III2-IV1 respiratory supercomplex from S. pombe
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| I | HIG_1_N | e8q1bI1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: HIG_1_N | ECOD (v294.1) |
| S [auth T] | HIG_1_N | e8q1bT1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: HIG_1_N | ECOD (v294.1) |
| H | HIG_1_N | e8q1bH1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: HIG_1_N | ECOD (v294.1) |
| R [auth S] | HIG_1_N | e8q1bS1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: HIG_1_N | ECOD (v294.1) |
| G | HIG_1_N | e8q1bG1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: HIG_1_N | ECOD (v294.1) |
| Q [auth R] | HIG_1_N | e8q1bR1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: HIG_1_N | ECOD (v294.1) |
| F | HIG_1_N | e8q1bF1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: HIG_1_N | ECOD (v294.1) |
| P [auth Q] | HIG_1_N | e8q1bQ1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: HIG_1_N | ECOD (v294.1) |
| E | HIG_1_N | e8q1bE2 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: HIG_1_N | ECOD (v294.1) |
| O [auth P] | HIG_1_N | e8q1bP1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: HIG_1_N | ECOD (v294.1) |
| D | HIG_1_N | e8q1bD1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: HIG_1_N | ECOD (v294.1) |
| N [auth O] | HIG_1_N | e8q1bO1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: HIG_1_N | ECOD (v294.1) |
| C | HIG_1_N | e8q1bC1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: HIG_1_N | ECOD (v294.1) |
| M [auth N] | HIG_1_N | e8q1bN1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: HIG_1_N | ECOD (v294.1) |
| FA [auth l] | HIG_1_N | e8q1bl1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: HIG_1_N | ECOD (v294.1) |
| EA [auth k] | HIG_1_N | e8q1bk1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: HIG_1_N | ECOD (v294.1) |
| DA [auth j] | HIG_1_N | e8q1bj1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: HIG_1_N | ECOD (v294.1) |
| B | HIG_1_N | e8q1bB1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: HIG_1_N | ECOD (v294.1) |
| L [auth M] | HIG_1_N | e8q1bM1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: HIG_1_N | ECOD (v294.1) |
| BA [auth h] | HIG_1_N | e8q1bh1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: HIG_1_N | ECOD (v294.1) |
| AA [auth g] | HIG_1_N | e8q1bg1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: HIG_1_N | ECOD (v294.1) |
| Z [auth f] | HIG_1_N | e8q1bf1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: HIG_1_N | ECOD (v294.1) |
| Y [auth e] | HIG_1_N | e8q1be1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: HIG_1_N | ECOD (v294.1) |
| X [auth d] | HIG_1_N | e8q1bd1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: HIG_1_N | ECOD (v294.1) |
| W [auth c] | HIG_1_N | e8q1bc1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: HIG_1_N | ECOD (v294.1) |
| V [auth b] | HIG_1_N | e8q1bb1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: HIG_1_N | ECOD (v294.1) |
| U [auth a] | HIG_1_N | e8q1ba1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: HIG_1_N | ECOD (v294.1) |
| J | HIG_1_N | e8q1bJ1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: HIG_1_N | ECOD (v294.1) |
| T [auth U] | HIG_1_N | e8q1bU1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: HIG_1_N | ECOD (v294.1) |
| A | HIG_1_N | e8q1bA1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: HIG_1_N | ECOD (v294.1) |
| K [auth L] | HIG_1_N | e8q1bL1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: HIG_1_N | ECOD (v294.1) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| I, S [auth T] | PF05365 | Cytochrome b-c1 complex subunit 9 (UCR_UQCRX_QCR9) | Cytochrome b-c1 complex subunit 9 | - | Family |
