [auth 8]IPR013025Large ribosomal subunit protein uL23-likeFamily
BA [auth 9]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
BA [auth 9]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
BA [auth 9]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
BA [auth 9]IPR005756Large ribosomal subunit protein uL24, eukaryotic/archaealFamily
BA [auth 9]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
CA [auth AA]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
CA [auth AA]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
CA [auth AA]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
CA [auth AA]IPR001141Large ribosomal subunit protein eL27Family
CA [auth AA]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
DA [auth AB]IPR021131Large ribosomal subunit protein uL15/eL18Domain
DA [auth AB]IPR030878Large ribosomal subunit protein uL15Family
DA [auth AB]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
DA [auth AB]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
EA [auth AC]IPR002673Large ribosomal subunit protein eL29Family
FA [auth AD]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
FA [auth AD]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
FA [auth AD]IPR039109Large ribosomal subunit protein eL30-likeFamily
FA [auth AD]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
GA [auth AE]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
GA [auth AE]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
GA [auth AE]IPR000054Large ribosomal subunit protein eL31Family
HA [auth AF]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
HA [auth AF]IPR001515Large ribosomal subunit protein eL32Family
HA [auth AF]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
IA [auth AG]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
IA [auth AG]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
IA [auth AG]IPR001780Large ribosomal subunit protein eL33Family
IA [auth AG]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
JA [auth AH]IPR008195Large ribosomal subunit protein eL34Family
JA [auth AH]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
KA [auth AI]IPR045059Large ribosomal subunit protein uL29, eukaryotesFamily
KA [auth AI]IPR001854Large ribosomal subunit protein uL29Family
KA [auth AI]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
LA [auth AJ]IPR000509Large ribosomal subunit protein eL36Family
LA [auth AJ]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
MA [auth AK]IPR001569Large ribosomal subunit protein eL37Family
MA [auth AK]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
MA [auth AK]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
MA [auth AK]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
NA [auth AL]IPR002675Large ribosomal subunit protein eL38Family
NA [auth AL]IPR038464Large ribosomal subunit protein eL38 superfamilyHomologous Superfamily
OA [auth AM]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
OA [auth AM]IPR000077Large ribosomal subunit protein eL39Family
OA [auth AM]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
PA [auth AN]IPR001975Large ribosomal subunit protein eL40 domainDomain
PA [auth AN]IPR038587Large ribosomal subunit protein eL40 superfamilyHomologous Superfamily
PA [auth AN]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
QA [auth AO]IPR007836Large ribosomal subunit protein eS32Family
RA [auth AP]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
RA [auth AP]IPR000552Large ribosomal subunit protein eL42Family
SA [auth AQ]IPR002674Large ribosomal subunit protein eL43Family
SA [auth AQ]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
SA [auth AQ]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
UA [auth B]IPR005707Small ribosomal subunit protein uS2, eukaryotic/archaealFamily
UA [auth B]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
UA [auth B]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
UA [auth B]IPR001865Small ribosomal subunit protein uS2Family
UA [auth B]IPR027498Small ribosomal subunit protein uS2, eukaryoticFamily
VA [auth C]IPR001593Small ribosomal subunit protein eS1Family
VA [auth C]IPR018281Small ribosomal subunit protein eS1, conserved siteConserved Site
VA [auth C]IPR027500Small ribosomal subunit protein eS1, eukaryotesFamily
WA [auth D]IPR000851Small ribosomal subunit protein uS5Family
WA [auth D]IPR005711Small ribosomal subunit protein uS5, eukaryotic/archaealFamily
WA [auth D]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
WA [auth D]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
WA [auth D]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
WA [auth D]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
WA [auth D]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
XA [auth E]IPR004044K Homology domain, type 2Domain
XA [auth E]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
XA [auth E]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
XA [auth E]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
XA [auth E]IPR005703Small ribosomal subunit protein uS3, eukaryotic/archaealFamily
XA [auth E]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
YA [auth F]IPR018199Small ribosomal subunit protein eS4, N-terminal, conserved siteConserved Site
YA [auth F]IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
YA [auth F]IPR032277Small ribosomal subunit protein eS4, C-terminal domainDomain
YA [auth F]IPR002942RNA-binding S4 domainDomain
YA [auth F]IPR013845Small ribosomal subunit protein eS4, central regionDomain
YA [auth F]IPR000876Small ribosomal subunit protein eS4Family
YA [auth F]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
YA [auth F]IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
YA [auth F]IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
YA [auth F]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
YA [auth F]IPR005824KOWDomain
ZA [auth G]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
