Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF00675,PF05193e8q1bA1 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: PF00675,PF05193ECOD (1.6)
APF05193e8q1bA2 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: PF05193ECOD (1.6)
K [auth L]PF00675,PF05193e8q1bL2 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: PF00675,PF05193ECOD (1.6)
K [auth L]PF05193e8q1bL1 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: PF05193ECOD (1.6)
JPF09796e8q1bJ1 A: extended segmentsX: Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: PF09796ECOD (1.6)
T [auth U]PF09796e8q1bU1 A: extended segmentsX: Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: PF09796ECOD (1.6)
U [auth a]PF00115e8q1ba1 A: alpha superhelicesX: Cytochrome c oxidase subunit I-likeH: Cytochrome c oxidase subunit I-like (From Topology)T: Cytochrome c oxidase subunit I-likeF: PF00115ECOD (1.6)
V [auth b]PF00116e8q1bb1 A: beta sandwichesX: Cupredoxin-likeH: Cupredoxin-related (From Topology)T: Cupredoxin-relatedF: PF00116ECOD (1.6)
V [auth b]PF02790e8q1bb2 A: extended segmentsX: Cytochrome c oxidase subunit II-like, transmembrane region (From Topology)H: Cytochrome c oxidase subunit II-like, transmembrane region (From Topology)T: Cytochrome c oxidase subunit II-like, transmembrane regionF: PF02790ECOD (1.6)
W [auth c]PF00510e8q1bc1 A: alpha bundlesX: Cytochrome c oxidase subunit III-like (From Topology)H: Cytochrome c oxidase subunit III-like (From Topology)T: Cytochrome c oxidase subunit III-likeF: PF00510ECOD (1.6)
X [auth d]PF01215e8q1bd1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Cytochrome c oxidase Subunit FF: PF01215ECOD (1.6)
Y [auth e]PF02936e8q1be1 A: extended segmentsX: Mitochondrial cytochrome c oxidase subunit IV (From Topology)H: Mitochondrial cytochrome c oxidase subunit IV (From Topology)T: Mitochondrial cytochrome c oxidase subunit IVF: PF02936ECOD (1.6)
Z [auth f]PF02284e8q1bf1 A: alpha superhelicesX: Repetitive alpha hairpinsH: Cytochrome c oxidase subunit E (From Topology)T: Cytochrome c oxidase subunit EF: PF02284ECOD (1.6)
AA [auth g]PF02238e8q1bg1 A: extended segmentsX: Mitochondrial cytochrome c oxidase subunit VIIa (From Topology)H: Mitochondrial cytochrome c oxidase subunit VIIa (From Topology)T: Mitochondrial cytochrome c oxidase subunit VIIaF: PF02238ECOD (1.6)
BA [auth h]PF02935e8q1bh1 A: extended segmentsX: Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) (From Topology)H: Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) (From Topology)T: Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)F: PF02935ECOD (1.6)
BF_UNCLASSIFIEDe8q1bB1 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: F_UNCLASSIFIEDECOD (1.6)
BPF00675e8q1bB2 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: PF00675ECOD (1.6)
L [auth M]F_UNCLASSIFIEDe8q1bM1 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: F_UNCLASSIFIEDECOD (1.6)
L [auth M]PF00675e8q1bM2 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: PF00675ECOD (1.6)
DA [auth j]PF02297e8q1bj1 A: few secondary structure elementsX: Cytochrome c oxidase subunit h (From Topology)H: Cytochrome c oxidase subunit h (From Topology)T: Cytochrome c oxidase subunit hF: PF02297ECOD (1.6)
EA [auth k]PF02046e8q1bk1 A: extended segmentsX: Mitochondrial cytochrome c oxidase subunit VIa (From Topology)H: Mitochondrial cytochrome c oxidase subunit VIa (From Topology)T: Mitochondrial cytochrome c oxidase subunit VIaF: PF02046ECOD (1.6)