| H, R [auth S] | PF02939 | UcrQ family (UcrQ) | UcrQ family | - | Family |
| G, Q [auth R] | PF02271 | Ubiquinol-cytochrome C reductase complex 14kD subunit (UCR_14kD) | Ubiquinol-cytochrome C reductase complex 14kD subunit | - | Family |
| G, Q [auth R] | PF02238 | Cytochrome c oxidase subunit VII (COX7a) | Cytochrome c oxidase subunit VII | - | Family |
| F, P [auth Q] | PF02284 | Cytochrome c oxidase subunit Va (COX5A) | Cytochrome c oxidase subunit Va | Cytochrome c oxidase, a 13 sub-unit complex, EC:1.9.3.1 is the terminal oxidase in the mitochondrial electron transport chain. This family is composed of cytochrome c oxidase subunit Va. | Domain |
| E, O [auth P] | PF02936 | Cytochrome c oxidase subunit IV (COX4) | Cytochrome c oxidase subunit IV | - | Family |
| E, O [auth P] | PF00355 | Rieske [2Fe-2S] domain (Rieske) | Rieske [2Fe-2S] domain | The rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in ... | Domain |
| D, N [auth O] | PF02167 | Cytochrome C1 family (Cytochrom_C1) | Cytochrome C1 family | - | Family |
| C, M [auth N] | PF00032 | Cytochrome b(C-terminal)/b6/petD (Cytochrom_B_C) | Cytochrome b(C-terminal)/b6/petD | Domain | |
| C, M [auth N] | PF00033 | Cytochrome b/b6/petB (Cytochrome_B) | Cytochrome b/b6/petB | Domain | |
| C, M [auth N] | PF00510 | Cytochrome c oxidase subunit III (COX3) | Cytochrome c oxidase subunit III | Domain | |
| B, L [auth M] | PF00116 | Cytochrome C oxidase subunit II, periplasmic domain (COX2) | Cytochrome C oxidase subunit II, periplasmic domain | Domain | |
| B, L [auth M] | PF05193 | Peptidase M16 inactive domain (Peptidase_M16_C) | Peptidase M16 inactive domain | Peptidase M16 consists of two structurally related domains. One is the active peptidase, whereas the other is inactive. The two domains hold the substrate like a clamp [1]. | Domain |
| B, L [auth M] | PF02790 | Cytochrome C oxidase subunit II, transmembrane domain (COX2_TM) | Cytochrome C oxidase subunit II, transmembrane domain | - | Family |
| B, L [auth M] | PF00675 | Insulinase (Peptidase family M16) (Peptidase_M16) | Insulinase (Peptidase family M16) | - | Family |
| J, T [auth U] | PF09796 | Ubiquinol-cytochrome-c reductase complex subunit (QCR10) (QCR10) | Ubiquinol-cytochrome-c reductase complex subunit (QCR10) | - | Family |
| J, T [auth U] | PF02297 | Cytochrome oxidase c subunit VIb (COX6B) | Cytochrome oxidase c subunit VIb | Cytochrome c oxidase, a 13 sub-unit complex, EC:1.9.3.1 is the terminal oxidase in the mitochondrial electron transport chain. This family is composed of the potentially heme-binding subunit IVb of the oxidase. | Domain |
| A, K [auth L] | PF05193 | Peptidase M16 inactive domain (Peptidase_M16_C) | Peptidase M16 inactive domain | Peptidase M16 consists of two structurally related domains. One is the active peptidase, whereas the other is inactive. The two domains hold the substrate like a clamp [1]. | Domain |
| A, K [auth L] | PF04588 | Hypoxia induced protein conserved region (HIG_1_N) | Hypoxia induced protein conserved region | - | Family |
| A, K [auth L] | PF00675 | Insulinase (Peptidase family M16) (Peptidase_M16) | Insulinase (Peptidase family M16) | - | Family |
| A, K [auth L] | PF00115 | Cytochrome C and Quinol oxidase polypeptide I (COX1) | Cytochrome C and Quinol oxidase polypeptide I | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
| Chains | External Link | Comment |
|---|---|---|
| PDBTM | Annotated as membrane protein by PDBTM |