ZA [auth G]IPR000235Small ribosomal subunit protein uS7Family
ZA [auth G]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
ZA [auth G]IPR023798Small ribosomal subunit protein uS7 domainDomain
ZA [auth G]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
AB [auth H]IPR014401Small ribosomal subunit protein eS6-likeFamily
AB [auth H]IPR001377Small ribosomal subunit protein eS6Family
AB [auth H]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
BB [auth I]IPR000554Small ribosomal subunit protein eS7Family
BB [auth I]IPR047861Small ribosomal subunit protein eS7, conserved siteConserved Site
CB [auth J]IPR001047Small ribosomal subunit protein eS8Family
CB [auth J]IPR042563Small ribosomal subunit protein eS8 subdomain, eukaryotesHomologous Superfamily
CB [auth J]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
CB [auth J]IPR018283Small ribosomal subunit protein eS8, conserved siteConserved Site
DB [auth K]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
DB [auth K]IPR002942RNA-binding S4 domainDomain
DB [auth K]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
DB [auth K]IPR005710Small ribosomal subunit protein uS4, eukaryotic/archaealFamily
DB [auth K]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
DB [auth K]IPR022801Small ribosomal subunit protein uS4Family
EB [auth L]IPR037447Small ribosomal subunit protein eS10Family
EB [auth L]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
EB [auth L]IPR005326Plectin/eS10, N-terminalDomain
FB [auth M]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
FB [auth M]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
FB [auth M]IPR000266Small ribosomal subunit protein uS17Family
FB [auth M]IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
FB [auth M]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
GB [auth O]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
GB [auth O]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
GB [auth O]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotesFamily
GB [auth O]IPR000589Small ribosomal subunit protein uS15Family
HB [auth P]IPR001971Small ribosomal subunit protein uS11Family
HB [auth P]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
HB [auth P]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
IB [auth Q]IPR002222Small ribosomal subunit protein uS19Family
IB [auth Q]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
IB [auth Q]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
IB [auth Q]IPR005713Small ribosomal subunit protein uS19, eukaryotic/archaealFamily
JB [auth R]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
JB [auth R]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
JB [auth R]IPR000754Small ribosomal subunit protein uS9Family
JB [auth R]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
KB [auth S]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
KB [auth S]IPR001210Small ribosomal subunit protein eS17Family
KB [auth S]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
LB [auth T]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
LB [auth T]IPR001892Small ribosomal subunit protein uS13Family
LB [auth T]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
LB [auth T]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
MB [auth U]IPR001266Small ribosomal subunit protein eS19Family
MB [auth U]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
MB [auth U]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
NB [auth V]IPR001848Small ribosomal subunit protein uS10Family
NB [auth V]IPR027486Small ribosomal subunit protein uS10 domainDomain
NB [auth V]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
NB [auth V]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
NB [auth V]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
OB [auth W]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
OB [auth W]IPR018279Small ribosomal subunit protein eS21, conserved siteConserved Site
OB [auth W]IPR001931Small ribosomal subunit protein eS21Family
PB [auth X]IPR000630Small ribosomal subunit protein uS8Family
PB [auth X]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
PB [auth X]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
QB [auth Y]IPR006032Small ribosomal subunit protein uS12Family
QB [auth Y]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
QB [auth Y]IPR005680Small ribosomal subunit protein uS12, eukaryotic/archaealFamily
RB [auth Z]IPR001976Small ribosomal subunit protein eS24Family
RB [auth Z]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
RB [auth Z]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
SB [auth b]IPR038551Ribosomal protein eS26 superfamilyHomologous Superfamily
SB [auth b]IPR000892Small ribosomal subunit protein eS26Family
SB [auth b]IPR047864Ribosomal protein eS26, conserved siteConserved Site
TB [auth c]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
TB [auth c]IPR000592Small ribosomal subunit protein eS27Family
TB [auth c]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
UB [auth d]IPR028626Ribosomal protein eS28 conserved siteConserved Site
UB [auth d]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
UB [auth d]IPR000289Small ribosomal subunit protein eS28Family
VB [auth e]IPR001209Small ribosomal subunit protein uS14Family
VB [auth e]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
VB [auth e]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
VB [auth e]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
WB [auth f]IPR006846Small ribosomal subunit protein eS30Family

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
A [auth 1]OMC Parent Component: C

A [auth 1]OMG Parent Component: G

Y [auth 6]MLZ Parent Component: LYS

RESIDAA0076

PSI-MOD :  N6-methyl-L-lysine MOD:00085
RA [auth AP]MLZ Parent Component: LYS

RESIDAA0076 , AA0076

PSI-MOD :  N6-methyl-L-lysine MOD:00085 , N6-methyl-L-lysine MOD:00085
HB [auth P]IAS RESIDAA0076 , AA0076