FA [auth l]PF04588e8q1bl1 A: extended segmentsX: HIG1 domain family member 1A (From Topology)H: HIG1 domain family member 1A (From Topology)T: HIG1 domain family member 1AF: PF04588ECOD (1.6)
CPF00032e8q1bC2 A: alpha bundlesX: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: PF00032ECOD (1.6)
CPF00033e8q1bC1 A: alpha bundlesX: Transmembrane heme-binding four-helical bundle (From Homology)H: Transmembrane heme-binding four-helical bundleT: Transmembrane di-heme cytochromesF: PF00033ECOD (1.6)
M [auth N]PF00032e8q1bN1 A: alpha bundlesX: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: PF00032ECOD (1.6)
M [auth N]PF00033e8q1bN2 A: alpha bundlesX: Transmembrane heme-binding four-helical bundle (From Homology)H: Transmembrane heme-binding four-helical bundleT: Transmembrane di-heme cytochromesF: PF00033ECOD (1.6)
DPF02167e8q1bD1 A: alpha arraysX: Cytochrome c-likeH: Cytochrome c (From Topology)T: Cytochrome cF: PF02167ECOD (1.6)
DPF02167e8q1bD2 A: extended segmentsX: cytochrome c1 transmembrane anchor (From Topology)H: cytochrome c1 transmembrane anchor (From Topology)T: cytochrome c1 transmembrane anchorF: PF02167ECOD (1.6)
N [auth O]PF02167e8q1bO2 A: alpha arraysX: Cytochrome c-likeH: Cytochrome c (From Topology)T: Cytochrome cF: PF02167ECOD (1.6)
N [auth O]PF02167e8q1bO1 A: extended segmentsX: cytochrome c1 transmembrane anchor (From Topology)H: cytochrome c1 transmembrane anchor (From Topology)T: cytochrome c1 transmembrane anchorF: PF02167ECOD (1.6)
EF_UNCLASSIFIEDe8q1bE1 A: beta sandwichesX: ISP domain (From Topology)H: ISP domain (From Topology)T: ISP domainF: F_UNCLASSIFIEDECOD (1.6)
EPF00355e8q1bE2 A: few secondary structure elementsX: Trm112p-like (From Topology)H: Trm112p-like (From Topology)T: Trm112p-likeF: PF00355ECOD (1.6)
EPF02921e8q1bE3 A: extended segmentsX: iron-sulfur subunit (ISP) transmembrane anchor (From Topology)H: iron-sulfur subunit (ISP) transmembrane anchor (From Topology)T: iron-sulfur subunit (ISP) transmembrane anchorF: PF02921ECOD (1.6)
O [auth P]F_UNCLASSIFIEDe8q1bP2 A: beta sandwichesX: ISP domain (From Topology)H: ISP domain (From Topology)T: ISP domainF: F_UNCLASSIFIEDECOD (1.6)
O [auth P]PF00355e8q1bP3 A: few secondary structure elementsX: Trm112p-like (From Topology)H: Trm112p-like (From Topology)T: Trm112p-likeF: PF00355ECOD (1.6)
O [auth P]PF02921e8q1bP1 A: extended segmentsX: iron-sulfur subunit (ISP) transmembrane anchor (From Topology)H: iron-sulfur subunit (ISP) transmembrane anchor (From Topology)T: iron-sulfur subunit (ISP) transmembrane anchorF: PF02921ECOD (1.6)
FPF02320e8q1bF1 A: alpha bundlesX: cytochrome bc1 complex 11 kDa protein-likeH: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: PF02320ECOD (1.6)
P [auth Q]PF02320e8q1bQ1 A: alpha bundlesX: cytochrome bc1 complex 11 kDa protein-likeH: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: PF02320ECOD (1.6)
GPF02271e8q1bG1 A: alpha arraysX: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: PF02271ECOD (1.6)
Q [auth R]PF02271e8q1bR1 A: alpha arraysX: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: PF02271ECOD (1.6)
HPF02939e8q1bH1 A: extended segmentsX: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: PF02939ECOD (1.6)
R [auth S]PF02939e8q1bS1 A: extended segmentsX: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: PF02939ECOD (1.6)
