8PYS | pdb_00008pys

Cryo-EM structure of the DyP peroxidase-loaded encapsulin nanocompartment from Mycobacterium tuberculosis with icosahedral symmetry imposed.

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
ZA [auth z]	HIG_1_N	e8pysz1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
Z	HIG_1_N	e8pysZ1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
YA [auth y]	HIG_1_N	e8pysy1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
Y	HIG_1_N	e8pysY1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
XA [auth x]	HIG_1_N	e8pysx1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
X	HIG_1_N	e8pysX1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
WA [auth w]	HIG_1_N	e8pysw1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
W	HIG_1_N	e8pysW1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
VA [auth v]	HIG_1_N	e8pysv1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
V	HIG_1_N	e8pysV1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
UA [auth u]	HIG_1_N	e8pysu1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
U	HIG_1_N	e8pysU1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
TA [auth t]	HIG_1_N	e8pyst1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
T	HIG_1_N	e8pysT1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
SA [auth s]	HIG_1_N	e8pyss1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
S	HIG_1_N	e8pysS1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
RA [auth r]	HIG_1_N	e8pysr1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
R	HIG_1_N	e8pysR1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
QA [auth q]	HIG_1_N	e8pysq1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
Q	HIG_1_N	e8pysQ1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
PA [auth p]	HIG_1_N	e8pysp1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
P	HIG_1_N	e8pysP1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
OA [auth o]	HIG_1_N	e8pyso1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
O	HIG_1_N	e8pysO1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
NA [auth n]	HIG_1_N	e8pysn1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
N	HIG_1_N	e8pysN1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
MA [auth m]	HIG_1_N	e8pysm1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
M	HIG_1_N	e8pysM1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
LA [auth l]	HIG_1_N	e8pysl1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
L	HIG_1_N	e8pysL1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
KA [auth k]	HIG_1_N	e8pysk1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
K	HIG_1_N	e8pysK1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
JA [auth j]	HIG_1_N	e8pysj1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
J	HIG_1_N	e8pysJ1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
IA [auth i]	HIG_1_N	e8pysi1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
I	HIG_1_N	e8pysI1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
HB [auth 7]	HIG_1_N	e8pys71	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
HA [auth h]	HIG_1_N	e8pysh1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
H	HIG_1_N	e8pysH1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
GB [auth 6]	HIG_1_N	e8pys61	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
GA [auth g]	HIG_1_N	e8pysg1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
G	HIG_1_N	e8pysG1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
FB [auth 5]	HIG_1_N	e8pys51	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
FA [auth f]	HIG_1_N	e8pysf1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
F	HIG_1_N	e8pysF1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
EB [auth 4]	HIG_1_N	e8pys41	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
EA [auth e]	HIG_1_N	e8pyse1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
E	HIG_1_N	e8pysE1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
DB [auth 3]	HIG_1_N	e8pys31	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
DA [auth d]	HIG_1_N	e8pysd1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
D	HIG_1_N	e8pysD1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
CB [auth 2]	HIG_1_N	e8pys21	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
CA [auth c]	HIG_1_N	e8pysc1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
C	HIG_1_N	e8pysC1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
BB [auth 1]	HIG_1_N	e8pys11	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
BA [auth b]	HIG_1_N	e8pysb1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
B	HIG_1_N	e8pysB1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
AB [auth 0]	HIG_1_N	e8pys01	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
AA [auth a]	HIG_1_N	e8pysa1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: HIG_1_N	ECOD (v294.1)
A	WD40,CAF1C_H4-bd	e8pysA1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: WD40,CAF1C_H4-bd	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, AA [auth a], AB [auth 0], B, BA [auth b], A, AA [auth a], AB [auth 0], B, BA [auth b], BB [auth 1], C, CA [auth c], CB [auth 2], D, DA [auth d], DB [auth 3], E, EA [auth e], EB [auth 4], F, FA [auth f], FB [auth 5], G, GA [auth g], GB [auth 6], H, HA [auth h], HB [auth 7], I, IA [auth i], J, JA [auth j], K, KA [auth k], L, LA [auth l], M, MA [auth m], N, NA [auth n], O, OA [auth o], P, PA [auth p], Q, QA [auth q], R, RA [auth r], S, SA [auth s], T, TA [auth t], U, UA [auth u], V, VA [auth v], W, WA [auth w], X, XA [auth x], Y, YA [auth y], Z, ZA [auth z]	PF04454	Encapsulating protein for peroxidase (Linocin_M18)	Encapsulating protein for peroxidase	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, AA [auth a], AB [auth 0], B, BA [auth b], A, AA [auth a], AB [auth 0], B, BA [auth b], BB [auth 1], C, CA [auth c], CB [auth 2], D, DA [auth d], DB [auth 3], E, EA [auth e], EB [auth 4], F, FA [auth f], FB [auth 5], G, GA [auth g], GB [auth 6], H, HA [auth h], HB [auth 7], I, IA [auth i], J, JA [auth j], K, KA [auth k], L, LA [auth l], M, MA [auth m], N, NA [auth n], O, OA [auth o], P, PA [auth p], Q, QA [auth q], R, RA [auth r], S, SA [auth s], T, TA [auth t], U, UA [auth u], V, VA [auth v], W, WA [auth w], X, XA [auth x], Y, YA [auth y], Z, ZA [auth z]	29 kDa antigen CFP29	-	-	cell periphery cellular anatomical structure plasma membrane membrane extracellular region intracellular organelle intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle encapsulin nanocompartment

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, AA [auth a], AB [auth 0], B, BA [auth b], A, AA [auth a], AB [auth 0], B, BA [auth b], BB [auth 1], C, CA [auth c], CB [auth 2], D, DA [auth d], DB [auth 3], E, EA [auth e], EB [auth 4], F, FA [auth f], FB [auth 5], G, GA [auth g], GB [auth 6], H, HA [auth h], HB [auth 7], I, IA [auth i], J, JA [auth j], K, KA [auth k], L, LA [auth l], M, MA [auth m], N, NA [auth n], O, OA [auth o], P, PA [auth p], Q, QA [auth q], R, RA [auth r], S, SA [auth s], T, TA [auth t], U, UA [auth u], V, VA [auth v], W, WA [auth w], X, XA [auth x], Y, YA [auth y], Z, ZA [auth z]	IPR007544	Type 1 encapsulin shell protein	Family
A, AA [auth a], AB [auth 0], B, BA [auth b], A, AA [auth a], AB [auth 0], B, BA [auth b], BB [auth 1], C, CA [auth c], CB [auth 2], D, DA [auth d], DB [auth 3], E, EA [auth e], EB [auth 4], F, FA [auth f], FB [auth 5], G, GA [auth g], GB [auth 6], H, HA [auth h], HB [auth 7], I, IA [auth i], J, JA [auth j], K, KA [auth k], L, LA [auth l], M, MA [auth m], N, NA [auth n], O, OA [auth o], P, PA [auth p], Q, QA [auth q], R, RA [auth r], S, SA [auth s], T, TA [auth t], U, UA [auth u], V, VA [auth v], W, WA [auth w], X, XA [auth x], Y, YA [auth y], Z, ZA [auth z]	IPR051429	Encapsulin nanocompartment	Family