IPF05365e8q1bI1 A: extended segmentsX: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: PF05365ECOD (1.6)
S [auth T]PF05365e8q1bT1 A: extended segmentsX: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: PF05365ECOD (1.6)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
K [auth L]
Probable mitochondrial-processing peptidase subunit beta
J,
T [auth U]
Cytochrome b-c1 complex subunit 10-
U [auth a]Cytochrome c oxidase subunit 1
V [auth b]Cytochrome c oxidase subunit 2
W [auth c]Cytochrome c oxidase subunit 3
X [auth d]Cytochrome c oxidase subunit 4, mitochondrial
Y [auth e]Cytochrome c oxidase polypeptide 5, mitochondrial
Z [auth f]Cytochrome c oxidase subunit 6, mitochondrial
AA [auth g]Cytochrome c oxidase subunit 7
BA [auth h]Cytochrome c oxidase polypeptide VIII, mitochondrial
CA [auth i]Cytochrome c oxidase subunit 9, mitochondrial
B,
L [auth M]
Cytochrome b-c1 complex subunit 2, mitochondrial
DA [auth j]Cytochrome c oxidase subunit 12, mitochondrial-
EA [auth k]Cytochrome c oxidase subunit 13, mitochondrial
FA [auth l]Respiratory supercomplex factor 2 homolog C1565.01-
GA [auth m]Unknown polypeptide---
C,
M [auth N]
Cytochrome b
D,
N [auth O]
Cytochrome c1, heme protein, mitochondrial
E,
O [auth P]
Cytochrome b-c1 complex subunit Rieske, mitochondrial
F,
P [auth Q]
Cytochrome b-c1 complex subunit 6-
G,
Q [auth R]
Cytochrome b-c1 complex subunit 7-
H,
R [auth S]
Cytochrome b-c1 complex subunit 8-
I,
S [auth T]
Cytochrome b-c1 complex subunit 9-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A,
K [auth L]
IPR007863Peptidase M16, C-terminalDomain
A,
K [auth L]
IPR011765Peptidase M16, N-terminalDomain
A,
K [auth L]
IPR011249Metalloenzyme, LuxS/M16 peptidase-likeHomologous Superfamily
A,
K [auth L]
IPR001431Peptidase M16, zinc-binding siteBinding Site
J,
T [auth U]
IPR019182Cytochrome b-c1 complex subunit 10, fungiFamily
U [auth a]IPR036927Cytochrome c oxidase-like, subunit I superfamilyHomologous Superfamily
U [auth a]IPR000883Cytochrome c oxidase subunit IFamily
U [auth a]IPR023615Cytochrome c oxidase, subunit I, copper-binding siteBinding Site
U [auth a]IPR023616Cytochrome c oxidase-like, subunit I domainDomain
U [auth a]IPR033944Cytochrome c oxidase subunit I domainDomain
V [auth b]IPR011759Cytochrome C oxidase subunit II, transmembrane domainDomain
V [auth b]IPR036257Cytochrome C oxidase subunit II, transmembrane domain superfamilyHomologous Superfamily
V [auth b]IPR034210Cytochrome c oxidase subunit 2, C-terminalDomain
V [auth b]IPR045187Cytochrome c/quinol oxidase subunit IIFamily
V [auth b]IPR002429Cytochrome c oxidase subunit II-like C-terminalDomain
V [auth b]IPR008972CupredoxinHomologous Superfamily
V [auth b]IPR001505Copper centre Cu(A)Binding Site
V [auth b]IPR014222Cytochrome c oxidase, subunit IIDomain
W [auth c]IPR035973Cytochrome c oxidase subunit III-like superfamilyHomologous Superfamily
W [auth c]IPR013833Cytochrome c oxidase, subunit III, 4-helical bundleHomologous Superfamily
W [auth c]IPR000298Cytochrome c oxidase subunit III-likeDomain
W [auth c]IPR033945Cytochrome c oxidase subunit III domainDomain
W [auth c]IPR024791Cytochrome c oxidase subunit IIIFamily
X [auth d]IPR002124Cytochrome c oxidase, subunit VbFamily
X [auth d]IPR036972Cytochrome c oxidase, subunit Vb superfamilyHomologous Superfamily
Y [auth e]IPR004203Cytochrome c oxidase subunit IV familyFamily
Y [auth e]IPR036639Cytochrome c oxidase subunit IV superfamilyHomologous Superfamily
Z [auth f]IPR003204Cytochrome c oxidase, subunit Va/VIFamily
Z [auth f]IPR036545Cytochrome c oxidase, subunit Va/VI superfamilyHomologous Superfamily
AA [auth g]IPR039296Predicted cytochrome c oxidase subunit VIIFamily
AA [auth g]IPR039297Cytochrome c oxidase subunit VIIFamily
BA [auth h]IPR036636Cytochrome c oxidase subunit VIIc superfamilyHomologous Superfamily
BA [auth h]IPR004202Cytochrome c oxidase subunit VIIcFamily
CA [auth i]IPR014368Cytochrome c oxidase, subunit VIIa, fungalFamily
B,
L [auth M]
IPR007863Peptidase M16, C-terminalDomain
B,
L [auth M]
IPR011765Peptidase M16, N-terminalDomain
B,
L [auth M]
IPR011249Metalloenzyme, LuxS/M16 peptidase-likeHomologous Superfamily
DA [auth j]IPR036549Cytochrome c oxidase, subunit VIb superfamilyHomologous Superfamily
DA [auth j]IPR048280Cytochrome oxidase c subunit VIb-likeFamily
DA [auth j]IPR003213Cytochrome c oxidase, subunit VIbFamily
EA [auth k]IPR018507Cytochrome c oxidase, subunit VIa, conserved siteConserved Site
EA [auth k]IPR036418Cytochrome c oxidase, subunit VIa superfamilyHomologous Superfamily
EA [auth k]IPR001349Cytochrome c oxidase, subunit VIaFamily
FA [auth l]IPR007667Hypoxia induced protein, domainDomain
FA [auth l]IPR040153Respiratory supercomplex factor 2, mitochondrialFamily
C,
M [auth N]
IPR036150Cytochrome b/b6, C-terminal domain superfamilyHomologous Superfamily
C,
M [auth N]
IPR027387Cytochrome b/b6-like domain superfamilyHomologous Superfamily
C,
M [auth N]
IPR016174Di-haem cytochrome, transmembraneHomologous Superfamily
C,
M [auth N]
IPR005798Cytochrome b/b6, C-terminalDomain
C,
M [auth N]
IPR048259Cytochrome b/b6, N-terminal domain, eukaryotic/bacterialDomain
C,
M [auth N]
IPR030689Cytochrome bFamily
C,
M [auth N]
IPR005797Cytochrome b/b6, N-terminal domainDomain
D,
N [auth O]
IPR036909Cytochrome c-like domain superfamilyHomologous Superfamily
D,
N [auth O]
IPR002326Cytochrome c1Family
D,
N [auth O]
IPR009056Cytochrome c-like domainDomain
D,
N [auth O]
IPR021157Cytochrome c1, transmembrane anchor, C-terminalHomologous Superfamily
E,
O [auth P]
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyHomologous Superfamily
E,
O [auth P]
IPR014349Rieske iron-sulphur proteinFamily
E,
O [auth P]
IPR004192Cytochrome b-c1 complex subunit Rieske, transmembrane domainDomain
E,
O [auth P]
IPR017941Rieske [2Fe-2S] iron-sulphur domainDomain
E,
O [auth P]
IPR005805Rieske iron-sulphur protein, C-terminalDomain
E,
O [auth P]
IPR037008Cytochrome bc1 complex subunit Rieske, transmembrane domain superfamilyHomologous Superfamily
E,
O [auth P]
IPR006317Ubiquinol-cytochrome c reductase, iron-sulphur subunitDomain
F,
P [auth Q]
IPR023184Ubiquinol-cytochrome C reductase hinge domainDomain
F,
P [auth Q]
IPR036811Ubiquinol-cytochrome C reductase hinge domain superfamilyHomologous Superfamily
G,
Q [auth R]
IPR003197Cytochrome b-c1 complex subunit 7Family
G,
Q [auth R]
IPR036544Cytochrome b-c1 complex subunit 7 superfamilyHomologous Superfamily
H,
R [auth S]
IPR004205Cytochrome b-c1 complex subunit 8Family
H,
R [auth S]
IPR036642Cytochrome b-c1 complex subunit 8 superfamilyHomologous Superfamily
I,
S [auth T]
IPR008027Cytochrome b-c1 complex subunit 9Family
I,
S [auth T]
IPR036656Cytochrome b-c1 complex subunit 9 superfamilyHomologous Superfamily